BLASTX nr result

ID: Ophiopogon26_contig00043042 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00043042
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009413385.1| PREDICTED: transcription repressor OFP7-like...    58   4e-07
ref|XP_010910821.1| PREDICTED: transcription repressor OFP3-like...    58   6e-07

>ref|XP_009413385.1| PREDICTED: transcription repressor OFP7-like [Musa acuminata subsp.
           malaccensis]
          Length = 355

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +3

Query: 264 KERRGREAGELYETGEREGRTCPPASPSSPSKDN 365
           KERR RE G  YETGE EGRTCPPASPSSPSK +
Sbjct: 122 KERRVRETGGYYETGEWEGRTCPPASPSSPSKSS 155


>ref|XP_010910821.1| PREDICTED: transcription repressor OFP3-like [Elaeis guineensis]
          Length = 360

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 32/64 (50%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 195 GGCRPXXXXXXXXXXXXXXXXXN---KERRGREAGELYETGEREGRTCPPASPSSPSKDN 365
           GGCRP                     KERR RE G  YETGE EGR CPPASPSSPSK +
Sbjct: 96  GGCRPTRDIPPLVAKREKRRHGKNKKKERRVRETGGFYETGEGEGRMCPPASPSSPSKSS 155

Query: 366 LCNF 377
            C++
Sbjct: 156 -CHY 158


Top