BLASTX nr result
ID: Ophiopogon26_contig00038806
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00038806
(552 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009431210.1| RNA polymerase beta subunit (chloroplast) [M... 369 e-118
gb|AEX94360.1| RNA polymerase beta subunit (chloroplast) [Ophiop... 369 e-118
gb|OAY80287.1| DNA-directed RNA polymerase subunit beta [Ananas ... 355 e-118
gb|AEX94362.1| RNA polymerase beta subunit (chloroplast) [Sansev... 368 e-118
gb|AEX94361.1| RNA polymerase beta subunit (chloroplast) [Ruscus... 367 e-117
ref|YP_009432295.1| RNA polymerase beta subunit (chloroplast) [P... 366 e-117
ref|YP_009335325.1| RNA polymerase beta subunit (chloroplast) [N... 366 e-117
ref|YP_009183191.1| RNA polymerase beta subunit (chloroplast) [P... 366 e-117
ref|YP_009180100.1| RNA polymerase beta subunit (chloroplast) [P... 366 e-117
gb|AEX94359.1| RNA polymerase beta subunit (chloroplast) [Liriop... 366 e-117
gb|AFB18347.1| RNA polymerase beta subunit, partial (plastid) [N... 366 e-117
gb|AEX94356.1| RNA polymerase beta subunit (chloroplast) [Beauca... 366 e-117
gb|AON75791.1| RNA polymerase beta chain, partial (chloroplast) ... 341 e-117
gb|AEX94357.1| RNA polymerase beta subunit (chloroplast) [Dasyli... 365 e-117
ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia colli... 364 e-116
gb|AHE41622.1| RNA polymerase beta subunit protein, partial (chl... 349 e-116
gb|AQM54331.1| RNA polymerase beta subunit, partial (chloroplast... 339 e-116
gb|PHT36045.1| DNA-directed RNA polymerase subunit beta [Capsicu... 343 e-116
gb|AON75798.1| RNA polymerase beta chain, partial (chloroplast) ... 339 e-116
gb|AON75790.1| RNA polymerase beta chain, partial (chloroplast) ... 339 e-116
>ref|YP_009431210.1| RNA polymerase beta subunit (chloroplast) [Maianthemum bicolor]
gb|AEX94363.1| RNA polymerase beta subunit (chloroplast) [Maianthemum stellatum]
gb|ASW26646.1| RNA polymerase beta subunit (chloroplast) [Maianthemum bicolor]
Length = 1073
Score = 369 bits (946), Expect = e-118
Identities = 182/183 (99%), Positives = 182/183 (99%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>gb|AEX94360.1| RNA polymerase beta subunit (chloroplast) [Ophiopogon japonicus]
Length = 1073
Score = 369 bits (946), Expect = e-118
Identities = 182/183 (99%), Positives = 182/183 (99%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>gb|OAY80287.1| DNA-directed RNA polymerase subunit beta [Ananas comosus]
Length = 582
Score = 355 bits (912), Expect = e-118
Identities = 175/184 (95%), Positives = 179/184 (97%), Gaps = 1/184 (0%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGT DDMNHLKNKRIRSVADLLQDQFGLALVRLENA+RGTICGAIRHKLIPT
Sbjct: 295 HLIGMKFGMGTFDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIRHKLIPT 354
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 355 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 414
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKE-EARMIYL 14
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISE+ KE E +M+YL
Sbjct: 415 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISEKQKEKEPQMVYL 474
Query: 13 SQNR 2
S NR
Sbjct: 475 SPNR 478
>gb|AEX94362.1| RNA polymerase beta subunit (chloroplast) [Sansevieria trifasciata]
Length = 1073
Score = 368 bits (945), Expect = e-118
Identities = 181/183 (98%), Positives = 182/183 (99%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRS+ADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMGTLDDMNHLKNKRIRSIADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>gb|AEX94361.1| RNA polymerase beta subunit (chloroplast) [Ruscus aculeatus]
Length = 1073
Score = 367 bits (942), Expect = e-117
Identities = 181/183 (98%), Positives = 182/183 (99%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMI+LS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIFLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>ref|YP_009432295.1| RNA polymerase beta subunit (chloroplast) [Polygonatum
stenophyllum]
gb|ATB18550.1| RNA polymerase beta subunit (chloroplast) [Polygonatum
stenophyllum]
Length = 1073
Score = 366 bits (940), Expect = e-117
Identities = 181/183 (98%), Positives = 181/183 (98%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQ GLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>ref|YP_009335325.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
gb|APO12383.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
Length = 1073
Score = 366 bits (940), Expect = e-117
Identities = 181/183 (98%), Positives = 181/183 (98%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRIASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>ref|YP_009183191.1| RNA polymerase beta subunit (chloroplast) [Polygonatum
verticillatum]
ref|YP_009236352.1| RNA polymerase beta subunit (chloroplast) [Polygonatum sibiricum]
gb|ALM87708.1| RNA polymerase beta subunit (chloroplast) [Polygonatum
verticillatum]
gb|AMF84064.1| RNA polymerase beta subunit (chloroplast) [Polygonatum sibiricum]
Length = 1073
