BLASTX nr result

ID: Ophiopogon26_contig00045264 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00045264
         (480 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY14787.1| hypothetical protein RhiirB3_380388 [Rhizophagus ...    55   8e-10
gb|PKY48674.1| hypothetical protein RhiirA4_422353 [Rhizophagus ...    55   4e-09
gb|EXX53497.1| hypothetical protein RirG_243370 [Rhizophagus irr...    49   6e-07

>gb|PKY14787.1| hypothetical protein RhiirB3_380388 [Rhizophagus irregularis]
          Length = 267

 Score = 55.1 bits (131), Expect(2) = 8e-10
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -1

Query: 450 SENYVESVLLQIIFCHEHLLAFSQSDQ 370
           SENYVES LLQIIFCHEHLLAFSQSDQ
Sbjct: 48  SENYVESGLLQIIFCHEHLLAFSQSDQ 74



 Score = 35.8 bits (81), Expect(2) = 8e-10
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -2

Query: 257 FCHEHLLAFSQSDQRST*KLLYYN 186
           FCHEHLLAFSQSDQ     L+ Y+
Sbjct: 86  FCHEHLLAFSQSDQGFKLALMVYD 109


>gb|PKY48674.1| hypothetical protein RhiirA4_422353 [Rhizophagus irregularis]
          Length = 115

 Score = 55.1 bits (131), Expect(2) = 4e-09
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = -1

Query: 450 SENYVESVLLQIIFCHEHLLAFSQSDQ 370
           SENYVES LLQIIFCHEHLLAFSQSDQ
Sbjct: 48  SENYVESGLLQIIFCHEHLLAFSQSDQ 74



 Score = 33.5 bits (75), Expect(2) = 4e-09
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -3

Query: 385 FTIRPEEYLETVILPIIICHEHLRAFSHS 299
           F+   +EY E V + II CHEHL AFS S
Sbjct: 69  FSQSDQEYDECVSVHIIFCHEHLLAFSQS 97


>gb|EXX53497.1| hypothetical protein RirG_243370 [Rhizophagus irregularis DAOM
           197198w]
          Length = 54

 Score = 48.5 bits (114), Expect(2) = 6e-07
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -3

Query: 385 FTIRPEEYLETVILPIIICHEHLRAFSHS 299
           F I+  EYLETV+LPIII HEHLRAFSHS
Sbjct: 26  FQIQDLEYLETVMLPIIIWHEHLRAFSHS 54



 Score = 32.7 bits (73), Expect(2) = 6e-07
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2

Query: 446 RTTLKAFCYKSFFVMNICSLFHNQ 375
           R+T    CY+S+FVMNIC+ F  Q
Sbjct: 6   RSTCNLVCYQSYFVMNICARFQIQ 29


Top