BLASTX nr result
ID: Ophiopogon26_contig00037515
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00037515
(380 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK64083.1| uncharacterized protein A4U43_C07F21910 [Asparagu... 66 9e-12
ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|... 59 5e-11
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 62 1e-10
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar... 57 3e-09
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 60 9e-08
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 55 2e-07
gb|KYP69994.1| Retrovirus-related Pol polyprotein from transposo... 55 2e-07
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 58 3e-07
gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposo... 52 8e-07
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo... 49 1e-06
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo... 49 1e-06
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo... 49 1e-06
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo... 49 1e-06
ref|XP_018506066.1| PREDICTED: dirigent protein 2-like [Pyrus x ... 55 1e-06
gb|PHT74695.1| putative ATP-dependent RNA helicase DHX37 [Capsic... 52 1e-06
gb|PHT64729.1| TMV resistance protein N [Capsicum annuum] 56 2e-06
gb|KYP33707.1| Retrovirus-related Pol polyprotein from transposo... 52 3e-06
ref|XP_016466915.1| PREDICTED: uncharacterized protein LOC107789... 55 3e-06
gb|KFD67433.1| hypothetical protein M514_20469 [Trichuris suis] 46 3e-06
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 52 3e-06
>gb|ONK64083.1| uncharacterized protein A4U43_C07F21910 [Asparagus officinalis]
Length = 162
Score = 66.2 bits (160), Expect(2) = 9e-12
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1
Query: 175 RWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKD 297
RWM+ MEEE+ S+ KNDTWKLAKL KGKK IGCK ++ KKD
Sbjct: 72 RWMEAMEEEIRSLQKNDTWKLAKLPKGKKAIGCKWVYMKKD 112
Score = 31.2 bits (69), Expect(2) = 9e-12
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 288 KEGSLNVSVRVKARLVVKGYAQMEGI 365
K+GS +R K + V KGYAQ+EGI
Sbjct: 111 KDGSSIGDIRYKDKFVAKGYAQLEGI 136
>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
Length = 324
Score = 59.3 bits (142), Expect(2) = 5e-11
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +1
Query: 172 DRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKD 297
D+W M EEM S+++N TWKLA L KGKK IGCK +FAKK+
Sbjct: 123 DKWRIAMNEEMQSLYQNHTWKLANLPKGKKAIGCKWVFAKKE 164
Score = 35.4 bits (80), Expect(2) = 5e-11
Identities = 20/27 (74%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 288 KEGSLN-VSVRVKARLVVKGYAQMEGI 365
KEG N V VR KARLV KGYAQ EGI
Sbjct: 163 KEGFPNQVDVRYKARLVAKGYAQKEGI 189
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 61.6 bits (148), Expect(2) = 1e-10
Identities = 29/51 (56%), Positives = 34/51 (66%)
Frame = +1
Query: 172 DRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKDPLM*VSESR 324
D+W M EEM S+ +N TWKLA L KGKK IGCK ++AKKD SE R
Sbjct: 592 DKWRSAMSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVR 642
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 312 VRVKARLVVKGYAQMEGI 365
VR KARLV KGYAQ EGI
Sbjct: 641 VRYKARLVAKGYAQKEGI 658
>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
Length = 1034
Score = 57.0 bits (136), Expect(2) = 3e-09
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +1
Query: 175 RWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKD 297
+W M EEM S+HKN TW+L L KGKK IGCK ++AKK+
Sbjct: 563 KWKQAMNEEMQSLHKNRTWELVTLPKGKKAIGCKWVYAKKE 603
Score = 32.0 bits (71), Expect(2) = 3e-09
