BLASTX nr result

ID: Ophiopogon26_contig00044484 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00044484
         (378 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC00728.1| hypothetical protein RhiirA5_365488 [Rhizophagus ...   118   2e-31
gb|PKY55195.1| hypothetical protein RhiirA4_410359 [Rhizophagus ...   116   7e-31
dbj|GBC31651.1| RNA polymerase II transcription termination fact...   118   4e-29

>gb|PKC00728.1| hypothetical protein RhiirA5_365488 [Rhizophagus irregularis]
 gb|PKK63646.1| hypothetical protein RhiirC2_757973 [Rhizophagus irregularis]
 gb|PKY30794.1| hypothetical protein RhiirB3_419069 [Rhizophagus irregularis]
          Length = 147

 Score =  118 bits (295), Expect = 2e-31
 Identities = 60/76 (78%), Positives = 60/76 (78%)
 Frame = -1

Query: 378 NNNSVYDPTSHLILPPTSFAADILPPSETQLFGDSLINNYLQLPYQTXXXXXXXXXXXXX 199
           NNNSVYDPTSHLILPPTSFAADILPPSETQLFGDSLINNYLQLPYQT             
Sbjct: 72  NNNSVYDPTSHLILPPTSFAADILPPSETQLFGDSLINNYLQLPYQTTSISSSISNSPAP 131

Query: 198 XXXSDEHSDPLVSADT 151
              SDEHSDPLVSADT
Sbjct: 132 SNTSDEHSDPLVSADT 147


>gb|PKY55195.1| hypothetical protein RhiirA4_410359 [Rhizophagus irregularis]
          Length = 147

 Score =  116 bits (291), Expect = 7e-31
 Identities = 59/76 (77%), Positives = 60/76 (78%)
 Frame = -1

Query: 378 NNNSVYDPTSHLILPPTSFAADILPPSETQLFGDSLINNYLQLPYQTXXXXXXXXXXXXX 199
           NNNSVYDPTSHLILPPTSFAADILPPSETQLFGDSLINN+LQLPYQT             
Sbjct: 72  NNNSVYDPTSHLILPPTSFAADILPPSETQLFGDSLINNFLQLPYQTTSISSSISNSPAP 131

Query: 198 XXXSDEHSDPLVSADT 151
              SDEHSDPLVSADT
Sbjct: 132 SNTSDEHSDPLVSADT 147


>dbj|GBC31651.1| RNA polymerase II transcription termination factor (predicted)
           [Rhizophagus irregularis DAOM 181602]
 gb|POG74741.1| hypothetical protein GLOIN_2v1572786 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 386

 Score =  118 bits (295), Expect = 4e-29
 Identities = 60/76 (78%), Positives = 60/76 (78%)
 Frame = -1

Query: 378 NNNSVYDPTSHLILPPTSFAADILPPSETQLFGDSLINNYLQLPYQTXXXXXXXXXXXXX 199
           NNNSVYDPTSHLILPPTSFAADILPPSETQLFGDSLINNYLQLPYQT             
Sbjct: 311 NNNSVYDPTSHLILPPTSFAADILPPSETQLFGDSLINNYLQLPYQTTSISSSISNSPAP 370

Query: 198 XXXSDEHSDPLVSADT 151
              SDEHSDPLVSADT
Sbjct: 371 SNTSDEHSDPLVSADT 386


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