BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00041662
         (755 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PSK76455.1| DNA-directed RNA polymerase II subunit RPB1 [[Can...    89   3e-16
gb|PSK47576.1| DNA-directed RNA polymerase II subunit RPB1 [[Can...    88   6e-16
gb|PIS56106.1| DNA-directed RNA polymerase II subunit RPB1 [[Can...    86   4e-15
gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...    66   1e-08
gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...    66   1e-08
gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...    66   1e-08
gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...    66   1e-08
dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhi...    66   1e-08
ref|XP_009047732.1| hypothetical protein LOTGIDRAFT_139515, part...    59   2e-07
gb|KPI94870.1| DNA-directed RNA polymerase II subunit RPB1 [Papi...    62   4e-07
gb|KMR03013.1| dna-directed rna polymerase ii subunit rpb1 [Lasi...    61   8e-07
gb|PSK38613.1| hypothetical protein C7M61_002548 [[Candida] pseu...    59   5e-06

>gb|PSK76455.1| DNA-directed RNA polymerase II subunit RPB1 [[Candida] auris]
          Length = 1714

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 48/110 (43%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
 Frame = +3

Query: 237  SIIFS*FTKLFTNVSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFSNIA*LYTDVXXXX 416
            SI+ + F KLFTN++KL++NIT L +N+ K+F  +T LFT+FAKL +N A ++T+     
Sbjct: 1544 SIVLTNFAKLFTNLAKLFANITILLTNIAKLFANITILFTNFAKLLTNFAIIFTNFSKLL 1603

Query: 417  XXXXXXXA-LFTDVTNLLTDFSKLFANFSSLFTHFSIVFSNIACLHTLIT 563
                   A LFT+ T LL +F+KL  NF+ LFT+F+ + S I  + T  T
Sbjct: 1604 AYLLPNFAKLFTNFTKLLPNFTKLLPNFTKLFTYFAKLLSYITIILTYFT 1653



 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 40/115 (34%), Positives = 69/115 (60%)
 Frame = +3

Query: 219  YLFTDKSIIFS*FTKLFTNVSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFSNIA*LYT 398
            YL  + + +F+ FTKL  N +KL  N TKL++   K+ +Y+T + T+F  +F+N+A + T
Sbjct: 1605 YLLPNFAKLFTNFTKLLPNFTKLLPNFTKLFTYFAKLLSYITIILTYFTTVFANVAAILT 1664

Query: 399  DVXXXXXXXXXXXALFTDVTNLLTDFSKLFANFSSLFTHFSIVFSNIACLHTLIT 563
             V            +  +V ++L + S +FAN S++F +FS VF+N+A + T +T
Sbjct: 1665 YV----------ATILANVASILANVSAVFANVSTVFANFSAVFANVASILTYLT 1709



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 33/97 (34%), Positives = 57/97 (58%)
 Frame = +3

Query: 276  VSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFSNIA*LYTDVXXXXXXXXXXXALFTDV 455
            VS ++   T + + V+K+ +Y++ + T+FAKLF+N+A                  LF ++
Sbjct: 1522 VSWIWGYFTNVLAYVSKLLSYVSIVLTNFAKLFTNLA-----------------KLFANI 1564

Query: 456  TNLLTDFSKLFANFSSLFTHFSIVFSNIACLHTLITK 566
            T LLT+ +KLFAN + LFT+F+ + +N A + T  +K
Sbjct: 1565 TILLTNIAKLFANITILFTNFAKLLTNFAIIFTNFSK 1601


>gb|PSK47576.1| DNA-directed RNA polymerase II subunit RPB1 [[Candida] auris]
          Length = 1688

 Score = 87.8 bits (216), Expect = 6e-16
 Identities = 49/129 (37%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
 Frame = +3

Query: 198  TAASNKPYLFTDKSIIFS*FTKLFTNVSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFS 377
            T+   +P LFT+ + +F+  T L TN++KL++NIT L +N+ K+F  +T LFT+FAKL +
Sbjct: 1512 TSYGGQPSLFTNLAKLFANITILLTNIAKLFANITILLTNIAKLFANITILFTNFAKLLT 1571

Query: 378  NIA*LYTDVXXXXXXXXXXXA-LFTDVTNLLTDFSKLFANFSSL-------FTHFSIVFS 533
            N A ++T+            A LFT+ T LL +F+KLF  F+ L        T+F+ +F+
Sbjct: 1572 NFAIIFTNFSKLLAYLLPNFAKLFTNFTKLLPNFTKLFTYFAKLLSYITIILTYFTTIFA 1631

Query: 534  NIACLHTLI 560
            N+A + T +
Sbjct: 1632 NVAAILTYV 1640



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 8/142 (5%)
 Frame = +3

Query: 162  FNNDDVCYTIL*TAASNKPYLFTDKSIIFS*FTKLFTNVSKLYS----NITKLYSNVTKV 329
            F N  +  T +    +N   LFT+ + + + F  +FTN SKL +    N  KL++N TK+
Sbjct: 1542 FANITILLTNIAKLFANITILFTNFAKLLTNFAIIFTNFSKLLAYLLPNFAKLFTNFTKL 1601

