BLASTX nr result

ID: Ophiopogon26_contig00044394 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00044394
         (557 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|POG80287.1| hypothetical protein GLOIN_2v1520268 [Rhizophagus...    66   4e-10
gb|EXX80020.1| Pub1p [Rhizophagus irregularis DAOM 197198w] >gi|...    66   1e-09

>gb|POG80287.1| hypothetical protein GLOIN_2v1520268 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 173

 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 31/52 (59%), Positives = 33/52 (63%)
 Frame = +3

Query: 3   RRSRARTPTPGRYYGPPKRRETRKVDRFXXXXXXXXXXXXXXXXXXGYGREP 158
           RR+RARTPTPGRYYGPPKRRE RKVDRF                  GYGR+P
Sbjct: 69  RRARARTPTPGRYYGPPKRREPRKVDRFDPRYEYSRSYDRYERPPRGYGRDP 120


>gb|EXX80020.1| Pub1p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC26091.1| Transformer-2 protein [Rhizophagus irregularis DAOM 181602]
 gb|PKC17893.1| RNA-binding domain-containing protein [Rhizophagus irregularis]
 gb|PKC74098.1| RNA-binding domain-containing protein [Rhizophagus irregularis]
 gb|PKY12353.1| RNA-binding domain-containing protein [Rhizophagus irregularis]
 gb|PKY38611.1| RNA-binding domain-containing protein [Rhizophagus irregularis]
          Length = 259

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 31/52 (59%), Positives = 33/52 (63%)
 Frame = +3

Query: 3   RRSRARTPTPGRYYGPPKRRETRKVDRFXXXXXXXXXXXXXXXXXXGYGREP 158
           RR+RARTPTPGRYYGPPKRRE RKVDRF                  GYGR+P
Sbjct: 155 RRARARTPTPGRYYGPPKRREPRKVDRFDPRYEYSRSYDRYERPPRGYGRDP 206


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