BLASTX nr result

ID: Ophiopogon26_contig00042721 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00042721
         (727 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY38657.1| ribosomal protein S5 domain 2-like protein [Rhizo...    70   2e-10
gb|EXX73579.1| Rrp45p [Rhizophagus irregularis DAOM 197198w]           69   5e-10
gb|PKY20584.1| ribosomal protein S5 domain 2-like protein [Rhizo...    69   7e-10
gb|EXX73578.1| Rrp45p [Rhizophagus irregularis DAOM 197198w] >gi...    69   7e-10
gb|PKC60392.1| hypothetical protein RhiirA1_399215, partial [Rhi...    59   2e-07

>gb|PKY38657.1| ribosomal protein S5 domain 2-like protein [Rhizophagus
           irregularis]
          Length = 312

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -3

Query: 572 LVLDYTGNILDIIFITTRAALYNTKIPKTIIQDRGDSE 459
           +VLDY GNILD IF+TTRAALYNTKIPKTIIQDRGD E
Sbjct: 151 IVLDYAGNILDTIFMTTRAALYNTKIPKTIIQDRGDGE 188


>gb|EXX73579.1| Rrp45p [Rhizophagus irregularis DAOM 197198w]
          Length = 271

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -3

Query: 572 LVLDYTGNILDIIFITTRAALYNTKIPKTIIQDRGDSE 459
           +VLDY GNILD IF+ TRAALYNTKIPKTIIQDRGD E
Sbjct: 151 IVLDYAGNILDTIFMATRAALYNTKIPKTIIQDRGDGE 188


>gb|PKY20584.1| ribosomal protein S5 domain 2-like protein [Rhizophagus
           irregularis]
          Length = 312

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -3

Query: 572 LVLDYTGNILDIIFITTRAALYNTKIPKTIIQDRGDSE 459
           +VLDY GNILD IF+ TRAALYNTKIPKTIIQDRGD E
Sbjct: 151 IVLDYAGNILDTIFMATRAALYNTKIPKTIIQDRGDGE 188


>gb|EXX73578.1| Rrp45p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC23522.1| 3' exosome complex component RRP42 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC16800.1| ribosomal protein S5 domain 2-like protein [Rhizophagus
           irregularis]
 gb|PKC60582.1| ribosomal protein S5 domain 2-like protein [Rhizophagus
           irregularis]
 gb|PKK62441.1| ribosomal protein S5 domain 2-like protein [Rhizophagus
           irregularis]
 gb|POG78152.1| ribosomal protein S5 domain 2-type protein [Rhizophagus irregularis
           DAOM 181602=DAOM 197198]
          Length = 312

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -3

Query: 572 LVLDYTGNILDIIFITTRAALYNTKIPKTIIQDRGDSE 459
           +VLDY GNILD IF+ TRAALYNTKIPKTIIQDRGD E
Sbjct: 151 IVLDYAGNILDTIFMATRAALYNTKIPKTIIQDRGDGE 188


>gb|PKC60392.1| hypothetical protein RhiirA1_399215, partial [Rhizophagus
           irregularis]
          Length = 142

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 343 VPTPLDWTSWIETVPAPS*IGLLGLDRADSLLGF 242
           +P  LDWTSWI +VPAPS IGLLG DRADSLLGF
Sbjct: 56  LPASLDWTSWIGSVPAPSWIGLLGFDRADSLLGF 89


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