BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00038712
         (487 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...    57   3e-11
gb|KJB48829.1| hypothetical protein B456_008G089200 [Gossypium r...    57   2e-09
gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium bar...    64   9e-09
dbj|GAV78485.1| gag_pre-integrs domain-containing protein/UBN2_2...    46   1e-08
gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposo...    57   3e-08
gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]       55   4e-08
gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]    45   3e-07
gb|KJB72079.1| hypothetical protein B456_011G157200 [Gossypium r...    49   4e-07
gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]    43   1e-06
gb|KHN21425.1| Retrovirus-related Pol polyprotein from transposo...    54   4e-06

>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 57.0 bits (136), Expect(2) = 3e-11
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
 Frame = +1

Query: 127 INDENWVEMIEKALMAIRFCLVDTTLRSLSEEVLDKSIDSETMPLPPRARRYSNQVLNCR 306
           + DE W E+ EKAL AI+ CL    LR ++ E    ++  +   L       +   L  R
Sbjct: 48  MTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKER 107

Query: 307 IYLY------------------YQKIDKVETKTEDKDQALLLLCSLPSSYKRFREEIIYE 432
           +Y                       ++ +E K +D+D+A+LL+ SLPS+YK F+E ++Y 
Sbjct: 108 LYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYS 167

Query: 433 DKNSI 447
           + +++
Sbjct: 168 NNDTL 172



 Score = 38.9 bits (89), Expect(2) = 3e-11
 Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = +3

Query: 3   FDIQKFDD-INFNRCQLSMNVILTQ*ELKKALFGKEKKP 116
           FDI+KFD  I F+  ++ M  +LTQ  LKKAL GK KKP
Sbjct: 7   FDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKP 45


>gb|KJB48829.1| hypothetical protein B456_008G089200 [Gossypium raimondii]
          Length = 164

 Score = 57.4 bits (137), Expect(2) = 2e-09
 Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
 Frame = +1

Query: 127 INDENWVEMIEKALMAIRFCLVDTTLRSLSEEVLDKSIDSETMPLPPRARRYSNQVLNCR 306
           +N   W E+  KAL  I+ CL +T L+ +  E    ++      L       +  VL   
Sbjct: 45  LNKTKWEELDGKALSVIQLCLANTVLQEVLMEKTSSALWKRLETLYATKSLANRLVLKQH 104

Query: 307 IYLYYQK------------------IDKVETKTEDKDQALLLLCSLPSSYKRFREEIIY 429
           ++ +                     + KVE   +D+DQA+LLLCSLP SYK F+E +IY
Sbjct: 105 LFTFRMNEGEILRDHISQFITLLNDLKKVEVHIDDEDQAMLLLCSLPPSYKSFKEILIY 163



 Score = 32.3 bits (72), Expect(2) = 2e-09
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 3   FDIQKFD-DINFNRCQLSMNVILTQ*ELKKALFGKEKKPSTIYK 131
           F+I+KFD + NFN  Q+ M  IL Q  LKK +    KKP  + K
Sbjct: 6   FEIEKFDGETNFNLWQVRMMAILVQSGLKKVV--TRKKPENLNK 47


>gb|PPD88818.1| hypothetical protein GOBAR_DD14224 [Gossypium barbadense]
          Length = 718

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 19/125 (15%)
 Frame = +1

Query: 127 INDENWVEMIEKALMAIRFCLVDTTLRSLSEEVLDKSIDSETMPLPPRARRYSNQVLNCR 306
           +N   W E+ EKAL AI+ CL +T L+ +  E    ++      L       +  VL  R
Sbjct: 314 LNQTEWEELDEKALSAIQLCLTNTVLQDVLMEKTSFALWKRLETLYATKSLANRLVLKQR 373

