BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00037165
         (561 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_717160.1| hypothetical protein BrnapMp063 [Brassica napus...   115   5e-30
emb|CDY17100.1| BnaC06g00330D [Brassica napus]                        108   9e-28
ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion)...   116   1e-26
ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion)...   115   3e-26
ref|XP_013442824.1| hypothetical protein MTR_0082s0080 [Medicago...    93   2e-20
gb|PPS09388.1| hypothetical protein GOBAR_AA11257 [Gossypium bar...    79   8e-18
emb|CDY67547.1| BnaAnng24650D, partial [Brassica napus]                72   2e-13
dbj|GAU19200.1| hypothetical protein TSUD_198830 [Trifolium subt...    73   3e-12
ref|XP_016435338.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...    67   4e-10
gb|PNX97910.1| hypothetical protein L195_g021149 [Trifolium prat...    57   2e-07
gb|PHU24088.1| hypothetical protein BC332_09195 [Capsicum chinense]    54   1e-06
ref|XP_013688462.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate...    56   6e-06

>ref|YP_717160.1| hypothetical protein BrnapMp063 [Brassica napus]
 ref|YP_004927459.1| orf116 (mitochondrion) [Brassica oleracea]
 ref|YP_004927573.1| orf116 (mitochondrion) [Brassica carinata]
 ref|YP_004927875.1| orf116 (mitochondrion) [Brassica rapa subsp. oleifera]
 ref|YP_004927778.1| orf116 (mitochondrion) [Brassica juncea]
 ref|YP_009228114.1| hypothetical protein AYB38_gp34 (mitochondrion) [Brassica nigra]
 dbj|BAC98909.1| hypothetical protein (mitochondrion) [Brassica napus]
 gb|AEH43448.1| orf116 (mitochondrion) [Brassica rapa subsp. oleifera]
 gb|AEH43487.1| orf116 (mitochondrion) [Brassica oleracea]
 gb|AEH43588.1| orf116 (mitochondrion) [Brassica carinata]
 gb|AEH43672.1| orf116 (mitochondrion) [Brassica juncea]
 emb|CBX48376.1| unnamed protein product [Brassica napus]
 gb|AEX57680.1| hypothetical protein RasatMp049 (mitochondrion) [Raphanus sativus]
 gb|AGC81678.1| hypothetical protein DCGMS_00180 (mitochondrion) [Raphanus sativus]
 gb|AHY20358.1| hypothetical protein (mitochondrion) (mitochondrion) [Brassica
           juncea var. tumida]
 gb|AIE42596.1| hypothetical protein RadishMT_p066 (mitochondrion) [Raphanus
           sativus]
 gb|AIZ06204.1| hypothetical protein (mitochondrion) [Brassica napus]
 gb|AIZ06279.1| hypothetical protein (mitochondrion) [Brassica napus]
 gb|AJD85466.1| hypothetical protein BniMp044 (mitochondrion) [Brassica nigra]
 gb|AKD00221.1| hypothetical protein (mitochondrion) [Brassica napus]
 gb|AOW69064.1| orf116 (mitochondrion) [Brassica oleracea var. capitata]
          Length = 116

 Score =  115 bits (289), Expect = 5e-30
 Identities = 60/70 (85%), Positives = 62/70 (88%), Gaps = 3/70 (4%)
 Frame = +3

Query: 12  RWTGHVLAVGSMVTKVTSVRQFRLNSSLYVSGPIGRAGAPRSFFLCGTMP---GNASRRR 182
           R TGH+LAVGSMV KVTSVRQFRLNSSLYVSGP+ RAGAPRSFFLCGTMP   GNASRRR
Sbjct: 34  RRTGHMLAVGSMVPKVTSVRQFRLNSSLYVSGPMARAGAPRSFFLCGTMPGREGNASRRR 93

Query: 183 TTTTQLHFLF 212
           TTT QLHF F
Sbjct: 94  TTTRQLHFGF 103


>emb|CDY17100.1| BnaC06g00330D [Brassica napus]
          Length = 81

 Score =  108 bits (271), Expect = 9e-28
 Identities = 56/66 (84%), Positives = 58/66 (87%), Gaps = 3/66 (4%)
 Frame = +3

