BLASTX nr result

ID: Ophiopogon26_contig00040777 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00040777
         (607 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC15792.1| hypothetical protein RIR_0409000 [Rhizophagus ir...    49   2e-06

>dbj|GBC15792.1| hypothetical protein RIR_0409000 [Rhizophagus irregularis DAOM
           181602]
          Length = 107

 Score = 49.3 bits (116), Expect(2) = 2e-06
 Identities = 27/44 (61%), Positives = 28/44 (63%), Gaps = 12/44 (27%)
 Frame = +2

Query: 134 HYCAGT------------IVTSSISSLGEKSFLDACNLVPISQL 229
           HYC GT            + TSSISSLGEKS  DACNLVPISQL
Sbjct: 64  HYCTGTTTTESSITTTNIVTTSSISSLGEKSCPDACNLVPISQL 107



 Score = 30.4 bits (67), Expect(2) = 2e-06
 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +3

Query: 36  VITDLFLFNSFKKTSVFLSCN-DSAFAIVVLFQF 134
           V+ D+   + F K SV LS N DSAFA+VVLF +
Sbjct: 32  VLYDVSTASFFLKASVSLSSNNDSAFAMVVLFHY 65


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