Query: 307 IYLYYQK------------------IDKVETKTEDKDQALLLLCSLPSSYKRFREEIIY- 429
           ++ +                     +  VE   +D+DQA+LLLCSLPSSYK F+E +IY 
Sbjct: 374 LFTFRMNEGELLKDHISQFITLLNDLKNVEVHIDDEDQAMLLLCSLPSSYKSFKETLIYG 433

Query: 430 EDKNS 444
           +DK S
Sbjct: 434 KDKLS 438


>dbj|GAV78485.1| gag_pre-integrs domain-containing protein/UBN2_2 domain-containing
           protein, partial [Cephalotus follicularis]
          Length = 271

 Score = 46.2 bits (108), Expect(2) = 1e-08
 Identities = 18/34 (52%), Positives = 28/34 (82%)
 Frame = +1

Query: 328 IDKVETKTEDKDQALLLLCSLPSSYKRFREEIIY 429
           +++++ K +D+DQ LLLLCSLP S+K FR+ +IY
Sbjct: 40  LNRIDVKLKDEDQTLLLLCSLPPSFKHFRDTMIY 73



 Score = 40.4 bits (93), Expect(2) = 1e-08
 Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 LKKSLINRLILKQCLF-LRVQEGTPIKS*IAEFTS 316
           L KSL N+L+LKQ L+ LR+ EGT +KS IAEF S
Sbjct: 1   LTKSLTNKLLLKQQLYALRISEGTSVKSHIAEFNS 35


>gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 262

 Score = 57.0 bits (136), Expect(2) = 3e-08
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
 Frame = +1

Query: 127 INDENWVEMIEKALMAIRFCLVDTTLRSLSEEVLDKSIDSETMPLPPRARRYSNQVLNCR 306
           + DE W E+ EKAL AI+ CL    LR ++ E    ++  +   L       +   L  R
Sbjct: 24  MTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKER 83

Query: 307 IYLY------------------YQKIDKVETKTEDKDQALLLLCSLPSSYKRFREEIIYE 432
           +Y                       ++ +E K +D+D+A+LL+ SLPS+YK F+E ++Y 
Sbjct: 84  LYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYS 143

Query: 433 DKNSI 447
           + +++
Sbjct: 144 NNDTL 148



 Score = 28.5 bits (62), Expect(2) = 3e-08
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +3

Query: 54  MNVILTQ*ELKKALFGKEKKP 116
           M  +LTQ  LKKAL GK KKP
Sbjct: 1   MKAVLTQNGLKKALDGKAKKP 21


>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
          Length = 289

 Score = 55.1 bits (131), Expect(2) = 4e-08
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
 Frame = +1

Query: 127 INDENWVEMIEKALMAIRFCLVDTTLRSLSEEVLDKSIDSETMPLPPRARRYSNQVLNCR 306
           + +E+W ++ ++AL  I+ CL +  ++ +  E     + S+   L       +  +L  R
Sbjct: 40  MTEEDWNQLEDRALTTIQLCLTNEVMQEVLTEKTTADLWSKLEDLYLMKSLTNRLLLKQR 99

Query: 307 IYLYYQK------------------IDKVETKTEDKDQALLLLCSLPSSYKRFREEIIY 429
           +Y  +                    + K++ K  D+DQALLLLCSL  SYK FR+ +IY
Sbjct: 100 LYTLWMSEGTPIKSHIGEFNSVITYLSKIDVKINDEDQALLLLCSLLPSYKHFRDTMIY 158



 Score = 30.0 bits (66), Expect(2) = 4e-08
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +3

Query: 3   FDIQKFDDINFNRCQLSMNVILTQ*ELKKALFGKEKKPSTI 125
           ++I+KF+D        +++  L +  LKKALFGK KKP T+
Sbjct: 8   WNIEKFED--------NISFSLWESGLKKALFGKSKKPVTM 40


>gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]
          Length = 707

 Score = 44.7 bits (104), Expect(2) = 3e-07
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 18/117 (15%)
 Frame = +1