Query: 24  HVLAVGSMVTKVTSVRQFRLNSSLYVSGPIGRAGAPRSFFLCGTMP---GNASRRRTTTT 194
           H+LAVGSMV KVTSVR FRLNSSLYVSGP+ RAGAPRSFFLCGTMP   GNASRRRTTT 
Sbjct: 3   HMLAVGSMVPKVTSVRHFRLNSSLYVSGPMARAGAPRSFFLCGTMPGREGNASRRRTTTR 62

Query: 195 QLHFLF 212
           QLHF F
Sbjct: 63  QLHFGF 68


>ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
 gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
          Length = 2992

 Score =  116 bits (291), Expect = 1e-26
 Identities = 74/132 (56%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
 Frame = -1

Query: 387  GKPVFLFIDENISIYSGSIRNKLICIRWIILYR--APNGFLGDSSVSYPSVQCTGLISWR 214
            G P+ ++    ISIYSGSIR K ICI W  L+R  +       +   YPSVQCTG     
Sbjct: 896  GSPLSIYSSYKISIYSGSIRKKSICISWS-LHRMLSAQALFWPAQFYYPSVQCTGASHGG 954

Query: 213  EKENV-VVLLLFXXXXXXXXXXXTERKSAEPRPDL*VR*RKARS*A*TGEPKSLS*PYFL 37
            +K+ + VVLLLF           TERKS EPRPDL VR R ARS A TGEPKSLS PYFL
Sbjct: 955  KKQMLLVVLLLFAASTHSPASSHTERKSVEPRPDLLVRLRLARSSARTGEPKSLSLPYFL 1014

Query: 36   QLTRVQSSGNAQ 1
            QLTRV+SSGNAQ
Sbjct: 1015 QLTRVRSSGNAQ 1026


>ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
 gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
          Length = 2992

 Score =  115 bits (287), Expect = 3e-26
 Identities = 73/132 (55%), Positives = 83/132 (62%), Gaps = 3/132 (2%)
 Frame = -1

Query: 387  GKPVFLFIDENISIYSGSIRNKLICIRWII--LYRAPNGFLGDSSVSYPSVQCTGLISWR 214
            G P+ ++    ISIYSGSIR K ICI W +  +Y A       +   YPSVQCTG     
Sbjct: 896  GSPLSIYSSYKISIYSGSIRKKSICISWSLHRMYSA-QALFWPAQFYYPSVQCTGASHGG 954

Query: 213  EKEN-VVVLLLFXXXXXXXXXXXTERKSAEPRPDL*VR*RKARS*A*TGEPKSLS*PYFL 37
            +K+  +VVLLLF           TERKS EPRPDL VR   ARS A TGEPKSLS PYFL
Sbjct: 955  KKQMYLVVLLLFAASTHSPASSHTERKSVEPRPDLYVRYPYARSSASTGEPKSLSLPYFL 1014

Query: 36   QLTRVQSSGNAQ 1
            QLTRV+SSGNAQ
Sbjct: 1015 QLTRVRSSGNAQ 1026


>ref|XP_013442824.1| hypothetical protein MTR_0082s0080 [Medicago truncatula]
 gb|KEH16849.1| hypothetical protein MTR_0082s0080 [Medicago truncatula]
          Length = 185

 Score = 93.2 bits (230), Expect = 2e-20
 Identities = 59/105 (56%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
 Frame = -3

Query: 301 YIVQSTQWLFRG*LS--LLSIGPMYWAHLMEGKRKCSCXXXXXRLDAFPG---IVPHRKK 137
           Y+++ST ++ R   S  LLSIGPM+  H    K+K SC     RLDAFP    IVPHRKK
Sbjct: 2   YLMESTSYVERPSASSVLLSIGPMH-CHGWREKKKYSCVVVVRRLDAFPSLPDIVPHRKK 60

Query: 136 ERGAPARPIGPLT*SEELSLNWRTEVTFVTILPTANTCPVQRERA 2
           +              EELSLNWRTEVTF TILPTANTCPVQRERA
Sbjct: 61  D--------------EELSLNWRTEVTFGTILPTANTCPVQRERA 91


>gb|PPS09388.1| hypothetical protein GOBAR_AA11257 [Gossypium barbadense]
          Length = 164

