BLASTX nr result

ID: Ophiopogon26_contig00039941 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00039941
         (479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX51262.1| Tfg2p [Rhizophagus irregularis DAOM 197198w]           191   3e-57
dbj|GBC42612.1| Transcription initiation factor TFIIF subunit be...   191   4e-57
gb|PKC06688.1| hypothetical protein RhiirA5_482124 [Rhizophagus ...   191   4e-57
gb|PKY53302.1| hypothetical protein RhiirA4_425914 [Rhizophagus ...   189   2e-56
dbj|GBC42613.1| transcription initiation factor tfiif subunit be...   178   5e-55
gb|EXX51260.1| Tfg2p [Rhizophagus irregularis DAOM 197198w] >gi|...   178   9e-55
gb|EXX66945.1| Tfg2p [Rhizophagus irregularis DAOM 197198w] >gi|...   172   2e-50
gb|PKY56123.1| hypothetical protein RhiirA4_506499 [Rhizophagus ...   165   6e-48
gb|PKK61923.1| hypothetical protein RhiirC2_631458, partial [Rhi...   126   7e-33
gb|PKB98987.1| hypothetical protein RhiirA5_250110, partial [Rhi...   126   7e-33
gb|ORX91171.1| hypothetical protein K493DRAFT_317464 [Basidiobol...   103   9e-24
gb|OMJ29609.1| Transcription initiation factor IIF subunit beta ...    99   1e-22
gb|OMJ21366.1| Transcription initiation factor IIF subunit beta ...   100   5e-22
ref|XP_013025608.1| transcription factor TFIIF complex beta subu...    98   2e-21
ref|XP_013016482.1| transcription factor TFIIF complex beta subu...    98   2e-21
gb|OLY78382.1| Transcription initiation factor IIF subunit beta ...    98   3e-21
gb|OZJ01846.1| hypothetical protein BZG36_04941 [Bifiguratus ade...   100   3e-21
gb|OMH81933.1| Transcription initiation factor IIF subunit beta ...    99   3e-21
ref|NP_595082.1| transcription factor TFIIF complex beta subunit...    95   2e-20
emb|CDS10000.1| hypothetical protein LRAMOSA02677 [Lichtheimia r...    95   2e-20

>gb|EXX51262.1| Tfg2p [Rhizophagus irregularis DAOM 197198w]
          Length = 330

 Score =  191 bits (484), Expect = 3e-57
 Identities = 97/119 (81%), Positives = 101/119 (84%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS
Sbjct: 214 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 273

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIEGSKSDDENMLFGD 121
           QQSS ASESIAPLGLEAPAAG  +  E   DDD+EFE   N+D+IE     DE  LFGD
Sbjct: 274 QQSSNASESIAPLGLEAPAAGTSNEVE---DDDFEFE---NDDDIEHKLESDEENLFGD 326


>dbj|GBC42612.1| Transcription initiation factor TFIIF subunit beta [Rhizophagus
           irregularis DAOM 181602]
          Length = 338

 Score =  191 bits (484), Expect = 4e-57
 Identities = 97/119 (81%), Positives = 101/119 (84%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS
Sbjct: 222 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 281

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIEGSKSDDENMLFGD 121
           QQSS ASESIAPLGLEAPAAG  +  E   DDD+EFE   N+D+IE     DE  LFGD
Sbjct: 282 QQSSNASESIAPLGLEAPAAGTSNEVE---DDDFEFE---NDDDIEHKLESDEENLFGD 334


>gb|PKC06688.1| hypothetical protein RhiirA5_482124 [Rhizophagus irregularis]
 gb|PKC69175.1| hypothetical protein RhiirA1_392310 [Rhizophagus irregularis]
 gb|PKK80611.1| hypothetical protein RhiirC2_704094 [Rhizophagus irregularis]
 gb|PKY27971.1| hypothetical protein RhiirB3_390698 [Rhizophagus irregularis]
 gb|POG62692.1| hypothetical protein GLOIN_2v1485249 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 340

