BLASTX nr result

ID: Ophiopogon26_contig00043172 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00043172
         (839 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK59828.1| hypothetical protein RhiirC2_762329 [Rhizophagus ...    47   6e-06
gb|PKY59755.1| hypothetical protein RhiirA4_412522 [Rhizophagus ...    47   7e-06
dbj|GBC45087.1| hypothetical protein RIR_2774400 [Rhizophagus ir...    47   7e-06

>gb|PKK59828.1| hypothetical protein RhiirC2_762329 [Rhizophagus irregularis]
          Length = 159

 Score = 47.0 bits (110), Expect(2) = 6e-06
 Identities = 28/51 (54%), Positives = 31/51 (60%), Gaps = 17/51 (33%)
 Frame = +3

Query: 726 LDKKFAEYQTLCNG------VVVGIIKDRA-----------RIEGYRSKNN 827
           LDKK  EYQTLCNG      VVVGIIKDRA           R+EGYR+K +
Sbjct: 108 LDKKSVEYQTLCNGVKKVLSVVVGIIKDRACAEEEPDRKRVRVEGYRTKKS 158



 Score = 32.3 bits (72), Expect(2) = 6e-06
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 680 YLYGTVTTALDWYFLL 727
           YLYG VTTA DW+FLL
Sbjct: 70  YLYGIVTTARDWHFLL 85


>gb|PKY59755.1| hypothetical protein RhiirA4_412522 [Rhizophagus irregularis]
          Length = 336

 Score = 46.6 bits (109), Expect(2) = 7e-06
 Identities = 28/49 (57%), Positives = 30/49 (61%), Gaps = 17/49 (34%)
 Frame = +3

Query: 726 LDKKFAEYQTLCNG------VVVGIIKDRA-----------RIEGYRSK 821
           LDKK  EYQTLCNG      VVVGIIKDRA           R+EGYR+K
Sbjct: 287 LDKKSVEYQTLCNGVKKVLSVVVGIIKDRACAEEEPDRKRVRVEGYRTK 335



 Score = 32.3 bits (72), Expect(2) = 7e-06
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 680 YLYGTVTTALDWYFLL 727
           YLYG VTTA DW+FLL
Sbjct: 249 YLYGIVTTARDWHFLL 264


>dbj|GBC45087.1| hypothetical protein RIR_2774400 [Rhizophagus irregularis DAOM
           181602]
 gb|POG73386.1| hypothetical protein GLOIN_2v1587390 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 333

 Score = 46.6 bits (109), Expect(2) = 7e-06
 Identities = 28/49 (57%), Positives = 30/49 (61%), Gaps = 17/49 (34%)
 Frame = +3

Query: 726 LDKKFAEYQTLCNG------VVVGIIKDRA-----------RIEGYRSK 821
           LDKK  EYQTLCNG      VVVGIIKDRA           R+EGYR+K
Sbjct: 284 LDKKSVEYQTLCNGVKKVLSVVVGIIKDRACAEEEPDRKRVRVEGYRTK 332



 Score = 32.3 bits (72), Expect(2) = 7e-06
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 680 YLYGTVTTALDWYFLL 727
           YLYG VTTA DW+FLL
Sbjct: 246 YLYGIVTTARDWHFLL 261


Top