BLASTX nr result
ID: Ophiopogon26_contig00038038
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00038038
(417 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009242019.1| cytochrome c oxidase subunit 2 (mitochondrio... 96 2e-22
ref|YP_009242009.1| cytochrome c oxidase subunit 2 (mitochondrio... 96 2e-22
gb|OIT36919.1| hypothetical protein A4A49_63655 [Nicotiana atten... 88 6e-22
gb|OIS95698.1| hypothetical protein A4A49_52417 [Nicotiana atten... 81 1e-19
gb|OIT38890.1| hypothetical protein A4A49_58330 [Nicotiana atten... 86 8e-19
emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera] 87 1e-18
gb|OIT36241.1| hypothetical protein A4A49_52119 [Nicotiana atten... 73 2e-17
gb|ERM95510.1| hypothetical protein AMTR_s00151p00074930 [Ambore... 81 1e-16
gb|ONM18257.1| cytochrome oxidase 2 [Zea mays] 80 1e-14
gb|PAN46628.1| hypothetical protein PAHAL_I02913 [Panicum hallii] 72 3e-14
gb|PHU08201.1| Mediator of RNA polymerase II transcription subun... 69 5e-11
gb|PHT52183.1| Mediator of RNA polymerase II transcription subun... 52 2e-10
gb|KUM49906.1| hypothetical protein ABT39_MTgene3133 (mitochondr... 63 3e-10
gb|OIS95697.1| hypothetical protein A4A49_58636 [Nicotiana atten... 59 6e-09
gb|OIT36918.1| hypothetical protein A4A49_63653 [Nicotiana atten... 59 6e-09
gb|PHU10056.1| cytochrome c oxidase subunit 2 [Capsicum chinense] 62 2e-08
gb|OIT38895.1| hypothetical protein A4A49_58325 [Nicotiana atten... 56 6e-08
gb|OIS98128.1| hypothetical protein A4A49_05149 [Nicotiana atten... 53 1e-06
>ref|YP_009242019.1| cytochrome c oxidase subunit 2 (mitochondrion) [Oryza minuta]
gb|AMQ23373.1| cytochrome c oxidase subunit 2 (mitochondrion) [Oryza minuta]
Length = 685
Score = 95.9 bits (237), Expect(2) = 2e-22
Identities = 52/64 (81%), Positives = 52/64 (81%)
Frame = +2
Query: 116 DLTASPVTFRNGGSPLATTTVVVAELLGQERTTXXXXXXFFASGTEVLR*VTAGTST*PK 295
DL A PVTFRNGGSPLATTTVVVAELLGQERTT FFASGTEVLR V A TST PK
Sbjct: 241 DLRAGPVTFRNGGSPLATTTVVVAELLGQERTTCCSCSSFFASGTEVLRLVRARTSTSPK 300
Query: 296 GTSA 307
GTSA
Sbjct: 301 GTSA 304
Score = 37.4 bits (85), Expect(2) = 2e-22
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 339 EKQGMS*TVGGQRKRIDLFIE 401
EKQGMS TVGGQRKRIDL I+
Sbjct: 315 EKQGMSSTVGGQRKRIDLSIQ 335
Score = 76.6 bits (187), Expect = 2e-13
Identities = 39/55 (70%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 YLFSVW-SDIRKIDAKPAMSDNGAEVVNLSAPQQWHTTVGPNGQPRYLSEWGIPV 162
YLFSVW SDIRKIDAKPAMSDNGA VVNLSAPQQWHTT+ P G P+
Sbjct: 202 YLFSVWWSDIRKIDAKPAMSDNGASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPL 256
>ref|YP_009242009.1| cytochrome c oxidase subunit 2 (mitochondrion) [Oryza minuta]
gb|AMA06725.1| cytochrome c oxidase subunit 2 (mitochondrion) [Oryza minuta]
Length = 685
