BLASTX nr result
ID: Ophiopogon26_contig00037225
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00037225
(463 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinen... 84 1e-15
gb|PRQ16575.1| putative RNA-directed DNA polymerase [Rosa chinen... 74 1e-13
gb|PRQ51837.1| putative RNA-directed DNA polymerase [Rosa chinen... 73 4e-13
gb|PRQ55303.1| putative RNA-directed DNA polymerase [Rosa chinen... 73 3e-12
gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinen... 73 6e-12
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 73 6e-12
ref|XP_024164331.1| uncharacterized protein LOC112171364 [Rosa c... 68 9e-12
ref|XP_011468676.1| PREDICTED: uncharacterized protein LOC105352... 68 1e-11
emb|CAD40421.3| OSJNBa0065J03.17 [Oryza sativa Japonica Group] 72 1e-11
gb|PRQ45427.1| putative RNA-directed DNA polymerase [Rosa chinen... 67 4e-11
gb|PRQ50898.1| putative RNA-directed DNA polymerase [Rosa chinen... 69 6e-11
gb|PRQ52014.1| putative RNA-directed DNA polymerase [Rosa chinen... 68 6e-11
gb|PRQ16677.1| putative RNA-directed DNA polymerase [Rosa chinen... 69 1e-10
gb|AAU89218.1| integrase core domain containing protein [Oryza s... 69 2e-10
gb|ABF96803.1| retrotransposon protein, putative, Ty1-copia subc... 69 2e-10
gb|ERM98543.1| hypothetical protein AMTR_s04311p00004950, partia... 67 2e-10
gb|ABA96113.2| retrotransposon protein, putative, Ty1-copia subc... 68 2e-10
dbj|BAH80079.1| putative retrotransposon protein [Oryza sativa I... 68 2e-10
ref|XP_015698253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 68 2e-10
gb|OMO49732.1| Exostosin-like protein [Corchorus capsularis] 68 3e-10
>gb|PRQ59184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 797
Score = 83.6 bits (205), Expect = 1e-15
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HIAPK FF Q QE+Q IEVKQIRS+DN D FTKSL KSTF K+++GIG+ KLSELP
Sbjct: 738 HIAPKFFFNQQQQEHQKIEVKQIRSEDNRADLFTKSLPKSTFQKHVQGIGLRKLSELP 795
>gb|PRQ16575.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 165
Score = 74.3 bits (181), Expect = 1e-13
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HI+PK F+ Q Q IEV QIRS+DN+VD FTKSL KSTF K+++ IG+ KLSELP
Sbjct: 108 HISPKFFYNQQQQALLNIEVNQIRSEDNVVDLFTKSLPKSTFEKHVKSIGLRKLSELP 165
>gb|PRQ51837.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 167
Score = 72.8 bits (177), Expect = 4e-13
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HI+PK F+ Q Q IEV QIRS+DN+ D FTKSL KSTF K+++ IG+ KLSELP
Sbjct: 108 HISPKFFYNQQQQSLLKIEVNQIRSEDNVADLFTKSLPKSTFEKHVKSIGLRKLSELP 165
>gb|PRQ55303.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 309
Score = 72.8 bits (177), Expect = 3e-12
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HI+PK F+ Q Q IEV QIRS+DN+ D FTKSL KSTF K+++ IG+ KLSELP
Sbjct: 250 HISPKFFYNQQQQSLLKIEVNQIRSEDNVADLFTKSLPKSTFEKHVKSIGLRKLSELP 307
>gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 725
Score = 72.8 bits (177), Expect = 6e-12
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HI+PK F+ Q Q IEV QIRS+DN+ D FTKSL KSTF K+++ IG+ KLSELP
Sbjct: 668 HISPKFFYNQQQQALLNIEVNQIRSEDNVADLFTKSLPKSTFEKHVKSIGLRKLSELP 725
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 72.8 bits (177), Expect = 6e-12
Identities = 35/58 (60%), Positives = 43/58 (74%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HI+PK F+ Q Q IEV QIRS+DN+ D FTKSL KSTF K+++ IG+ KLSELP
Sbjct: 1449 HISPKFFYNQQQQSLLKIEVNQIRSEDNVADLFTKSLPKSTFEKHVKSIGLRKLSELP 1506
>ref|XP_024164331.1| uncharacterized protein LOC112171364 [Rosa chinensis]
Length = 122
Score = 68.2 bits (165), Expect = 9e-12
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSEL 293
HIAPK F H+LQ+ Q I VKQIRS +NL D FTKSL K TF K + IG+ +LS+L
Sbjct: 44 HIAPKFFHTHELQKNQEIAVKQIRSDENLADLFTKSLPKCTFQKLVERIGLRRLSKL 100
>ref|XP_011468676.1| PREDICTED: uncharacterized protein LOC105352744 [Fragaria vesca
subsp. vesca]
Length = 122
Score = 67.8 bits (164), Expect = 1e-11
Identities = 39/74 (52%), Positives = 46/74 (62%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELPCV 284