Score = 366 bits (940), Expect = e-117
Identities = 181/183 (98%), Positives = 181/183 (98%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQ GLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>ref|YP_009180100.1| RNA polymerase beta subunit (chloroplast) [Polygonatum cyrtonema]
gb|ALL96466.1| RNA polymerase beta subunit (chloroplast) [Polygonatum cyrtonema]
Length = 1073
Score = 366 bits (940), Expect = e-117
Identities = 181/183 (98%), Positives = 181/183 (98%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQ GLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQLGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>gb|AEX94359.1| RNA polymerase beta subunit (chloroplast) [Liriope spicata]
Length = 1073
Score = 366 bits (940), Expect = e-117
Identities = 181/183 (98%), Positives = 181/183 (98%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMK GMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKLGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>gb|AFB18347.1| RNA polymerase beta subunit, partial (plastid) [Nolina atopocarpa]
Length = 1080
Score = 366 bits (940), Expect = e-117
Identities = 181/183 (98%), Positives = 181/183 (98%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 300 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 359
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGR ASFRIR
Sbjct: 360 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRIASFRIR 419
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 420 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 479
Query: 10 QNR 2
NR
Sbjct: 480 PNR 482
>gb|AEX94356.1| RNA polymerase beta subunit (chloroplast) [Beaucarnea hookeri]
Length = 1073
Score = 366 bits (939), Expect = e-117
Identities = 181/183 (98%), Positives = 181/183 (98%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGM TLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMDTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
NR
Sbjct: 472 PNR 474
>gb|AON75791.1| RNA polymerase beta chain, partial (chloroplast) [Populus
tremuloides]
Length = 260
Score = 341 bits (874), Expect = e-117
Identities = 167/183 (91%), Positives = 173/183 (94%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL+RLEN +RGTICGAIRHKLIPT
Sbjct: 70 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALIRLENVVRGTICGAIRHKLIPT 129
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTST LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIR
Sbjct: 130 PQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIR 189
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSL IH +IGHWGS+ESPFYEIS RSK + RM+ LS
Sbjct: 190 DIHPSHYGRICPIDTSEGINVGLIGSLTIHAKIGHWGSLESPFYEISARSK-KVRMLSLS 248
Query: 10 QNR 2
NR
Sbjct: 249 PNR 251
>gb|AEX94357.1| RNA polymerase beta subunit (chloroplast) [Dasylirion wheeleri]
Length = 1073
Score = 365 bits (936), Expect = e-117
Identities = 180/183 (98%), Positives = 181/183 (98%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGM TLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT
Sbjct: 292 HLIGMKFGMDTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 351
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 352 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 411
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS
Sbjct: 412 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 471
Query: 10 QNR 2
N+
Sbjct: 472 PNK 474
>ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia collinsiana]
gb|AGE92676.1| RNA polymerase beta subunit (plastid) [Heliconia collinsiana]
Length = 1083
Score = 364 bits (935), Expect = e-116
Identities = 177/183 (96%), Positives = 182/183 (99%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRS+ADLLQDQFGLALVRLENA+RGTICGAIRHKLIPT
Sbjct: 293 HLIGMKFGMGTLDDMNHLKNKRIRSIADLLQDQFGLALVRLENAVRGTICGAIRHKLIPT 352
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 353 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 412
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEA+++YLS
Sbjct: 413 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEAQIVYLS 472
Query: 10 QNR 2
NR
Sbjct: 473 PNR 475
>gb|AHE41622.1| RNA polymerase beta subunit protein, partial (chloroplast)
[Cercidiphyllum japonicum]
Length = 520
Score = 349 bits (896), Expect = e-116
Identities = 172/183 (93%), Positives = 177/183 (96%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENA+RGTICGAIRHKLIPT
Sbjct: 275 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIRHKLIPT 334
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTST LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIR
Sbjct: 335 PQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIR 394
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIH RIGHWGS+ESPFYEISERSK + RM+YLS
Sbjct: 395 DIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERSK-KVRMLYLS 453
Query: 10 QNR 2
+R
Sbjct: 454 PSR 456
>gb|AQM54331.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
trichocarpa]
gb|AQM54333.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