 Score =  191 bits (484), Expect = 4e-57
 Identities = 97/119 (81%), Positives = 101/119 (84%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS
Sbjct: 224 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 283

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIEGSKSDDENMLFGD 121
           QQSS ASESIAPLGLEAPAAG  +  E   DDD+EFE   N+D+IE     DE  LFGD
Sbjct: 284 QQSSNASESIAPLGLEAPAAGTSNEVE---DDDFEFE---NDDDIEHKLESDEENLFGD 336


>gb|PKY53302.1| hypothetical protein RhiirA4_425914 [Rhizophagus irregularis]
          Length = 340

 Score =  189 bits (480), Expect = 2e-56
 Identities = 96/119 (80%), Positives = 101/119 (84%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NELIDLLFGAFEK+TYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS
Sbjct: 224 NELIDLLFGAFEKFTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 283

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIEGSKSDDENMLFGD 121
           QQSS ASESIAPLGLEAPAAG  +  E   DDD+EFE   N+D+IE     DE  LFGD
Sbjct: 284 QQSSNASESIAPLGLEAPAAGTSNEVE---DDDFEFE---NDDDIEHKLESDEENLFGD 336


>dbj|GBC42613.1| transcription initiation factor tfiif subunit beta [Rhizophagus
           irregularis DAOM 181602]
          Length = 117

 Score =  178 bits (451), Expect = 5e-55
 Identities = 92/120 (76%), Positives = 96/120 (80%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAIL+KRGPYNNCYHLKPEYS
Sbjct: 4   NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILNKRGPYNNCYHLKPEYS 63

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIEGSKSDDENMLFGDD 118
           QQSS ASES APLG EAPAA      E   DDD+EFE   N D+IE     D+  LF DD
Sbjct: 64  QQSSNASESTAPLGSEAPAAETSKEVE---DDDFEFE---NNDDIEYKLESDDKNLFKDD 117


>gb|EXX51260.1| Tfg2p [Rhizophagus irregularis DAOM 197198w]
 gb|PKC06689.1| hypothetical protein RhiirA5_400243 [Rhizophagus irregularis]
 gb|PKC69176.1| hypothetical protein RhiirA1_505092 [Rhizophagus irregularis]
 gb|PKK80610.1| hypothetical protein RhiirC2_704093 [Rhizophagus irregularis]
 gb|PKY27972.1| hypothetical protein RhiirB3_479840 [Rhizophagus irregularis]
 gb|POG62691.1| hypothetical protein GLOIN_2v1485248 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 135

 Score =  178 bits (451), Expect = 9e-55
 Identities = 92/120 (76%), Positives = 96/120 (80%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAIL+KRGPYNNCYHLKPEYS
Sbjct: 22  NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILNKRGPYNNCYHLKPEYS 81

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIEGSKSDDENMLFGDD 118
           QQSS ASES APLG EAPAA      E   DDD+EFE   N D+IE     D+  LF DD
Sbjct: 82  QQSSNASESTAPLGSEAPAAETSKEVE---DDDFEFE---NNDDIEYKLESDDKNLFKDD 135


>gb|EXX66945.1| Tfg2p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC38009.1| Transcription initiation factor TFIIF subunit beta [Rhizophagus
           irregularis DAOM 181602]
          Length = 302

 Score =  172 bits (437), Expect = 2e-50
 Identities = 95/121 (78%), Positives = 100/121 (82%), Gaps = 1/121 (0%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRG YNNCYHLKPEYS
Sbjct: 194 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGSYNNCYHLKPEYS 253

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFE-IGDNEDEIEGSKSDDENMLFGD 121
           +QSS AS+ IAPLGLEAPA G         DDD+EFE   DNE ++E   SDDEN LFGD
Sbjct: 254 KQSSNASD-IAPLGLEAPAIGT-------VDDDFEFENDDDNEYKLE---SDDEN-LFGD 301

