BLASTX nr result

ID: Ophiopogon26_contig00039884 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00039884
         (529 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC50066.1| hypothetical protein: PROVISIONAL [Rhizophagus i...    67   3e-11
dbj|GBC16017.1| hypothetical protein: PROVISIONAL [Rhizophagus i...    62   1e-09

>dbj|GBC50066.1| hypothetical protein: PROVISIONAL [Rhizophagus irregularis DAOM
           181602]
          Length = 89

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 38/64 (59%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +1

Query: 340 VPDV*HGISKRTGSGRLDDGILEFETNRFPDV-WIKRTGSGRLDDETRNEPVPDVWIMEI 516
           VPDV   + + TGSGRLD+G         PDV  ++ TGSGRLD+  RNEPVPDVWIME+
Sbjct: 18  VPDV--RMMETTGSGRLDNGN---RNEPVPDVRMMETTGSGRLDNGNRNEPVPDVWIMEL 72

Query: 517 KTNR 528
           KTNR
Sbjct: 73  KTNR 76



 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 29/51 (56%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
 Frame = +2

Query: 365 RNEPVPDVWMMEFWNSKR--TGSRTFGLNEPVPDAWMMKLETNRFRTFG*W 511
           RNEPVPDV MME   S R   G+R    NEPVPD W+M+L+TNRF     W
Sbjct: 37  RNEPVPDVRMMETTGSGRLDNGNR----NEPVPDVWIMELKTNRFSPASTW 83


>dbj|GBC16017.1| hypothetical protein: PROVISIONAL [Rhizophagus irregularis DAOM
           181602]
          Length = 95

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 36/64 (56%), Positives = 39/64 (60%), Gaps = 12/64 (18%)
 Frame = +1

Query: 373 TGSGRLDDGIL-----------EFETNRFPDVWIKRT-GSGRLDDETRNEPVPDVWIMEI 516
           TGSGRLD+G             E      PDV +  T GSGRLD+  RNEPVPDVWIMEI
Sbjct: 4   TGSGRLDNGNRNEPVNSGRLDNELRNEPVPDVRMNETTGSGRLDNGNRNEPVPDVWIMEI 63

Query: 517 KTNR 528
           KTNR
Sbjct: 64  KTNR 67


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