BLASTX nr result

ID: Ophiopogon26_contig00042643 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00042643
         (594 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC66643.1| hypothetical protein RhiirA1_459455 [Rhizophagus ...   113   1e-28
dbj|GBC38112.1| chromosome partition protein smc [Rhizophagus ir...   109   5e-27
gb|PKY49311.1| hypothetical protein RhiirA4_465245 [Rhizophagus ...    82   3e-15

>gb|PKC66643.1| hypothetical protein RhiirA1_459455 [Rhizophagus irregularis]
 gb|PKY22142.1| hypothetical protein RhiirB3_435975 [Rhizophagus irregularis]
          Length = 142

 Score =  113 bits (283), Expect = 1e-28
 Identities = 72/128 (56%), Positives = 79/128 (61%), Gaps = 17/128 (13%)
 Frame = -3

Query: 550 MLLLRRISQKFVTSSTRSLHTENKSLEWFKDPNNLKLIKAAXXXXXXXXXXXXXVYGAGY 371
           M LLRRI QKF  SSTRSLHTENKSLEWFKDPNNLK IKAA             VYGA Y
Sbjct: 1   MFLLRRILQKFAASSTRSLHTENKSLEWFKDPNNLKQIKAASKVTGLIGVGGLTVYGARY 60

Query: 370 IVRKEVQEGVKPIENKLK----GLETRYVALET---GLET----------QLEARFTGLE 242
           + RKEVQ  +K +E +L+    GLETR+  LET   GLET          +LE RF GLE
Sbjct: 61  MARKEVQNELKALEARLETHFTGLETRFTGLETRFAGLETRFAGLETRFAELETRFAGLE 120

Query: 241 NRLFQFAE 218
            R   FAE
Sbjct: 121 TR---FAE 125


>dbj|GBC38112.1| chromosome partition protein smc [Rhizophagus irregularis DAOM
           181602]
 gb|POG77066.1| hypothetical protein GLOIN_2v1768324 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 156

 Score =  109 bits (273), Expect = 5e-27
 Identities = 68/122 (55%), Positives = 75/122 (61%), Gaps = 17/122 (13%)
 Frame = -3

Query: 550 MLLLRRISQKFVTSSTRSLHTENKSLEWFKDPNNLKLIKAAXXXXXXXXXXXXXVYGAGY 371
           M LLRRI QKF  SSTRSLHTENKSLEWFKDPNNLK IKAA             VY A Y
Sbjct: 1   MFLLRRILQKFAASSTRSLHTENKSLEWFKDPNNLKQIKAASKVTGLIGVGGLTVYCARY 60

Query: 370 IVRKEVQEGVKPIENKLK----GLETRYVALET---GLET----------QLEARFTGLE 242
           + RKEVQ  +K +E +L+    GLETR+  LET   GLET          +LE RF GLE
Sbjct: 61  MARKEVQNELKALEARLETHFTGLETRFTGLETRFAGLETRFAGLETRFAELETRFAGLE 120

Query: 241 NR 236
            R
Sbjct: 121 TR 122


>gb|PKY49311.1| hypothetical protein RhiirA4_465245 [Rhizophagus irregularis]
          Length = 270

 Score = 81.6 bits (200), Expect = 3e-15
 Identities = 51/93 (54%), Positives = 57/93 (61%)
 Frame = -3

Query: 514 TSSTRSLHTENKSLEWFKDPNNLKLIKAAXXXXXXXXXXXXXVYGAGYIVRKEVQEGVKP 335
           TSSTRSLHTE     WFKDPNNLKLIKAA             +YGA Y+VRKEVQ  +K 
Sbjct: 186 TSSTRSLHTE-----WFKDPNNLKLIKAAGEVTGLVGVSGLTMYGAEYMVRKEVQNELKA 240

Query: 334 IENKLKGLETRYVALETGLETQLEARFTGLENR 236
           +E +   LETR+  LET   T LE  FT LE R
Sbjct: 241 LEAR---LETRFTGLETHF-TGLETHFTELETR 269


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