BLASTX nr result

ID: Ophiopogon26_contig00038504 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00038504
         (352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    83   5e-16
ref|XP_020272188.1| uncharacterized protein LOC109847370 [Aspara...    78   2e-14
gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagu...    67   1e-10
gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagu...    65   5e-10
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o...    64   2e-09
gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officin...    59   2e-08
gb|ONK57060.1| uncharacterized protein A4U43_C10F16200 [Asparagu...    56   1e-06

>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = +1

Query: 13  FLVAGTMKDQNPIIFGKARSQTVVAPESDEEDERPQFYRYSRAAQRIMALMGYNLMWGGG 192
           + V    K Q  I FG+ + + +    S+E+D  PQF+ +   + ++M  MGYN     G
Sbjct: 433 YKVPSKRKGQKLIQFGRVKPEQLKRGSSEEDDGVPQFHYHEPNSIQLMKRMGYNFNEKRG 492

Query: 193 LNFDKGRCLPLR-PFVPKGKPENYYDKTRRGLGYV-TPTESDDEM 321
           LNF KGR  P+R    P+GKP++YY KTR GLGYV TP+ S+DE+
Sbjct: 493 LNFGKGRRTPVRMSLAPEGKPQDYYHKTRSGLGYVTTPSASEDEI 537


>ref|XP_020272188.1| uncharacterized protein LOC109847370 [Asparagus officinalis]
          Length = 611

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = +1

Query: 145 QRIMALMGYNLMWGGGLNFDKGRCLPLRPFVPKGKPENYYDKTRRGLGYVTP 300
           +RIM  +GY     GGLNF KG+  PL PFVPKGKP+NYYDKTR+GLGYV+P
Sbjct: 2   RRIMQKIGYYFSNAGGLNFGKGQRTPLAPFVPKGKPDNYYDKTRKGLGYVSP 53


>gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagus officinalis]
          Length = 1510

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
 Frame = +1

Query: 10   SFLVAGTMKDQNPIIFGKARSQTVVAP--ESDEEDERP--QFYRYSRAAQRIMALMGYNL 177
            + ++   ++    +I+GK +S  +       DE+D++P     +YS  A+++M   GY+ 
Sbjct: 1121 TMVIPNKVRGAKEVIYGKGKSSPLPDHFLSEDEDDDKPGRHLSKYSPEARKLMEKQGYDF 1180

Query: 178  MWGGGLNFDKGRCLPLRP-FVPKGKPENYYDKTRRGLGYVTPTESDDE 318
              G GL FD+G   P +  +VPKGKPE+YY K  RGLGYV+   SDDE
Sbjct: 1181 TLGEGLYFDRGPRNPAKAVYVPKGKPEDYY-KYGRGLGYVS---SDDE 1224


>gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagus officinalis]
          Length = 254

 Score = 64.7 bits (156), Expect = 5e-10
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
 Frame = +1

Query: 49  IIFGKARSQTV----VAPESDEEDERPQFYRYSRAAQRIMALMGYNLMWGGGLNFDKGRC 216
           +++GK +   +    +  E DE+   P  +RY   A+ ++   GY+   G GL F +G  
Sbjct: 50  VVYGKGKEAPIPDHFLEEEDDEDKPAPHLFRYDAKARDLVEKYGYDFTLGEGLFFGRGPR 109

Query: 217 LPLR-PFVPKGKPENYYDKTRRGLGYVTPTESDDE 318
           +P R  +VPKGKP++YY + +RGLGYV  + SDDE
Sbjct: 110 VPPRLAYVPKGKPDDYY-RHKRGLGYV--SSSDDE 141


>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1146

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
 Frame = +1

Query: 40  QNPIIFGKARSQTVVAP--ESDEEDERP--QFYRYSRAAQRIMALMGYNLMWGGGLNFDK 207
           Q  +++GK     +       DE D++P     +YS  A+++M   GY+   G GL FD+
Sbjct: 268 QREVVYGKGEGFPLPDHFLREDENDDKPGRHLSKYSPEARKLMEKQGYDFTLGEGLYFDR 327

Query: 208 GRCLPLRP-FVPKGKPENYYDKTRRGLGYVTPTESD 312
           G  +P +  +VPKGKP++YY K RRGLGY + +E +
Sbjct: 328 GPRIPAKAAYVPKGKPDDYY-KFRRGLGYESSSEDE 362


>gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officinalis]
          Length = 125

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = +1

Query: 151 IMALMGYNLMWGGGLNFDKGRCLPLRP-FVPKGKPENYYDKTRRGLGYVTP 300
           +M  +GY+     GLNF KGR +P++  +VP+GKPE+YY KT RGLGY +P
Sbjct: 4   LMKKIGYDFTRKEGLNFGKGRKIPIKHVYVPEGKPEDYYHKTHRGLGYESP 54


>gb|ONK57060.1| uncharacterized protein A4U43_C10F16200 [Asparagus officinalis]
          Length = 427

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 26/48 (54%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
 Frame = +1

Query: 151 IMALMGYNLMWGGGLNFDKGRCLPLRP-FVPKGKPENYYDKTRRGLGY 291
           +M+ MGY+L    GLN+ +GR   ++P +VPKGKP NY+++TRRGLGY
Sbjct: 1   MMSDMGYDLTRLEGLNYGRGRKTVIKPAYVPKGKPSNYFNRTRRGLGY 48


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