ilicifolia]
gb|AQM54334.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
deltoides]
gb|AQM54335.1| RNA polymerase beta subunit, partial (chloroplast) [Populus nigra]
gb|AQM54336.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
pruinosa]
gb|AQM54337.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
balsamifera]
gb|AQM54338.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
angustifolia]
gb|AQM54339.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
mexicana]
gb|AQM54340.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
fremontii]
gb|AQM54341.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
wilsonii]
gb|AQM54342.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
pamirica]
gb|AQM54343.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
szechuanica]
gb|AQM54344.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
suaveolens]
gb|AQM54345.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
laurifolia]
gb|AQM54346.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
przewalskii]
gb|AQM54347.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
ussuriensis]
gb|AQM54348.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
simonii]
gb|AQM54349.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
talassica]
gb|AQM54350.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
tomentosa]
gb|AQM54351.1| RNA polymerase beta subunit, partial (chloroplast) [Populus
afghanica]
gb|AQM54352.1| RNA polymerase beta subunit, partial (chloroplast) [Populus alba]
Length = 250
Score = 339 bits (870), Expect = e-116
Identities = 167/183 (91%), Positives = 173/183 (94%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL+RLEN +RGTICGAIRHKLIPT
Sbjct: 69 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALIRLENVVRGTICGAIRHKLIPT 128
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTST LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIR
Sbjct: 129 PQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIR 188
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSL IH +IGH GS+ESPFYEIS RSK + RM+YLS
Sbjct: 189 DIHPSHYGRICPIDTSEGINVGLIGSLTIHAKIGHLGSLESPFYEISARSK-KVRMLYLS 247
Query: 10 QNR 2
NR
Sbjct: 248 PNR 250
>gb|PHT36045.1| DNA-directed RNA polymerase subunit beta [Capsicum baccatum]
Length = 353
Score = 343 bits (880), Expect = e-116
Identities = 169/183 (92%), Positives = 173/183 (94%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIG+KFGMG LDDMNHLKNKRIRSVADLLQDQFGLALVRLEN +RGTICGAIRHKLIPT
Sbjct: 27 HLIGLKFGMGALDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPT 86
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTST LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR
Sbjct: 87 PQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 146
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSLAIH RIGHWGS+ESPFYEISERS RM+YLS
Sbjct: 147 DIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERS-TGVRMLYLS 205
Query: 10 QNR 2
R
Sbjct: 206 PGR 208
>gb|AON75798.1| RNA polymerase beta chain, partial (chloroplast) [Populus
grandidentata]
Length = 260
Score = 339 bits (870), Expect = e-116
Identities = 167/183 (91%), Positives = 173/183 (94%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL+RLEN +RGTICGAIRHKLIPT
Sbjct: 70 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALIRLENVVRGTICGAIRHKLIPT 129
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTST LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIR
Sbjct: 130 PQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIR 189
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSL IH +IGH GS+ESPFYEIS RSK + RM+YLS
Sbjct: 190 DIHPSHYGRICPIDTSEGINVGLIGSLTIHAKIGHLGSLESPFYEISARSK-KVRMLYLS 248
Query: 10 QNR 2
NR
Sbjct: 249 PNR 251
>gb|AON75790.1| RNA polymerase beta chain, partial (chloroplast) [Populus
lasiocarpa]
gb|AON75792.1| RNA polymerase beta chain, partial (chloroplast) [Populus tremula]
gb|AON75793.1| RNA polymerase beta chain, partial (chloroplast) [Populus
davidiana]
gb|AON75794.1| RNA polymerase beta chain, partial (chloroplast) [Populus
euphratica]
gb|AON75795.1| RNA polymerase beta chain, partial (chloroplast) [Populus
adenopoda]
Length = 260
Score = 339 bits (870), Expect = e-116
Identities = 167/183 (91%), Positives = 173/183 (94%)
Frame = -3
Query: 550 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAIRGTICGAIRHKLIPT 371
HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL+RLEN +RGTICGAIRHKLIPT
Sbjct: 70 HLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALIRLENVVRGTICGAIRHKLIPT 129
Query: 370 PQNLVTSTSLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR 191
PQNLVTST LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIR
Sbjct: 130 PQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIR 189
Query: 190 DIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKEEARMIYLS 11
DIHPSHYGRICPIDTSEGINVGLIGSL IH +IGH GS+ESPFYEIS RSK + RM+YLS
Sbjct: 190 DIHPSHYGRICPIDTSEGINVGLIGSLTIHAKIGHLGSLESPFYEISARSK-KVRMLYLS 248
Query: 10 QNR 2
NR
Sbjct: 249 PNR 251