HIAPK F H+LQ+ Q I VKQIRS +NL D FTKSL K TF K + IG+ +LS+L
Sbjct: 44 HIAPKFFHTHELQKNQEIVVKQIRSDENLADLFTKSLPKCTFKKLVEKIGLRQLSKL--- 100
Query: 283 *FLEGLYYTQGEYP 242
L QGE P
Sbjct: 101 --LSKACKDQGETP 112
>emb|CAD40421.3| OSJNBa0065J03.17 [Oryza sativa Japonica Group]
Length = 864
Score = 71.6 bits (174), Expect = 1e-11
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSEL 293
HIAPKLF+PH+LQ++ I + Q +S DNL D FTKSL STF KY+ GIG+ +L L
Sbjct: 797 HIAPKLFYPHELQQHGEINILQTKSCDNLADLFTKSLPYSTFFKYVEGIGMRRLKNL 853
>gb|PRQ45427.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 141
Score = 67.0 bits (162), Expect = 4e-11
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HI+ K F+ Q Q+ I+V Q+RS+DN+ D FTKSLLKSTF K++ IG+ KLSELP
Sbjct: 84 HISHKFFYNKQQQKLLKIKVNQVRSEDNVADLFTKSLLKSTFEKHVARIGLLKLSELP 141
>gb|PRQ50898.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 333
Score = 69.3 bits (168), Expect = 6e-11
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HI+PK F+ Q Q+ I+V Q+RS+DN+ D FTKSL KSTF K++ IG+ KLSELP
Sbjct: 276 HISPKFFYNQQQQKLLKIKVNQVRSEDNVADLFTKSLPKSTFEKHVARIGLRKLSELP 333
>gb|PRQ52014.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 204
Score = 67.8 bits (164), Expect = 6e-11
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HI+PK F+ Q Q+ I+V Q+RS+DN+ D FTKSL KSTF K++ IG+ KLS+LP
Sbjct: 147 HISPKFFYNQQQQKLLKIKVNQVRSEDNVADLFTKSLPKSTFEKHVARIGLRKLSKLP 204
>gb|PRQ16677.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1276
Score = 69.3 bits (168), Expect = 1e-10
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSELP 290
HI+PK F+ Q Q+ I+V Q+RS+DN+ D FTKSL KSTF K++ IG+ KLSELP
Sbjct: 1219 HISPKFFYNQQQQKLLKIKVNQVRSEDNVADLFTKSLPKSTFEKHVARIGLRKLSELP 1276
>gb|AAU89218.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
Length = 1419
Score = 68.6 bits (166), Expect = 2e-10
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSEL 293
HIAPK F+PH+LQE + I + Q RS +NL D FTKSL S+F + +RGIG+ +L EL
Sbjct: 1355 HIAPKFFYPHELQESREINILQTRSCENLADLFTKSLPASSFYRCVRGIGMRRLGEL 1411
>gb|ABF96803.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1469
Score = 68.6 bits (166), Expect = 2e-10
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSEL 293
HIAPK F+PH+LQE + I + Q RS +NL D FTKSL S+F + +RGIG+ +L EL
Sbjct: 1405 HIAPKFFYPHELQESREINILQTRSCENLADLFTKSLPASSFYRCVRGIGMRRLGEL 1461
>gb|ERM98543.1| hypothetical protein AMTR_s04311p00004950, partial [Amborella
trichopoda]
Length = 288
Score = 67.4 bits (163), Expect = 2e-10
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSEL 293
HI+PK FF H LQE I+V+QIRS DNL D FTKSL STF K + IG+ +L +L
Sbjct: 224 HISPKFFFTHNLQENGDIDVQQIRSSDNLADLFTKSLPTSTFEKMVHKIGMRRLKDL 280
>gb|ABA96113.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 676
Score = 68.2 bits (165), Expect = 2e-10
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSEL 293
HIAPKLF+PH+LQ++ I + Q +S DNL D FTKSL STF K + GIG+ +L L
Sbjct: 609 HIAPKLFYPHELQQHGEINILQTKSCDNLADLFTKSLPYSTFFKCVEGIGMRRLKNL 665
>dbj|BAH80079.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1111
Score = 68.2 bits (165), Expect = 2e-10
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSEL 293
HIAPKLF+PH+LQ++ I + Q +S DNL D FTKSL STF K + GIG+ +L L
Sbjct: 1019 HIAPKLFYPHELQQHGDINILQTKSCDNLADLFTKSLPYSTFFKCVEGIGMRRLKNL 1075
>ref|XP_015698253.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC107305356 [Oryza brachyantha]
Length = 366
Score = 67.8 bits (164), Expect = 2e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSEL 293
HI PKLF+PH+LQ++ I+V Q +S DNL D FTKSL STF K I GIG+ +L L
Sbjct: 299 HIGPKLFYPHELQQHGEIKVLQTKSCDNLADLFTKSLPYSTFSKCIEGIGMRRLKSL 355
>gb|OMO49732.1| Exostosin-like protein [Corchorus capsularis]
Length = 1376
Score = 67.8 bits (164), Expect = 3e-10
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = -1
Query: 463 HIAPKLFFPHQLQEYQTIEVKQIRSQDNLVDFFTKSLLKSTF*KYIRGIGVHKLSEL 293
HI+PK F H+LQE + ++VKQIRS DNL D FTKSL STF K + GIG+ +++++
Sbjct: 1318 HISPKFFHTHELQESRQVDVKQIRSSDNLADLFTKSLPMSTFEKLVYGIGMRQVNKM 1374