BLASTX nr result

ID: Ophiopogon26_contig00042542 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00042542
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC25315.1| zinc finger ccch domain-containing protein [Rhiz...   156   1e-43
gb|EXX52670.1| Yth1p [Rhizophagus irregularis DAOM 197198w]           156   9e-43

>dbj|GBC25315.1| zinc finger ccch domain-containing protein [Rhizophagus irregularis
           DAOM 181602]
          Length = 396

 Score =  156 bits (395), Expect = 1e-43
 Identities = 82/107 (76%), Positives = 83/107 (77%)
 Frame = +2

Query: 83  MTYMYTRSAIYNVGTRSSXXXXXXXXXXXXRSTMVPRKTSYNLDLRKPTTYDMNTRAATP 262
           MTYMYTRSAIYNVGTRSS            RSTMVPRKTSYNLDLRKPTTYDMNTRAATP
Sbjct: 1   MTYMYTRSAIYNVGTRSSTYNKTATYNTNARSTMVPRKTSYNLDLRKPTTYDMNTRAATP 60

Query: 263 YHAAXXXXXXXXXXXXLYQVASNKSLSKPTETTTYQMSLSNSTVPNQ 403
           Y+AA            LYQVASNKSLSKPTETTTYQMSLSNSTVPNQ
Sbjct: 61  YNAASSTGMGKTTSKTLYQVASNKSLSKPTETTTYQMSLSNSTVPNQ 107


>gb|EXX52670.1| Yth1p [Rhizophagus irregularis DAOM 197198w]
          Length = 512

 Score =  156 bits (395), Expect = 9e-43
 Identities = 82/107 (76%), Positives = 83/107 (77%)
 Frame = +2

Query: 83  MTYMYTRSAIYNVGTRSSXXXXXXXXXXXXRSTMVPRKTSYNLDLRKPTTYDMNTRAATP 262
           MTYMYTRSAIYNVGTRSS            RSTMVPRKTSYNLDLRKPTTYDMNTRAATP
Sbjct: 1   MTYMYTRSAIYNVGTRSSTYNKTATYNTNARSTMVPRKTSYNLDLRKPTTYDMNTRAATP 60

Query: 263 YHAAXXXXXXXXXXXXLYQVASNKSLSKPTETTTYQMSLSNSTVPNQ 403
           Y+AA            LYQVASNKSLSKPTETTTYQMSLSNSTVPNQ
Sbjct: 61  YNAASSTGMGKTTSKTLYQVASNKSLSKPTETTTYQMSLSNSTVPNQ 107


Top