BLASTX nr result

ID: Ophiopogon26_contig00037466 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00037466
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243749.1| pentatricopeptide repeat-containing protein ...    65   2e-09

>ref|XP_020243749.1| pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like isoform X1 [Asparagus officinalis]
 gb|ONK61492.1| uncharacterized protein A4U43_C08F30470 [Asparagus officinalis]
          Length = 635

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 36/104 (34%), Positives = 51/104 (49%)
 Frame = +2

Query: 92  LRGAIKSTRKHCPHVLISQSCSGPSHIVSKNSKHADGNYRRDQHVIGGYAXXXXXXXXXX 271
           LR   K TR H   VLIS+     SH    +S +A+GNY R Q++  GY           
Sbjct: 4   LRQTAKFTRNHNAKVLISRFSPASSHKPCNSSNYAEGNYARYQNITRGYVFFLYKSSSSS 63

Query: 272 XXXVGRRSLCLLAGEKPGNGEHKGEIADQEPQRSDSSGIDMDNE 403
              +G RSLC   G      EH G   +Q+ + SD++GI++ N+
Sbjct: 64  RPFLGCRSLCFNMGNTTNKSEHNGTFPNQDSRGSDNTGINVVND 107


Top