BLASTX nr result

ID: Ophiopogon26_contig00044147 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00044147
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK64853.1| hypothetical protein RhiirC2_755992 [Rhizophagus ...    52   9e-06

>gb|PKK64853.1| hypothetical protein RhiirC2_755992 [Rhizophagus irregularis]
          Length = 136

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 31/44 (70%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = -3

Query: 269 NTSALPSPTPSQ-GSQSYSAQQNVKDNKVXXXXXXXXXXNYGTG 141
           NTSALPSPT SQ GSQSYSAQQNVKDNKV          N GTG
Sbjct: 29  NTSALPSPTLSQQGSQSYSAQQNVKDNKVHSRNSSYSSRNNGTG 72


Top