BLASTX nr result

ID: Ophiopogon26_contig00043457 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00043457
         (1586 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY51795.1| hypothetical protein RhiirA4_407741 [Rhizophagus ...   145   3e-38
gb|EXX79678.1| hypothetical protein RirG_003280 [Rhizophagus irr...   144   4e-38
gb|EXX75401.1| Spt15p [Rhizophagus irregularis DAOM 197198w] >gi...   144   7e-36
gb|EXX75402.1| Spt15p [Rhizophagus irregularis DAOM 197198w]           60   1e-06
dbj|GBC13509.1| TATA box binding transcription initiation factor...    58   7e-06

>gb|PKY51795.1| hypothetical protein RhiirA4_407741 [Rhizophagus irregularis]
          Length = 108

 Score =  145 bits (366), Expect = 3e-38
 Identities = 71/71 (100%), Positives = 71/71 (100%)
 Frame = -1

Query: 215 MNHQAILPNAQYSAPAAFVQVHPVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ 36
           MNHQAILPNAQYSAPAAFVQVHPVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ
Sbjct: 1   MNHQAILPNAQYSAPAAFVQVHPVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ 60

Query: 35  PQSVAGMVPTL 3
           PQSVAGMVPTL
Sbjct: 61  PQSVAGMVPTL 71


>gb|EXX79678.1| hypothetical protein RirG_003280 [Rhizophagus irregularis DAOM
           197198w]
          Length = 72

 Score =  144 bits (362), Expect = 4e-38
 Identities = 70/71 (98%), Positives = 70/71 (98%)
 Frame = -1

Query: 215 MNHQAILPNAQYSAPAAFVQVHPVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ 36
           MNHQAILPN QYSAPAAFVQVHPVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ
Sbjct: 1   MNHQAILPNTQYSAPAAFVQVHPVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ 60

Query: 35  PQSVAGMVPTL 3
           PQSVAGMVPTL
Sbjct: 61  PQSVAGMVPTL 71


>gb|EXX75401.1| Spt15p [Rhizophagus irregularis DAOM 197198w]
 gb|EXX75405.1| Spt15p [Rhizophagus irregularis DAOM 197198w]
 gb|PKC61356.1| TBP-domain-containing protein [Rhizophagus irregularis]
          Length = 244

 Score =  144 bits (362), Expect = 7e-36
 Identities = 70/71 (98%), Positives = 70/71 (98%)
 Frame = -1

Query: 215 MNHQAILPNAQYSAPAAFVQVHPVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ 36
           MNHQAILPN QYSAPAAFVQVHPVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ
Sbjct: 1   MNHQAILPNTQYSAPAAFVQVHPVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ 60

Query: 35  PQSVAGMVPTL 3
           PQSVAGMVPTL
Sbjct: 61  PQSVAGMVPTL 71


>gb|EXX75402.1| Spt15p [Rhizophagus irregularis DAOM 197198w]
          Length = 191

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -1

Query: 89 MMVDEQNSSVADQTNQSQPQSVAGMVPTL 3
          MMVDEQNSSVADQTNQSQPQSVAGMVPTL
Sbjct: 1  MMVDEQNSSVADQTNQSQPQSVAGMVPTL 29


>dbj|GBC13509.1| TATA box binding transcription initiation factor TFIID-1
          [Rhizophagus irregularis DAOM 181602]
 gb|PKC04218.1| TATA-box binding protein [Rhizophagus irregularis]
 gb|PKK79642.1| TATA-box binding protein [Rhizophagus irregularis]
 gb|POG68927.1| TATA-box binding protein [Rhizophagus irregularis DAOM
          181602=DAOM 197198]
          Length = 201

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -1

Query: 86 MVDEQNSSVADQTNQSQPQSVAGMVPTL 3
          MVDEQNSSVADQTNQSQPQSVAGMVPTL
Sbjct: 1  MVDEQNSSVADQTNQSQPQSVAGMVPTL 28


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