BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00038908
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OVA10833.1| Reverse transcriptase zinc-binding domain [Maclea...    55   4e-06
gb|OVA18506.1| Reverse transcriptase zinc-binding domain [Maclea...    55   5e-06

>gb|OVA10833.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 314

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
 Frame = -3

Query: 379 PGSMMVLLSDWRDHHISNNVKLEWDMSVLAITWQIWREKNQRLFHHKFRNSLS----ILS 212
           PGS++ L   W  H  S   KL W     +I W IW E+N+R+F +K ++ ++    + S
Sbjct: 232 PGSVISLAHSWSSHGFSKTGKLLWQFVPASIFWVIWLERNRRIFDNKSKDPIALSHEVKS 291

Query: 211 YVHFFVSFWLQNIPIKLWRIFLN 143
            +HF+VS   +++ I L     N
Sbjct: 292 LIHFWVSSHYRDLKIPLHSFIFN 314


>gb|OVA18506.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 649

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
 Frame = -3

Query: 379 PGSMMVLLSDWRDHHISNNVKLEWDMSVLAITWQIWREKNQRLFHHKFRNSLS----ILS 212
           PGS++ L   W  H  S   KL W     +I W IW E+N+R+F +K ++ ++    + S
Sbjct: 567 PGSVISLAHSWSSHGFSKTGKLLWQFVPASIFWVIWLERNRRIFDNKSKDPIALSHEVKS 626

Query: 211 YVHFFVSFWLQNIPIKLWRIFLN 143
            +HF+VS   +++ I L     N
Sbjct: 627 LIHFWVSSHYRDLKIPLHSFIFN 649