BLASTX nr result

ID: Ophiopogon26_contig00046301 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00046301
         (492 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276434.1| UPF0481 protein At3g47200-like [Asparagus of...    63   2e-08
gb|ONK64977.1| uncharacterized protein A4U43_C07F32100 [Asparagu...    63   2e-08
ref|XP_020256171.1| UPF0481 protein At3g47200-like [Asparagus of...    55   1e-05

>ref|XP_020276434.1| UPF0481 protein At3g47200-like [Asparagus officinalis]
          Length = 486

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = -2

Query: 491 SDGNYLADVFIQVKKYHGSSWRRWRAQLIHNYFIHPWA 378
           SD NYL DVF++VKKYH S W RWRA LI +YF +PWA
Sbjct: 420 SDMNYLGDVFVKVKKYHESKWHRWRAGLIRDYFSNPWA 457


>gb|ONK64977.1| uncharacterized protein A4U43_C07F32100 [Asparagus officinalis]
          Length = 621

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = -2

Query: 491 SDGNYLADVFIQVKKYHGSSWRRWRAQLIHNYFIHPWA 378
           SD NYL DVF++VKKYH S W RWRA LI +YF +PWA
Sbjct: 420 SDMNYLGDVFVKVKKYHESKWHRWRAGLIRDYFSNPWA 457


>ref|XP_020256171.1| UPF0481 protein At3g47200-like [Asparagus officinalis]
          Length = 506

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/37 (64%), Positives = 26/37 (70%)
 Frame = -2

Query: 491 SDGNYLADVFIQVKKYHGSSWRRWRAQLIHNYFIHPW 381
           SDGNYLAD+F  VKK H S WRRWRA L   YF + W
Sbjct: 437 SDGNYLADIFTNVKKDHESKWRRWRAGLARVYFSNYW 473


Top