Query: 133 DENWVEMIEKALMAIRFCLVDTTLRSLSEEVLDKSIDSETMPLPPRARRYSNQVLNCRIY 312
           +E W E  EKAL  I+ CL    LR +  E     I S+   L       +   L  R++
Sbjct: 48  EEQWEETDEKALSTIQLCLSREVLREVINEKTAAGIWSKLESLYMTKSLANKLRLKERLF 107

Query: 313 LYYQK------------------IDKVETKTEDKDQALLLLCSLPSSYKRFREEIIY 429
                                  ++ ++ + +D+D+A+LL+ SLP SY+ F+E ++Y
Sbjct: 108 TLRMSEGTPIQSHLGEFNSIIIDLENLDVEIDDEDKAVLLIVSLPPSYRHFKEIMLY 164



 Score = 37.4 bits (85), Expect(2) = 3e-07
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 3   FDIQKFDD-INFNRCQLSMNVILTQ*ELKKALFGKEKKPST 122
           FDI+KFD  I+F   ++ M  +LTQ  LKK L GK  KP+T
Sbjct: 5   FDIEKFDGKISFAIWRVQMLAVLTQNGLKKVLSGKSAKPAT 45


>gb|KJB72079.1| hypothetical protein B456_011G157200 [Gossypium raimondii]
          Length = 568

 Score = 48.5 bits (114), Expect(2) = 4e-07
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = +1

Query: 319 YQKIDKVETKTEDKDQALLLLCSLPSSYKRFREEIIY-EDKNSIHPFI 459
           ++ +  +E K  D+DQ +LLLC LPSSYK FRE +IY  DK S    +
Sbjct: 265 FKDLKNIEVKINDEDQTILLLCFLPSSYKSFRETLIYGRDKLSFEDLL 312



 Score = 33.1 bits (74), Expect(2) = 4e-07
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = +2

Query: 191 WTRL*DHYLKKSLINRLILKQCLF 262
           W RL   Y   SL NRL+LKQCLF
Sbjct: 221 WKRLEIFYATNSLANRLVLKQCLF 244


>gb|EOY34202.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
          Length = 698

 Score = 42.7 bits (99), Expect(2) = 1e-06
 Identities = 21/53 (39%), Positives = 30/53 (56%)
 Frame = +1

Query: 328 IDKVETKTEDKDQALLLLCSLPSSYKRFREEIIYEDKNSIHPFIYSSTDTFTF 486
           +  ++ K ED+D AL+LLCSLP SY+ F + ++Y              DTFTF
Sbjct: 134 LKNIDVKIEDEDLALILLCSLPPSYENFMDTMLY------------GRDTFTF 174



 Score = 37.4 bits (85), Expect(2) = 1e-06
 Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = +2

Query: 185 AWWTRL*DHYLKKSLINRLILKQCLF-LRVQEGTPIKS*IAEF 310
           A W +L   Y+ KSL+NRL +KQ L+ L++ EGT + + I EF
Sbjct: 85  AVWLKLKSIYMTKSLMNRLYIKQRLYTLKMSEGTSVNTHIDEF 127


>gb|KHN21425.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 126

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
 Frame = +1

Query: 151 MIEKALMAIRFCLVDTTLRSLSEEVLDKSIDSETMPLPPRARRYSNQVLNCRIYL---YY 321
           +++KA  AI   L D  LR + +E     I  +   L      Y  + L  R+YL    Y
Sbjct: 1   LMDKAHTAIILSLRDEVLRQVLKEKTTSGIWLKLEGL------YMTKSLVNRLYLKQALY 54

Query: 322 QKIDKVETKTEDKDQALLLLCSLPSSYKRFREEIIY 429
            +  KVE   +D+DQALLLLC+LP S+  F+E ++Y
Sbjct: 55  SRCKKVELNIDDEDQALLLLCALPKSFSHFKEALLY 90