BLASTX nr result

ID: Ophiopogon26_contig00038871 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00038871
         (609 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020242946.1| uncharacterized protein LOC109821168 [Aspara...    60   5e-07
ref|XP_020243014.1| zinc finger CCHC domain-containing protein 9...    54   5e-06
emb|CEF61611.1| Reverse transcriptase domain and Integrase, cata...    57   8e-06

>ref|XP_020242946.1| uncharacterized protein LOC109821168 [Asparagus officinalis]
          Length = 348

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = -3

Query: 445 CGYCKKSRHFKRDCRRKHGLCLRCGAKDHQVANCLSKHQEYPILALPTLPLSLI---PVQ 275
           C YCKK  H  +DCR+ +GLCL CGA DHQ+  C S+           +P         Q
Sbjct: 3   CHYCKKPGHLMKDCRKANGLCLICGAADHQLTTCPSRRVSGEASGGTIVPAGQARQDVQQ 62

Query: 274 ARSLTPSQDQVRQQTERNKSRY 209
            R   P+Q Q+ Q  +R   +Y
Sbjct: 63  RRPALPTQQQMFQNQQRRSGQY 84


>ref|XP_020243014.1| zinc finger CCHC domain-containing protein 9-like [Asparagus
           officinalis]
          Length = 101

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -3

Query: 445 CGYCKKSRHFKRDCRRKHGLCLRCGAKDHQVANCLSK 335
           C +C K  H  +DCRR +GLCL CG  DHQ+  C S+
Sbjct: 50  CHFCSKPGHLMKDCRRANGLCLACGVADHQITTCTSR 86


>emb|CEF61611.1| Reverse transcriptase domain and Integrase, catalytic core domain
           and Zinc finger, CCHC-type domain and Peptidase A2A,
           retrovirus, catalytic domain and Ribonuclease H-like
           domain and Peptidase A2A, retrovirus RVP subgroup domain
           and Aspartic peptidase domain-containing protein
           [Strongyloides ratti]
          Length = 1333

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = -3

Query: 445 CGYCKKSRHFKRDCRRKHGLCLRCGAKDHQVANCLSKHQEYP 320
           C YCKKS H   +CRRK+G CLRCGA DH++  C  ++ + P
Sbjct: 161 CSYCKKSNHTVDNCRRKNGECLRCGAGDHKLNECSQRNSKSP 202


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