Query: 330  FTYLTKLFTHFAKLFSNIA*L---YTDVXXXXXXXXXXXA-LFTDVTNLLTDFSKLFANF 497
                TKLFT+FAKL S I  +   +T +           A +  +V ++L + S +FAN 
Sbjct: 1602 LPNFTKLFTYFAKLLSYITIILTYFTTIFANVAAILTYVATILANVASVLANVSAVFANV 1661

Query: 498  SSLFTHFSIVFSNIACLHTLIT 563
            S++F +FS VF+N+A + T +T
Sbjct: 1662 STVFANFSAVFANVASILTYLT 1683


>gb|PIS56106.1| DNA-directed RNA polymerase II subunit RPB1 [[Candida] auris]
          Length = 1707

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 8/116 (6%)
 Frame = +3

Query: 237  SIIFS*FTKLFTNVSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFSNIA*LYTDVXXXX 416
            SI+ + F KLFTN++KL++NIT L +N+ K+F  +T LFT+FAKL +N A ++T+     
Sbjct: 1544 SIVLTNFAKLFTNLAKLFANITILLTNIAKLFANITILFTNFAKLLTNFAIIFTNFSKLL 1603

Query: 417  XXXXXXXA-LFTDVTNLLTDFSKLFANFSSL-------FTHFSIVFSNIACLHTLI 560
                   A LFT+ T LL +F+KLF  F+ L        T+F+ +F+N+A + T +
Sbjct: 1604 AYLLPNFAKLFTNFTKLLPNFTKLFTYFAKLLSYITIILTYFTTIFANVAAILTYV 1659



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 8/142 (5%)
 Frame = +3

Query: 162  FNNDDVCYTIL*TAASNKPYLFTDKSIIFS*FTKLFTNVSKLYS----NITKLYSNVTKV 329
            F N  +  T +    +N   LFT+ + + + F  +FTN SKL +    N  KL++N TK+
Sbjct: 1561 FANITILLTNIAKLFANITILFTNFAKLLTNFAIIFTNFSKLLAYLLPNFAKLFTNFTKL 1620

Query: 330  FTYLTKLFTHFAKLFSNIA*L---YTDVXXXXXXXXXXXA-LFTDVTNLLTDFSKLFANF 497
                TKLFT+FAKL S I  +   +T +           A +  +V ++L + S +FAN 
Sbjct: 1621 LPNFTKLFTYFAKLLSYITIILTYFTTIFANVAAILTYVATILANVASVLANVSAVFANV 1680

Query: 498  SSLFTHFSIVFSNIACLHTLIT 563
            S++F +FS VF+N+A + T +T
Sbjct: 1681 STVFANFSAVFANVASILTYLT 1702



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 33/97 (34%), Positives = 57/97 (58%)
 Frame = +3

Query: 276  VSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFSNIA*LYTDVXXXXXXXXXXXALFTDV 455
            VS ++   T + + V+K+ +Y++ + T+FAKLF+N+A                  LF ++
Sbjct: 1522 VSWIWGYFTNVLAYVSKLLSYVSIVLTNFAKLFTNLA-----------------KLFANI 1564

Query: 456  TNLLTDFSKLFANFSSLFTHFSIVFSNIACLHTLITK 566
            T LLT+ +KLFAN + LFT+F+ + +N A + T  +K
Sbjct: 1565 TILLTNIAKLFANITILFTNFAKLLTNFAIIFTNFSK 1601


>gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1860

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 1    PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 87
            PSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1621 PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 1649


>gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1861

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 1    PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 87
            PSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1621 PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 1649


>gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1861

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 1    PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 87
            PSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1621 PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 1649


>gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1861

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 1    PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 87
            PSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1621 PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 1649


>dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
            DAOM 181602]
 gb|PKC73289.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
 gb|POG69694.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
            DAOM 181602=DAOM 197198]
          Length = 1861

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +1

Query: 1    PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 87
            PSYGPTSPQYSPSSPAPTAFAHSPGGSSF
Sbjct: 1621 PSYGPTSPQYSPSSPAPTAFAHSPGGSSF 1649


>ref|XP_009047732.1| hypothetical protein LOTGIDRAFT_139515, partial [Lottia gigantea]
 gb|ESP01561.1| hypothetical protein LOTGIDRAFT_139515, partial [Lottia gigantea]
          Length = 125

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 28/113 (24%), Positives = 63/113 (55%)
 Frame = +3

Query: 258 TKLFTNVSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFSNIA*LYTDVXXXXXXXXXXX 437
           TK + +++K YS +TK YS++TK ++ +TK ++   K +S+I   Y+D+           
Sbjct: 4   TKYYLDITKYYSVVTKYYSDITKYYSDITKYYSDITKYYSDITKYYSDI---TKYYSDIT 60