Score = 95.9 bits (237), Expect(2) = 2e-22
Identities = 52/64 (81%), Positives = 52/64 (81%)
Frame = +2
Query: 116 DLTASPVTFRNGGSPLATTTVVVAELLGQERTTXXXXXXFFASGTEVLR*VTAGTST*PK 295
DL A PVTFRNGGSPLATTTVVVAELLGQERTT FFASGTEVLR V A TST PK
Sbjct: 241 DLRAGPVTFRNGGSPLATTTVVVAELLGQERTTCCSCSSFFASGTEVLRYVRARTSTSPK 300
Query: 296 GTSA 307
GTSA
Sbjct: 301 GTSA 304
Score = 37.4 bits (85), Expect(2) = 2e-22
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 339 EKQGMS*TVGGQRKRIDLFIE 401
EKQGMS TVGGQRKRIDL I+
Sbjct: 315 EKQGMSSTVGGQRKRIDLSIQ 335
Score = 76.6 bits (187), Expect = 2e-13
Identities = 39/55 (70%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 YLFSVW-SDIRKIDAKPAMSDNGAEVVNLSAPQQWHTTVGPNGQPRYLSEWGIPV 162
YLFSVW SDIRKIDAKPAMSDNGA VVNLSAPQQWHTT+ P G P+
Sbjct: 202 YLFSVWWSDIRKIDAKPAMSDNGASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPL 256
>gb|OIT36919.1| hypothetical protein A4A49_63655 [Nicotiana attenuata]
Length = 141
Score = 88.2 bits (217), Expect(2) = 6e-22
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -1
Query: 297 PFGQVLVPAVTYRRTSVPEAKKXXXXXQVVLSWPSSSATTTVVVANGDPPFRKVTGLAVR 118
P +LVPAVTYRRTSVPEAKK +VVLS PSSSATTTVVVANGDPPFRKVT AVR
Sbjct: 58 PSVNLLVPAVTYRRTSVPEAKKEEQEQEVVLSRPSSSATTTVVVANGDPPFRKVTRPAVR 117
Query: 117 S 115
S
Sbjct: 118 S 118
Score = 43.5 bits (101), Expect(2) = 6e-22
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -2
Query: 110 VVCHCCGADRFTTSAPLSDIAG 45
VV HC GADRFTTSAPLSDIAG
Sbjct: 120 VVYHCYGADRFTTSAPLSDIAG 141
>gb|OIS95698.1| hypothetical protein A4A49_52417 [Nicotiana attenuata]
Length = 141
Score = 80.9 bits (198), Expect(2) = 1e-19
Identities = 45/61 (73%), Positives = 47/61 (77%)
Frame = -1
Query: 297 PFGQVLVPAVTYRRTSVPEAKKXXXXXQVVLSWPSSSATTTVVVANGDPPFRKVTGLAVR 118
P +LVP VTYRRTSVPEAK +VVLS PSSSATTTVVVANGD PFRKVT AVR
Sbjct: 58 PSVNLLVPVVTYRRTSVPEAKNEEQEQEVVLSRPSSSATTTVVVANGDLPFRKVTRPAVR 117
Query: 117 S 115
S
Sbjct: 118 S 118
Score = 43.5 bits (101), Expect(2) = 1e-19
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -2
Query: 110 VVCHCCGADRFTTSAPLSDIAG 45
VV HC GADRFTTSAPLSDIAG
Sbjct: 120 VVYHCYGADRFTTSAPLSDIAG 141
>gb|OIT38890.1| hypothetical protein A4A49_58330 [Nicotiana attenuata]
Length = 141
Score = 86.3 bits (212), Expect = 8e-19
Identities = 51/78 (65%), Positives = 54/78 (69%)
Frame = -1
Query: 297 PFGQVLVPAVTYRRTSVPEAKKXXXXXQVVLSWPSSSATTTVVVANGDPPFRKVTGLAVR 118
P +LVP VTYRRTSVPEAKK +VVLS PSSSATTTVVVANGDP FRKVT LAVR
Sbjct: 58 PSVNLLVPGVTYRRTSVPEAKKEEREQEVVLSRPSSSATTTVVVANGDPLFRKVTRLAVR 117
Query: 117 SDSCMPLLWCR*IHYFSA 64
S HY+SA
Sbjct: 118 SKVV--------YHYYSA 127
>emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]
Length = 201
Score = 87.4 bits (215), Expect = 1e-18
Identities = 38/49 (77%), Positives = 39/49 (79%)
