BLASTX nr result

ID: Ophiopogon26_contig00046861 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00046861
         (456 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY14267.1| hypothetical protein RhiirB3_519470 [Rhizophagus ...    45   1e-08
gb|EXX73814.1| hypothetical protein RirG_057000 [Rhizophagus irr...    46   1e-06

>gb|PKY14267.1| hypothetical protein RhiirB3_519470 [Rhizophagus irregularis]
          Length = 209

 Score = 45.4 bits (106), Expect(2) = 1e-08
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 136 MRILPRFFIYANELLNYSILYKK 68
           M+ILPRFFIYANELLN SILYKK
Sbjct: 1   MKILPRFFIYANELLNNSILYKK 23



 Score = 41.2 bits (95), Expect(2) = 1e-08
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -1

Query: 72 KKLLSNMQSIDSLRELNAKLLAE 4
          KKLLSNMQSI+SL ELNAKLLAE
Sbjct: 22 KKLLSNMQSIESLGELNAKLLAE 44


>gb|EXX73814.1| hypothetical protein RirG_057000 [Rhizophagus irregularis DAOM
           197198w]
          Length = 242

 Score = 45.8 bits (107), Expect(2) = 1e-06
 Identities = 24/42 (57%), Positives = 32/42 (76%)
 Frame = -1

Query: 126 YLVFLSMLTNF*IIPSYIKKLLSNMQSIDSLRELNAKLLAEI 1
           + ++ + L N+    +  KKLLSN+QSIDSLRELN+KLLAEI
Sbjct: 23  FFIYANRLLNY---STLYKKLLSNIQSIDSLRELNSKLLAEI 61



 Score = 34.3 bits (77), Expect(2) = 1e-06
 Identities = 21/37 (56%), Positives = 22/37 (59%)
 Frame = -2

Query: 224 IETPFHFVKQVYVLPNLVIYFLHQ*ISNSDEDITSFF 114
           +ET FHFV   YVLPN           NSDEDITSFF
Sbjct: 1   METLFHFV---YVLPNF----------NSDEDITSFF 24


Top