BLASTX nr result

ID: Ophiopogon26_contig00039109 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00039109
         (653 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011628802.2| LOW QUALITY PROTEIN: early nodulin-like prot...    57   5e-06

>ref|XP_011628802.2| LOW QUALITY PROTEIN: early nodulin-like protein 2 [Amborella
           trichopoda]
          Length = 340

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 47/132 (35%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
 Frame = -1

Query: 542 PGGSPLGTPDLLSHLPSAISLHLERPSPLSSRPAATSGRSSPPDADHVPLNPSFPPWPVS 363
           P  SP  +P L    PS  SL     SP  S    +   S+P  A      PSF P P+S
Sbjct: 136 PSPSPKSSPSLA---PSPASLAPTSHSPSPSLAPTSPSPSNPSSASP----PSFAPLPLS 188

Query: 362 ALSLHDSAVDLYSTSPATPHQWATAGSSTLAYSSLISPLSDRAVAWISSAPPTPAPTFYA 183
             S   +     S +PA+P   A + S+ +  S + SP    + A ISS PPTP+P+   
Sbjct: 189 KSSPSFAPASSPSLAPASPSPSAPS-SAPIYQSPISSPTPSPSSAPISSEPPTPSPSSAP 247

Query: 182 LSLRPP-PEPSS 150
           +S  PP P PSS
Sbjct: 248 ISSEPPTPSPSS 259


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