Frame = +1
Query: 115 GPNGQPRYLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXXRFGDGGPT 261
GPNG+P LSEWGIPVGNNHGSSCGTTGPGEDN RFGDGGPT
Sbjct: 60 GPNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNLLFLLLFLRFGDGGPT 108
>gb|OIT36241.1| hypothetical protein A4A49_52119 [Nicotiana attenuata]
Length = 141
Score = 72.8 bits (177), Expect(2) = 2e-17
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = -1
Query: 297 PFGQVLVPAVTYRRTSVPEAKKXXXXXQVVLSWPSSSATTTVVVANGDPPFRKVTGLAVR 118
P +LVP TYRRTSVPEAKK +VVLS S SATTTVVVAN PPFRKVT AVR
Sbjct: 58 PSVNLLVPTATYRRTSVPEAKKEEQEQEVVLSRLSRSATTTVVVANRVPPFRKVTRPAVR 117
Query: 117 S 115
S
Sbjct: 118 S 118
Score = 43.5 bits (101), Expect(2) = 2e-17
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -2
Query: 110 VVCHCCGADRFTTSAPLSDIAG 45
VV HC GADRFTTSAPLSDIAG
Sbjct: 120 VVYHCYGADRFTTSAPLSDIAG 141
>gb|ERM95510.1| hypothetical protein AMTR_s00151p00074930 [Amborella trichopoda]
Length = 160
Score = 81.3 bits (199), Expect = 1e-16
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = +1
Query: 139 LSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXXRFGDGGPTVGNSRHKHL 288
LS+WGIP+GNNHGSSC TTGPGE+N RFGDGGPTV NSRHK L
Sbjct: 88 LSKWGIPIGNNHGSSCETTGPGEENQLFLVLCLRFGDGGPTVCNSRHKAL 137
>gb|ONM18257.1| cytochrome oxidase 2 [Zea mays]
Length = 507
Score = 79.7 bits (195), Expect = 1e-14
Identities = 41/49 (83%), Positives = 41/49 (83%)
Frame = +2
Query: 116 DLTASPVTFRNGGSPLATTTVVVAELLGQERTTXXXXXXFFASGTEVLR 262
DL A PVTFRNGGSPLATTTVVVAELLGQERTT FFASGTEVLR
Sbjct: 347 DLRAGPVTFRNGGSPLATTTVVVAELLGQERTTCCSCSSFFASGTEVLR 395
Score = 76.6 bits (187), Expect = 2e-13
Identities = 39/55 (70%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 YLFSVW-SDIRKIDAKPAMSDNGAEVVNLSAPQQWHTTVGPNGQPRYLSEWGIPV 162
YLFSVW SDIRKIDAKPAMSDNGA VVNLSAPQQWHTT+ P G P+
Sbjct: 308 YLFSVWWSDIRKIDAKPAMSDNGASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPL 362
>gb|PAN46628.1| hypothetical protein PAHAL_I02913 [Panicum hallii]
Length = 70
Score = 72.4 bits (176), Expect = 3e-14
Identities = 38/49 (77%), Positives = 38/49 (77%)
Frame = +2
Query: 116 DLTASPVTFRNGGSPLATTTVVVAELLGQERTTXXXXXXFFASGTEVLR 262
DL A PVTFRNGG PLATT VVVAELL QERTT FFASGTEVLR
Sbjct: 22 DLRAGPVTFRNGGFPLATTMVVVAELLDQERTTSCSCSSFFASGTEVLR 70
>gb|PHU08201.1| Mediator of RNA polymerase II transcription subunit 20a [Capsicum
chinense]
Length = 440
Score = 69.3 bits (168), Expect = 5e-11
Identities = 47/104 (45%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Frame = -1
Query: 297 PFGQVLVPAVTYRRTSVPEAKKXXXXXQVVLS----------WPSSSATTTVVVANGDPP 148
P +LVP VTYRRTSVP+AKK + +LS PSSS+TTTVVVANG PP
Sbjct: 334 PSVNLLVPTVTYRRTSVPKAKKEEQEQEFILSNQSSGFPLLSRPSSSSTTTVVVANGHPP 393
Query: 147 FRKVTGLAVRSDSCMPLLWCR*IHYFSAVIGHCRLSIYFSYIAP 16
