BLASTX nr result

ID: Ophiopogon26_contig00042934 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00042934
         (486 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC14920.1| cysteine proteinase [Rhizophagus irregularis] >gi...    90   2e-18
gb|EXX50802.1| hypothetical protein RirG_267370 [Rhizophagus irr...    90   3e-18

>gb|PKC14920.1| cysteine proteinase [Rhizophagus irregularis]
 gb|PKC60568.1| cysteine proteinase [Rhizophagus irregularis]
 gb|PKK68781.1| cysteine proteinase [Rhizophagus irregularis]
 gb|PKY20878.1| cysteine proteinase [Rhizophagus irregularis]
 gb|PKY51516.1| cysteine proteinase [Rhizophagus irregularis]
          Length = 352

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 56/112 (50%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
 Frame = +3

Query: 153 SGLAKEENS-IEVKKNNVEPSPQNVSTEAASVSPLPESVETSKPEDXXXXXXXXXXXXXX 329
           SG  KEE     ++  N    PQNVST A       E+   S P +              
Sbjct: 34  SGSEKEETKETPIENTNTITEPQNVSTTA-------ETAPVSSPSNETSDTTEGKTTANA 86

Query: 330 XXXXXXXSQQIWEYEQSIKKEEAGKTPLVCLTEDIQELYQEYEQGSEVYRQK 485
                  SQQ WEYEQSIKKE   KTPLVCLTEDIQ+LYQEYEQGSEVYRQK
Sbjct: 87  AQEAQITSQQNWEYEQSIKKE-VEKTPLVCLTEDIQKLYQEYEQGSEVYRQK 137


>gb|EXX50802.1| hypothetical protein RirG_267370 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC35428.1| ubiquitin thioesterase protein OTUB1 [Rhizophagus irregularis DAOM
           181602]
 gb|POG60328.1| cysteine proteinase [Rhizophagus irregularis DAOM 181602=DAOM
           197198]
          Length = 354

 Score = 90.1 bits (222), Expect = 3e-18
 Identities = 56/112 (50%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
 Frame = +3

Query: 153 SGLAKEENS-IEVKKNNVEPSPQNVSTEAASVSPLPESVETSKPEDXXXXXXXXXXXXXX 329
           SG  KEE     ++  N    PQNVST A       E+   S P +              
Sbjct: 36  SGSEKEETKETPIENTNTITEPQNVSTTA-------ETAPVSSPSNETSDTTEGKTTANA 88

Query: 330 XXXXXXXSQQIWEYEQSIKKEEAGKTPLVCLTEDIQELYQEYEQGSEVYRQK 485
                  SQQ WEYEQSIKKE   KTPLVCLTEDIQ+LYQEYEQGSEVYRQK
Sbjct: 89  AQEAQITSQQNWEYEQSIKKE-VEKTPLVCLTEDIQKLYQEYEQGSEVYRQK 139


Top