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 312 VRVKARLVVKGYAQMEGI 365
VR KARLV KGYAQ EGI
Sbjct: 611 VRYKARLVAKGYAQKEGI 628
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 59.7 bits (143), Expect = 9e-08
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +1
Query: 178 WMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKD 297
W MEEEM S+ KN TWKLA+L KGKK IGCK +FAKK+
Sbjct: 805 WAGAMEEEMQSLKKNKTWKLAQLPKGKKAIGCKWVFAKKE 844
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +1
Query: 175 RWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKDPLM*VSESR 324
+W+ M EE+ S+HKN+TW L KL KGK+ + CK ++ KKD + V + R
Sbjct: 525 KWLVAMNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPR 574
Score = 28.1 bits (61), Expect(2) = 2e-07
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 315 RVKARLVVKGYAQMEGI 365
R KARLVVKG+ Q EGI
Sbjct: 574 RCKARLVVKGFYQKEGI 590
>gb|KYP69994.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 510
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1
Query: 169 ADRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKK 294
AD+W+ M+EEM S+ KN TWKL KL KG+ +GCK +F +K
Sbjct: 6 ADKWILAMKEEMESLQKNQTWKLVKLPKGRHVVGCKWIFKRK 47
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 312 VRVKARLVVKGYAQMEGI 365
+R KARLV KG++Q EG+
Sbjct: 56 LRYKARLVAKGFSQKEGV 73
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 58.2 bits (139), Expect = 3e-07
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +1
Query: 178 WMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKD 297
W MEEEM S+ KN TWKL +L KGKK IGCK +FAKK+
Sbjct: 751 WAGAMEEEMQSLKKNKTWKLTQLPKGKKAIGCKWVFAKKE 790
>gb|KYP62383.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 595
Score = 52.0 bits (123), Expect(2) = 8e-07
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +1
Query: 169 ADRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKK 294
A++W+ M EEM S++KN TWKL +L KG+ +GCK ++ KK
Sbjct: 449 AEKWILAMREEMESLYKNQTWKLVELPKGRHVVGCKWIYKKK 490
Score = 28.5 bits (62), Expect(2) = 8e-07
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 312 VRVKARLVVKGYAQMEGI 365
+R KARLV KG++Q EG+
Sbjct: 499 IRYKARLVAKGFSQKEGV 516
>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 49.3 bits (116), Expect(2) = 1e-06
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 151 SLRLCAADRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKK 294
+LR +WM M EE+ ++H+N TW+L L KG+K IGCK ++ K
Sbjct: 794 ALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIK 841
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 315 RVKARLVVKGYAQMEGI 365
R +ARLVVKGYAQ EGI
Sbjct: 850 RYRARLVVKGYAQKEGI 866
>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 49.3 bits (116), Expect(2) = 1e-06
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 151 SLRLCAADRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKK 294
+LR +WM M EE+ ++H+N TW+L L KG+K IGCK ++ K
Sbjct: 745 ALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIK 792
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 315 RVKARLVVKGYAQMEGI 365
R +ARLVVKGYAQ EGI
Sbjct: 801 RYRARLVVKGYAQKEGI 817
>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 49.3 bits (116), Expect(2) = 1e-06
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 151 SLRLCAADRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKK 294
+LR +WM M EE+ ++H+N TW+L L KG+K IGCK ++ K
Sbjct: 745 ALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIK 792
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 315 RVKARLVVKGYAQMEGI 365
R +ARLVVKGYAQ EGI
Sbjct: 801 RYRARLVVKGYAQKEGI 817