FRKVT A R S V+ HC + F+ +AP
Sbjct: 394 FRKVTRPAFR----------------SKVVYHCYGADRFTTLAP 421
>gb|PHT52183.1| Mediator of RNA polymerase II transcription subunit 20b [Capsicum
baccatum]
Length = 387
Score = 52.4 bits (124), Expect(2) = 2e-10
Identities = 33/57 (57%), Positives = 36/57 (63%), Gaps = 10/57 (17%)
Frame = -1
Query: 255 TSVPEAKKXXXXXQVVLS----------WPSSSATTTVVVANGDPPFRKVTGLAVRS 115
TSVP+AKK + VLS PSSS+TTTVVVANG PPFRKVT A RS
Sbjct: 295 TSVPKAKKEEQEQEFVLSNQSSGFPLLSRPSSSSTTTVVVANGHPPFRKVTRPAFRS 351
Score = 40.4 bits (93), Expect(2) = 2e-10
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2
Query: 110 VVCHCCGADRFTTSAPLSDIAGL 42
VV HC GADRFTTSAPLSDI L
Sbjct: 353 VVYHCYGADRFTTSAPLSDIGTL 375
>gb|KUM49906.1| hypothetical protein ABT39_MTgene3133 (mitochondrion) [Picea
glauca]
Length = 83
Score = 62.8 bits (151), Expect = 3e-10
Identities = 35/53 (66%), Positives = 37/53 (69%)
Frame = -2
Query: 161 TGIPHSER*RGWPLGPTVVCHCCGADRFTTSAPLSDIAGLASIFRISLHTEKR 3
+GIPHSER RG P+ VVC ADRFTT APLSDIAG ASI RISL R
Sbjct: 18 SGIPHSERLRGRPVRSEVVCLPLPADRFTTPAPLSDIAGWASISRISLAAAHR 70
>gb|OIS95697.1| hypothetical protein A4A49_58636 [Nicotiana attenuata]
Length = 68
Score = 58.9 bits (141), Expect = 6e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 94 VVPIDSLLQRRYRTLQA*HLFFVYRSTPRRG 2
+VPIDSLLQRRYRTLQA HLF VYRSTPRRG
Sbjct: 1 MVPIDSLLQRRYRTLQAEHLFLVYRSTPRRG 31
>gb|OIT36918.1| hypothetical protein A4A49_63653 [Nicotiana attenuata]
Length = 68
Score = 58.9 bits (141), Expect = 6e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 94 VVPIDSLLQRRYRTLQA*HLFFVYRSTPRRG 2
+VPIDSLLQRRYRTLQA HLF VYRSTPRRG
Sbjct: 1 MVPIDSLLQRRYRTLQAEHLFLVYRSTPRRG 31
>gb|PHU10056.1| cytochrome c oxidase subunit 2 [Capsicum chinense]
Length = 381
Score = 61.6 bits (148), Expect = 2e-08
Identities = 38/71 (53%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Frame = +2
Query: 116 DLTASPVTFRNGGSPLATTTVVVAELLGQE----------RTTXXXXXXFFASGTEVLR* 265
DLT V FR+ GSPLATTT VV ++ G+E RTT FFASGTE+LR
Sbjct: 193 DLTTDLVNFRHEGSPLATTTEVVEKIPGREKSEKPLDWLERTTSCSCSSFFASGTEILRQ 252
Query: 266 VTAGTST*PKG 298
VTAGTS KG
Sbjct: 253 VTAGTSKLTKG 263
>gb|OIT38895.1| hypothetical protein A4A49_58325 [Nicotiana attenuata]
Length = 68
Score = 56.2 bits (134), Expect = 6e-08
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -3
Query: 94 VVPIDSLLQRRYRTLQA*HLFFVYRSTPRRG 2
+VPIDSLLQRRYRTLQA H+F VY STPRRG
Sbjct: 1 MVPIDSLLQRRYRTLQAEHIFLVYHSTPRRG 31
>gb|OIS98128.1| hypothetical protein A4A49_05149 [Nicotiana attenuata]
Length = 71
Score = 53.1 bits (126), Expect = 1e-06
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 94 VVPIDSLLQRRYRTLQA*HLFFVYRSTPRRG 2
+V IDSLLQRRYRTLQA HLF VY STPRRG
Sbjct: 1 MVLIDSLLQRRYRTLQAEHLFLVYHSTPRRG 31