Query: 438 ALFTDVTNLLTDFSKLFANFSSLFTHFSIVFSNIACLHTLITKCSRELCTRIF 596
             ++D+T   +D +K +++ +  ++  +  +S+I   ++ ITK   ++  R +
Sbjct: 61  KYYSDITKYYSDITKYYSDITKYYSDITKYYSDITKYYSDITKYYSDILFRYY 113



 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 31/116 (26%), Positives = 66/116 (56%)
 Frame = +3

Query: 183 YTIL*TAASNKPYLFTDKSIIFS*FTKLFTNVSKLYSNITKLYSNVTKVFTYLTKLFTHF 362
           Y+++    S+    ++D +  +S  TK +++++K YS+ITK YS++TK ++ +TK ++  
Sbjct: 14  YSVVTKYYSDITKYYSDITKYYSDITKYYSDITKYYSDITKYYSDITKYYSDITKYYSDI 73

Query: 363 AKLFSNIA*LYTDVXXXXXXXXXXXALFTDVTNLLTDFSKLFANFSSLFTHFSIVF 530
            K +S+I   Y+D+             ++D+T   +D +K +++   LF ++ I F
Sbjct: 74  TKYYSDITKYYSDI----------TKYYSDITKYYSDITKYYSDI--LFRYYQISF 117



 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 27/105 (25%), Positives = 61/105 (58%)
 Frame = +3

Query: 225 FTDKSIIFS*FTKLFTNVSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFSNIA*LYTDV 404
           + D +  +S  TK +++++K YS+ITK YS++TK ++ +TK ++   K +S+I   Y+D+
Sbjct: 7   YLDITKYYSVVTKYYSDITKYYSDITKYYSDITKYYSDITKYYSDITKYYSDITKYYSDI 66

Query: 405 XXXXXXXXXXXALFTDVTNLLTDFSKLFANFSSLFTHFSIVFSNI 539
                        ++D+T   +D +K +++ +  ++  +  +S+I
Sbjct: 67  ----------TKYYSDITKYYSDITKYYSDITKYYSDITKYYSDI 101


>gb|KPI94870.1| DNA-directed RNA polymerase II subunit RPB1 [Papilio xuthus]
          Length = 1776

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 16/125 (12%)
 Frame = +3

Query: 222  LFTDKSIIFS*FTKLFTNVSKLYSNITKLYSNVTK--------------VFTYLTKLFTH 359
            LF+D + +FS F KLF N+++L ++I  ++++VT+              +FTY ++L +H
Sbjct: 1595 LFSDVANLFSNFPKLFANIARLLADIAFVFADVTQLFPYFAELFSHQSGIFTYFSQLLSH 1654

Query: 360  FAKLFSNIA*LYTDVXXXXXXXXXXXALFTDVTNLLTDFSKLFANFSS--LFTHFSIVFS 533
            FA+L +N + + T+             +F DV+ +    SKLFA  SS  LFT FS VF+
Sbjct: 1655 FAELLANESLVLTNKPVLLTDEPW---VFADVSRIFAILSKLFAYQSSLYLFTIFSKVFT 1711

Query: 534  NIACL 548
             +A +
Sbjct: 1712 IVATI 1716


>gb|KMR03013.1| dna-directed rna polymerase ii subunit rpb1 [Lasius niger]
          Length = 1538

 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
 Frame = +3

Query: 222  LFTDKSIIFS*FTKLFTNVSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFSNIA*LYTD 401
            L  D+S +F+   KL  + SKL ++ TKL+++  ++F ++ +L T+  KLF++IA L  D
Sbjct: 1431 LLADESELFTDIAKLLADESKLLAHFTKLFADEPELFAHIAELLTNEPKLFTHIAELLAD 1490

Query: 402  VXXXXXXXXXXXA----LFTDVTNLLTDFSKLFANFSSLFTHFSIVFS 533
            +           A    L TD + LLT  SKLF + S LF  F+ +F+
Sbjct: 1491 LAKLLAHEPELLAYESKLLTDESKLLTYKSKLFTHKSELFADFTELFA 1538


>gb|PSK38613.1| hypothetical protein C7M61_002548 [[Candida] pseudohaemulonii]
          Length = 1648

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 35/99 (35%), Positives = 53/99 (53%)
 Frame = +3

Query: 237  SIIFS*FTKLFTNVSKLYSNITKLYSNVTKVFTYLTKLFTHFAKLFSNIA*LYTDVXXXX 416
            SI+ + F  + TN+S L++N  KL +N  K+ T    L T+FAKL +N   L T+     
Sbjct: 1491 SILLANFAIILTNISILFTNFAKLLANFAKLLTNFAILLTNFAKLLTNFTKLLTNFAF-- 1548

Query: 417  XXXXXXXALFTDVTNLLTDFSKLFANFSSLFTHFSIVFS 533
                    + T V  LLT+ S + ANF+ L  +F+IV +
Sbjct: 1549 --------VLTYVAKLLTNISIILANFAKLLANFAIVLA 1579