Query: 120 D 118
           D
Sbjct: 302 D 302


>gb|PKY56123.1| hypothetical protein RhiirA4_506499 [Rhizophagus irregularis]
          Length = 272

 Score =  165 bits (418), Expect = 6e-48
 Identities = 88/120 (73%), Positives = 95/120 (79%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRG YNN YHLKPEYS
Sbjct: 164 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGSYNNYYHLKPEYS 223

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIEGSKSDDENMLFGDD 118
           +QSS AS+ IAPLGLEAPA G         DDD+EFE   N+++IE     D+  LF DD
Sbjct: 224 KQSSNASD-IAPLGLEAPAIGT-------VDDDFEFE---NDNDIEYKLESDDENLFEDD 272


>gb|PKK61923.1| hypothetical protein RhiirC2_631458, partial [Rhizophagus
           irregularis]
 gb|POG69098.1| transcription initiation factor IIF, beta subunit, partial
           [Rhizophagus irregularis DAOM 181602=DAOM 197198]
          Length = 251

 Score =  126 bits (316), Expect = 7e-33
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEY 301
           NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRG YNNCYHLKPEY
Sbjct: 193 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGSYNNCYHLKPEY 251


>gb|PKB98987.1| hypothetical protein RhiirA5_250110, partial [Rhizophagus
           irregularis]
 gb|PKC62730.1| hypothetical protein RhiirA1_308561, partial [Rhizophagus
           irregularis]
 gb|PKY28728.1| hypothetical protein RhiirB3_312664, partial [Rhizophagus
           irregularis]
          Length = 251

 Score =  126 bits (316), Expect = 7e-33
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEY 301
           NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRG YNNCYHLKPEY
Sbjct: 193 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGSYNNCYHLKPEY 251


>gb|ORX91171.1| hypothetical protein K493DRAFT_317464 [Basidiobolus meristosporus
           CBS 931.73]
          Length = 310

 Score =  103 bits (258), Expect = 9e-24
 Identities = 52/106 (49%), Positives = 70/106 (66%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NEL+DLLF  FEKY YWTL+G+ +Y KQP SYLK+VLNEI IL+K+GPY + Y LKPE+ 
Sbjct: 211 NELMDLLFEGFEKYPYWTLKGIIEYTKQPVSYLKEVLNEICILNKKGPYTSMYQLKPEFK 270

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIE 160
           +              EA  +G G G+E   D+  E E+ D++D++E
Sbjct: 271 KAGKEKK--------EADQSGDGKGDEPNIDE--ELEMDDDDDDLE 306


>gb|OMJ29609.1| Transcription initiation factor IIF subunit beta [Smittium culicis]
          Length = 197

 Score = 98.6 bits (244), Expect = 1e-22
 Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 7/104 (6%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEY- 301
           NELIDLLFGAF K+ YWTL+GL +Y KQP ++LK+VLN+IA+L+KRGPY++ Y LKPE+ 
Sbjct: 91  NELIDLLFGAFGKFAYWTLKGLIEYTKQPSAFLKEVLNDIAVLNKRGPYSSMYSLKPEFR 150

Query: 300 --SQQSSTASESIAPLGLEAPAA----GVGSGNEGGDDDDYEFE 187
             +  + T++ S  P G    A          NE  +++D +FE
Sbjct: 151 GDTPANETSAGSGEPSGSNDQATYSEDQFNKPNENAEEEDDDFE 194


>gb|OMJ21366.1| Transcription initiation factor IIF subunit beta [Smittium culicis]
          Length = 331

 Score = 99.8 bits (247), Expect = 5e-22
 Identities = 51/104 (49%), Positives = 71/104 (68%), Gaps = 7/104 (6%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEY- 301
           NELIDLLFGAF K+ YWTL+GL +Y KQP ++LK+VLN+IA+L+KRGPY++ Y LKPE+ 
Sbjct: 225 NELIDLLFGAFGKFAYWTLKGLIEYTKQPSAFLKEVLNDIAVLNKRGPYSSMYSLKPEFR 284

