BLASTX nr result

ID: Ophiopogon26_contig00046224 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00046224
         (549 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX52366.1| hypothetical protein RirG_253700 [Rhizophagus irr...   111   2e-28
dbj|GBC44074.1| hypothetical protein RIR_2693900 [Rhizophagus ir...    61   1e-16

>gb|EXX52366.1| hypothetical protein RirG_253700 [Rhizophagus irregularis DAOM
           197198w]
          Length = 107

 Score =  111 bits (277), Expect = 2e-28
 Identities = 56/82 (68%), Positives = 58/82 (70%)
 Frame = +1

Query: 157 NLPTQHQNLAPAVRPGGPLHIIYRMQAGXXXXXXXXXXXXXXYCDAQASVTPSLSNLAAE 336
           NLPTQHQ +APAVRPGGP H IYRMQA               YCDA+ASVTPSLSNLAAE
Sbjct: 26  NLPTQHQTIAPAVRPGGPSHNIYRMQAASRQPNTSRRIRRRRYCDARASVTPSLSNLAAE 85

Query: 337 LNSQESTGIPLVDDFFAGVSFY 402
           LN QESTG PLVD  F G SFY
Sbjct: 86  LNPQESTGNPLVDGLFGGASFY 107


>dbj|GBC44074.1| hypothetical protein RIR_2693900 [Rhizophagus irregularis DAOM
           181602]
          Length = 98

 Score = 60.8 bits (146), Expect(2) = 1e-16
 Identities = 29/49 (59%), Positives = 31/49 (63%)
 Frame = +1

Query: 157 NLPTQHQNLAPAVRPGGPLHIIYRMQAGXXXXXXXXXXXXXXYCDAQAS 303
           NLPTQHQ +APAVRPGGP H IYRMQA               YCDA+AS
Sbjct: 26  NLPTQHQTIAPAVRPGGPSHNIYRMQAASRQPNTSRRIRRRRYCDARAS 74



 Score = 53.1 bits (126), Expect(2) = 1e-16
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +2

Query: 404 TNKSEKPHFIHYGISFFNIVHFINV 478
           +NKSEK HFIHYGISFFNIVHFINV
Sbjct: 74  SNKSEKSHFIHYGISFFNIVHFINV 98


Top