BLASTX nr result

ID: Ophiopogon26_contig00046908 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00046908
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY50836.1| hypothetical protein RhiirA4_272180 [Rhizophagus ...    52   3e-06

>gb|PKY50836.1| hypothetical protein RhiirA4_272180 [Rhizophagus irregularis]
          Length = 58

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 32/58 (55%)
 Frame = -3

Query: 181 MDYIVIITXXXXXXXXXXXXXXXXXXXXXXXXSTISYYSLPILFTAPSPFPFASTLVI 8
           MD+IVIIT                        S I+YY LP+LFTAPSPFPFASTLVI
Sbjct: 1   MDFIVIITSLFPFSFIPRPFVLSLPLPSLTFSSNIAYYFLPVLFTAPSPFPFASTLVI 58