Query: 300 --SQQSSTASESIAPLGLEAPAA----GVGSGNEGGDDDDYEFE 187
             +  + T++ S  P G    AA         NE  +++D +FE
Sbjct: 285 GDTPGTETSAGSGEPSGSNDQAAYSEDQFNKPNENAEEEDDDFE 328


>ref|XP_013025608.1| transcription factor TFIIF complex beta subunit Tfg2
           [Schizosaccharomyces cryophilus OY26]
 gb|EPY49579.1| transcription factor TFIIF complex beta subunit Tfg2
           [Schizosaccharomyces cryophilus OY26]
          Length = 313

 Score = 97.8 bits (242), Expect = 2e-21
 Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 12/118 (10%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEY- 301
           NEL+D+LF  FE Y YWTL+GL++Y KQPE YLK+VL+ IAIL+KRGPY   Y LKPEY 
Sbjct: 195 NELLDILFKCFEDYEYWTLKGLREYVKQPEVYLKEVLDSIAILNKRGPYALKYSLKPEYK 254

Query: 300 -----------SQQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIE 160
                      +QQ S +     P   +  A+ +G  +   D +    + GDN+DE+E
Sbjct: 255 GTMDAATRELLNQQVSQSDSFQQPNADKGSASPIGPSSSASDAN----KDGDNDDEVE 308


>ref|XP_013016482.1| transcription factor TFIIF complex beta subunit Tfg2
           [Schizosaccharomyces octosporus yFS286]
 gb|EPX75059.1| transcription factor TFIIF complex beta subunit Tfg2
           [Schizosaccharomyces octosporus yFS286]
          Length = 313

 Score = 97.8 bits (242), Expect = 2e-21
 Identities = 53/121 (43%), Positives = 68/121 (56%), Gaps = 15/121 (12%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NEL+D+LF  FE Y YWTL+GL++Y KQPE YLK+VL+ IAIL+KRGPY   Y LKPEY 
Sbjct: 195 NELLDILFKCFEDYEYWTLKGLREYVKQPEVYLKEVLDSIAILNKRGPYALKYSLKPEYK 254

Query: 297 ---------------QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEI 163
                           QS  + +  A  G  +P     S ++   D       GDN+DE+
Sbjct: 255 GTMDAATRELLNQQVSQSELSQQQNAQKGSASPTGPSSSASDANKD-------GDNDDEV 307

Query: 162 E 160
           E
Sbjct: 308 E 308


>gb|OLY78382.1| Transcription initiation factor IIF subunit beta [Smittium
           mucronatum]
          Length = 335

 Score = 97.8 bits (242), Expect = 3e-21
 Identities = 52/113 (46%), Positives = 72/113 (63%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NELIDLLFGAF K+ YWTL+GL +Y KQP ++LK+VL++IA+L+KRGPY++ Y LKPE+ 
Sbjct: 225 NELIDLLFGAFGKFAYWTLKGLIEYTKQPSAFLKEVLSDIAVLNKRGPYSSMYSLKPEFR 284

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYEFEIGDNEDEIEGSKSDDE 139
             SS   E+ A  G     A  G+ +     D Y  +  +N +E +    D E
Sbjct: 285 GDSS-IPENSADQGTSNSDANGGNDSPKNPGDQYN-QAPENAEEEDDDFEDVE 335


>gb|OZJ01846.1| hypothetical protein BZG36_04941 [Bifiguratus adelaidae]
          Length = 890

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 7/110 (6%)
 Frame = -3

Query: 477  NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEY- 301
            NEL+D+LF AFEKY YWT +G+ ++ KQP SYLKDVL EIAIL+KRGPY + Y LKPE+ 
Sbjct: 775  NELMDILFEAFEKYPYWTFKGIVEHTKQPASYLKDVLAEIAILNKRGPYTSMYQLKPEFR 834

