BLASTX nr result

ID: Ophiopogon26_contig00046502 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00046502
         (744 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC29756.1| mitochondrial carrier protein [Rhizophagus irreg...    57   4e-12
dbj|GBC29757.1| mitochondrial carrier protein [Rhizophagus irreg...    63   3e-08
gb|EXX51723.1| Ort1p [Rhizophagus irregularis DAOM 197198w]            54   2e-06

>dbj|GBC29756.1| mitochondrial carrier protein [Rhizophagus irregularis DAOM 181602]
          Length = 188

 Score = 57.4 bits (137), Expect(2) = 4e-12
 Identities = 34/64 (53%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = +1

Query: 43  FLSSYNNVLSSFRPSDARNFGYFLDGQKTR*NSIVF-WTRGLFNGFRRIFQGGHGQSFGV 219
           F  S  N LSSFRPSDAR F       K   N++ F     L +GFRRIFQ GH QSFG+
Sbjct: 2   FRISCGNGLSSFRPSDAREFWLLFRWPK---NALKFDGFLDLLSGFRRIFQAGHSQSFGI 58

Query: 220 FGRV 231
           FGR+
Sbjct: 59  FGRL 62



 Score = 42.4 bits (98), Expect(2) = 4e-12
 Identities = 23/28 (82%), Positives = 23/28 (82%), Gaps = 4/28 (14%)
 Frame = +2

Query: 320 TGLRTRGKLDFGAFDA*E----FRSLVD 391
           TGLRTRGKLDFGAFDA E    FRSLVD
Sbjct: 65  TGLRTRGKLDFGAFDASERRFGFRSLVD 92


>dbj|GBC29757.1| mitochondrial carrier protein [Rhizophagus irregularis DAOM 181602]
          Length = 202

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 45/105 (42%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
 Frame = +3

Query: 75  VSAFRRS---EFWLLFRWPKNALKFDSFLDARSL*RVSADLSGRTRSILWSIWTCEDSVR 245
           +S+FR S   EFWLLFRWPKNALKFD FLD          LSG  R     +   E    
Sbjct: 10  LSSFRPSDAREFWLLFRWPKNALKFDGFLDL---------LSGFRRIFQAGLNPLE---- 56

Query: 246 GVLXXXXXXXXXXXXXXXXXXXCKLPVFGRVENSTSEHLTHESFG 380
                                  +LPVFGRVENSTSEHLT +  G
Sbjct: 57  ------------------YLDVYRLPVFGRVENSTSEHLTRKVRG 83


>gb|EXX51723.1| Ort1p [Rhizophagus irregularis DAOM 197198w]
          Length = 217

 Score = 53.9 bits (128), Expect(2) = 2e-06
 Identities = 33/73 (45%), Positives = 38/73 (52%)
 Frame = +3

Query: 162 SL*RVSADLSGRTRSILWSIWTCEDSVRGVLXXXXXXXXXXXXXXXXXXXCKLPVFGRVE 341
           SL  + ADLSGRT+SILW+IWT                             +LPVFGRVE
Sbjct: 14  SLIGIPADLSGRTQSILWNIWTY----------------------------RLPVFGRVE 45

Query: 342 NSTSEHLTHESFG 380
           NSTSEHLT +  G
Sbjct: 46  NSTSEHLTRKVRG 58



 Score = 26.6 bits (57), Expect(2) = 2e-06
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 116 MAKKRVEIR*FSGRAVSL 169
           MAKKRVEIR FSG  + +
Sbjct: 1   MAKKRVEIRWFSGSLIGI 18