 Score = 79.0 bits (193), Expect(2) = 8e-18
 Identities = 41/51 (80%), Positives = 42/51 (82%), Gaps = 3/51 (5%)
 Frame = +3

Query: 69  RQFRLNSSLYVSGPIGRAGAPRSFFLCGTMP---GNASRRRTTTTQLHFLF 212
           R  RLNSSLYVSGP GRA A RSFFLCGTMP   GNAS+RRTTTTQLHF F
Sbjct: 101 RGIRLNSSLYVSGPTGRAAALRSFFLCGTMPGREGNASKRRTTTTQLHFGF 151



 Score = 38.9 bits (89), Expect(2) = 8e-18
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 203 FSFSLHEMSPVHWTDG 250
           F FSLHEMSPVHWTDG
Sbjct: 149 FGFSLHEMSPVHWTDG 164


>emb|CDY67547.1| BnaAnng24650D, partial [Brassica napus]
          Length = 60

 Score = 71.6 bits (174), Expect = 2e-13
 Identities = 38/46 (82%), Positives = 39/46 (84%), Gaps = 3/46 (6%)
 Frame = +3

Query: 54  KVTSVRQFRLNSSLYVSGPIGRAGAPRSFFLCGTM---PGNASRRR 182
           KVTSVRQFRLNSSLYVSGP+ RA APRSFFLCGTM     NASRRR
Sbjct: 6   KVTSVRQFRLNSSLYVSGPMARARAPRSFFLCGTMSERERNASRRR 51


>dbj|GAU19200.1| hypothetical protein TSUD_198830 [Trifolium subterraneum]
          Length = 236

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 42/68 (61%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
 Frame = +3

Query: 6   RSRWTGHVLAVGSMVTKVTSVRQFRLNSSLYVSGPIGRAGAP--RSFFLCGTMPGNASRR 179
           RSRWTGHVLAVGSMV KVTSVRQFRLNSSLYVSGP  + G       F  G   G    R
Sbjct: 168 RSRWTGHVLAVGSMVPKVTSVRQFRLNSSLYVSGPTLQVGPGLCALSFCVGRCRGEKGMR 227

Query: 180 RTTTTQLH 203
           R    Q H
Sbjct: 228 RGGEQQQH 235


>ref|XP_016435338.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein
           2-like [Nicotiana tabacum]
          Length = 201

 Score = 66.6 bits (161), Expect = 4e-10
 Identities = 30/32 (93%), Positives = 30/32 (93%)
 Frame = +2

Query: 2   CAFPLDWTRVSCRKYGYESDFGSPVQAQLLAL 97
           CAF LDWT VSCRKYGYESDFGSPVQAQLLAL
Sbjct: 16  CAFLLDWTHVSCRKYGYESDFGSPVQAQLLAL 47


>gb|PNX97910.1| hypothetical protein L195_g021149 [Trifolium pratense]
          Length = 111

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 33/52 (63%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
 Frame = -3

Query: 256 LLSIGPMYWAHLMEGKRKCSCXXXXXRLDAFP---GIVPHRKKERGAPARPI 110
           LLSIGPM+  H    K+K SC     RLDAFP   GI+PHRKKER APARPI
Sbjct: 19  LLSIGPMH-CHGWREKQKSSCVVVVRRLDAFPSLPGIIPHRKKERRAPARPI 69


>gb|PHU24088.1| hypothetical protein BC332_09195 [Capsicum chinense]
          Length = 85

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 30/49 (61%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
 Frame = -2

Query: 347 SILDP*EIN*FVFDGLYCTEH-PMAF*GIAQSLIHRSNVLGSSHGGKKK 204
           SILDP E N +V DG+Y     P  F G   SLIHRSN LGSSHGGK K
Sbjct: 5   SILDPSERNRYVSDGVYIVRRAPKRFLGQLSSLIHRSNALGSSHGGKSK 53


>ref|XP_013688462.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
           chloroplastic isoform X1 [Brassica napus]
          Length = 282

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = +3

Query: 18  TGHVLAVGSMVTKVTSVRQFRLNSSLYVSGP-IGRAGAPRSFFLC 149
           TGH+L VG+MV K+TSVRQFRLNS LYVSGP +   G  R F  C
Sbjct: 231 TGHILDVGNMVPKLTSVRQFRLNSMLYVSGPMVPTKGNTRIFTYC 275