Query: 300  ---SQQSSTASESI-APLGLEAPAAGVGSGNEGG--DDDDYEFEIGDNED 169
                +      ES+ + LG++       SG EG   +++D + E  D+ED
Sbjct: 835  GRAPETKKEEEESVKSRLGVKREPIEGASGTEGDGMEEEDEDMEDDDDED 884


>gb|OMH81933.1| Transcription initiation factor IIF subunit beta [Zancudomyces
           culisetae]
          Length = 476

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 22/140 (15%)
 Frame = -3

Query: 474 ELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEY-- 301
           +L+DLLF AFEKY YW+ +GL ++ KQP +YLK+VL +IAIL+KRGPYN+ Y LKPEY  
Sbjct: 334 KLVDLLFSAFEKYAYWSFKGLLEFTKQPSTYLKEVLGDIAILNKRGPYNSMYSLKPEYMS 393

Query: 300 ---------SQQSSTAS-----ESIAPLGLEAPAAGVGS------GNEGGDDDDYEFEIG 181
                       +STAS      S    G  A A G         GN GG   D  F  G
Sbjct: 394 ISGANAGGNGNANSTASTGPEGRSAGSSGFTAGALGTAGKSESSVGNGGGKSRD-SFGEG 452

Query: 180 DNEDEIEGSKSDDENMLFGD 121
           + ++++E  + ++E  L  D
Sbjct: 453 NEDEDLEEEEEEEEEDLDDD 472


>ref|NP_595082.1| transcription factor TFIIF complex beta subunit Tfg2 (predicted)
           [Schizosaccharomyces pombe]
 sp|O94424.1|T2FB_SCHPO RecName: Full=Transcription initiation factor IIF subunit beta;
           AltName: Full=ATP-dependent helicase TFG2; AltName:
           Full=TFIIF medium subunit; AltName: Full=TFIIF-beta
 emb|CAB91188.1| transcription factor TFIIF complex beta subunit Tfg2 (predicted)
           [Schizosaccharomyces pombe]
          Length = 307

 Score = 95.1 bits (235), Expect = 2e-20
 Identities = 51/106 (48%), Positives = 62/106 (58%), Gaps = 13/106 (12%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEY- 301
           NEL+D+LF  FE Y YWTL+GL++Y KQPE YLK+VL+ IAIL+KRGPY   Y LKPEY 
Sbjct: 194 NELLDILFKCFEDYEYWTLKGLREYVKQPEVYLKEVLDSIAILNKRGPYALKYSLKPEYK 253

Query: 300 ------------SQQSSTASESIAPLGLEAPAAGVGSGNEGGDDDD 199
                        Q S + S SI   G        G+  E  +DDD
Sbjct: 254 GTMDAASVELRNQQASQSESSSIDHTGKNTSPDNPGTNAEEDEDDD 299


>emb|CDS10000.1| hypothetical protein LRAMOSA02677 [Lichtheimia ramosa]
          Length = 301

 Score = 94.7 bits (234), Expect = 2e-20
 Identities = 45/95 (47%), Positives = 64/95 (67%)
 Frame = -3

Query: 477 NELIDLLFGAFEKYTYWTLRGLKDYAKQPESYLKDVLNEIAILDKRGPYNNCYHLKPEYS 298
           NEL+D+LF AF++Y YW+ +GL ++ +QP  YLK+VLN+I IL+KRGPY   Y LKPEY 
Sbjct: 205 NELMDVLFVAFDRYPYWSFKGLLEHIRQPSQYLKEVLNDICILNKRGPYAGNYQLKPEYV 264

Query: 297 QQSSTASESIAPLGLEAPAAGVGSGNEGGDDDDYE 193
           Q+S+ A +S         A   G+ + G +D+D E
Sbjct: 265 QRSTAAEQS------SGAAKDSGTPSSGDEDEDEE 293


Top