BLASTX nr result

ID: Ophiopogon26_contig00040160 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00040160
         (650 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC11078.1| hypothetical protein: PROVISIONAL [Rhizophagus i...    75   5e-12
dbj|GBC33017.1| hypothetical protein: PROVISIONAL [Rhizophagus i...    62   6e-08
dbj|GBC11087.1| hypothetical protein RIR_0019900 [Rhizophagus ir...    57   1e-06

>dbj|GBC11078.1| hypothetical protein: PROVISIONAL [Rhizophagus irregularis DAOM
           181602]
          Length = 429

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 52/117 (44%), Positives = 63/117 (53%), Gaps = 33/117 (28%)
 Frame = +3

Query: 384 GRLDDGNRNERFRYSKDPKR*NGSVLQYSESVKYGTPDEITTG*KT---KRNS------- 533
           G LDDG    RFRYSKD KR NGSVLQYS+S+KYGTPDE++ G  +    RNS       
Sbjct: 290 GCLDDGIETNRFRYSKDLKRQNGSVLQYSKSIKYGTPDEMSLGPCSNIPNRNSGRNYEPD 349

Query: 534 --FVGGSLD------------------VRNSTFRRFCGSLDRPEFNISKV---LLLW 635
             +V G+ +                  V N    RF GSLD+PEFNI K+   L +W
Sbjct: 350 FVYVKGTPERIHKPGFGWKGKKKTKEKVENEN-ERFSGSLDKPEFNILKIQQSLYIW 405


>dbj|GBC33017.1| hypothetical protein: PROVISIONAL [Rhizophagus irregularis DAOM
           181602]
          Length = 217

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 44/100 (44%), Positives = 50/100 (50%), Gaps = 26/100 (26%)
 Frame = +3

Query: 414 RFRYSKDPKR*NGSVLQYSESVKYGTPDE---ITTG*KTKRNSFVGGSLDVRNST----- 569
           RFRY KD KR NGSVLQYS+S+KY TPDE    T    T R  FV  +    + T     
Sbjct: 69  RFRYFKDLKRQNGSVLQYSKSIKYETPDERSLETLDEITNRTLFVERNAGTNSRTGLWVE 128

Query: 570 ---------------FRRFCGSLDRPEFNISKV---LLLW 635
                            RF GSLD+PEFNI KV   L +W
Sbjct: 129 GNKGKEKTKEKVENENERFSGSLDKPEFNILKVQRSLYIW 168


>dbj|GBC11087.1| hypothetical protein RIR_0019900 [Rhizophagus irregularis DAOM
           181602]
          Length = 182

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/76 (50%), Positives = 44/76 (57%), Gaps = 13/76 (17%)
 Frame = +3

Query: 387 RLDDG---NR----------NERFRYSKDPKR*NGSVLQYSESVKYGTPDEITTG*KTKR 527
           RLDDG   NR          + RF YSKDPKR NGSVLQYS+S+KYGTPDE     +  +
Sbjct: 12  RLDDGIETNRYTLDSFRSWISVRFWYSKDPKRRNGSVLQYSKSIKYGTPDE-----RNCQ 66

Query: 528 NSFVGGSLDVRNSTFR 575
            +F    L VR   FR
Sbjct: 67  MNFYEPDLKVRAPIFR 82



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
 Frame = +2

Query: 308 RFRCSRIPKRQNVPVLQDSEAAKCSRTFG*WKSKRTVSVLQGSETVKWFRAPIF*IGKIW 487
           RF  S+ PKR+N  VLQ S++ K          +R   +      +K  RAPIF IGK+W
Sbjct: 34  RFWYSKDPKRRNGSVLQYSKSIKYGTP-----DERNCQMNFYEPDLK-VRAPIFRIGKMW 87

Query: 488 NAGRNYNR----MKNEKEXXXXXXXXXTEFNISKVLRLLRQTGIQYFEGSA 628
           N+GRNY      +K   E               KV RL+ QTGIQYFEGSA
Sbjct: 88  NSGRNYEPDFVCVKGTPERIHEPGFGW------KVQRLIGQTGIQYFEGSA 132


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