BLASTX nr result

ID: Ophiopogon26_contig00044356 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00044356
         (690 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY39458.1| hypothetical protein RhiirA4_226483 [Rhizophagus ...    44   5e-07

>gb|PKY39458.1| hypothetical protein RhiirA4_226483 [Rhizophagus irregularis]
          Length = 143

 Score = 43.5 bits (101), Expect(2) = 5e-07
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
 Frame = +3

Query: 318 KGHTDFTKLYQKKDDTGSAASHMQEKLHKMLKPFNYIGTLRIHCILPGITNVK------- 476
           K  TD++ LY KK+   +   +++E+L  + + F   G+LRI+ ILPG+   +       
Sbjct: 46  KNSTDWSFLYHKKNGEVTC-KNLKERLDDVRQDFTCQGSLRIYFILPGVAQERTSNQSSR 104

Query: 477 --*GECGVNGNDIILYID 524
              G C    ND+I+YID
Sbjct: 105 SNRGGCFTENNDVIMYID 122



 Score = 38.9 bits (89), Expect(2) = 5e-07
 Identities = 20/49 (40%), Positives = 29/49 (59%)
 Frame = +1

Query: 196 MLEPSNLMRPDGIYLKMHGYNKKDVFSIQVSCKLLASSLSGKDTRISRN 342
           ML P +L+RPDGIY+     N    +++ +S K+  S LSGKD    +N
Sbjct: 1   MLVPGHLVRPDGIYISK--LNIDTYWTLLISAKMYTSKLSGKDVDDDKN 47