>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 49.3 bits (116), Expect(2) = 1e-06
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +1
Query: 151 SLRLCAADRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKK 294
+LR +WM M EE+ ++H+N TW+L L KG+K IGCK ++ K
Sbjct: 745 ALRSSDVSQWMAAMHEEIEALHRNKTWELVDLPKGRKAIGCKWVYKIK 792
Score = 30.8 bits (68), Expect(2) = 1e-06
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 315 RVKARLVVKGYAQMEGI 365
R +ARLVVKGYAQ EGI
Sbjct: 801 RYRARLVVKGYAQKEGI 817
>ref|XP_018506066.1| PREDICTED: dirigent protein 2-like [Pyrus x bretschneideri]
Length = 203
Score = 55.5 bits (132), Expect = 1e-06
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +1
Query: 175 RWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKD 297
+W D M++EM S HKN TW+ +L++G K IGCK ++AKKD
Sbjct: 30 KWHDEMDDEMLSFHKNKTWEFVELTRGMKAIGCKWVYAKKD 70
>gb|PHT74695.1| putative ATP-dependent RNA helicase DHX37 [Capsicum annuum]
Length = 1244
Score = 51.6 bits (122), Expect(2) = 1e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 175 RWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKD 297
RWM M+EEM S++KNDTW L +L K KK + CK +F +K+
Sbjct: 57 RWMIAMQEEMESLNKNDTWDLVRLPKYKKIVRCKWLFKRKE 97
Score = 28.1 bits (61), Expect(2) = 1e-06
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 288 KEGSLNVS-VRVKARLVVKGYAQMEGI 365
KEG+ V KARLV KGY+Q+ GI
Sbjct: 96 KEGTSGVEDAMYKARLVAKGYSQVPGI 122
>gb|PHT64729.1| TMV resistance protein N [Capsicum annuum]
Length = 2008
Score = 56.2 bits (134), Expect = 2e-06
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +1
Query: 169 ADRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKDPLM*VSESR 324
++RWM M+EEM S+HK DTW L +L K KK + CK +F KK+ V ++R
Sbjct: 400 SERWMIAMQEEMESLHKTDTWDLVRLPKDKKVVRCKWIFKKKEGTSGVEDAR 451
>gb|KYP33707.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
gb|KYP40579.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 68
Score = 51.6 bits (122), Expect = 3e-06
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +1
Query: 169 ADRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKK 294
A++W+ M+EEM S+ KN TWKL K KG+ +GCK +F +K
Sbjct: 6 AEKWILAMKEEMESLQKNQTWKLVKFPKGRHVVGCKWIFKRK 47
>ref|XP_016466915.1| PREDICTED: uncharacterized protein LOC107789591 [Nicotiana tabacum]
Length = 1969
Score = 55.5 bits (132), Expect = 3e-06
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +1
Query: 175 RWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKKDPLM*VSESRLD 330
RW M EEM S+HKN TW L K KGK+ +GCK ++ KK+ + + ++R D
Sbjct: 222 RWWLAMTEEMESLHKNQTWVLVKRQKGKRTVGCKWVYQKKEGIPEMEDARRD 273
>gb|KFD67433.1| hypothetical protein M514_20469 [Trichuris suis]
Length = 1272
Score = 45.8 bits (107), Expect(2) = 3e-06
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +1
Query: 169 ADRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKK 294
A RW++ M+EEM S+ +++ W + +L KG K I CK +F KK
Sbjct: 787 APRWLEAMKEEMESLREHNVWTMEELPKGVKPIKCKWVFQKK 828
Score = 32.7 bits (73), Expect(2) = 3e-06
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 288 KEGSLNVSVRVKARLVVKGYAQMEGI 365
K +L VR KARLV KGY+Q EG+
Sbjct: 828 KTNALGEVVRYKARLVAKGYSQQEGV 853
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 51.6 bits (122), Expect(2) = 3e-06
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1
Query: 172 DRWMDVMEEEMYSIHKNDTWKLAKLSKGKKDIGCK*MFAKK 294
D+WM M EEM S+ KN TW+L +L GK+ IGCK ++ +K
Sbjct: 742 DKWMGAMMEEMESLQKNQTWELVQLPMGKRTIGCKWVYKRK 782
Score = 26.9 bits (58), Expect(2) = 3e-06
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 315 RVKARLVVKGYAQMEGI 365
+ KARLV KGY+Q +GI
Sbjct: 792 KFKARLVAKGYSQQKGI 808