BLASTX nr result
ID: Ophiopogon26_contig00036913
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00036913
(535 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) ... 316 e-100
gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophio... 316 3e-97
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio... 316 3e-97
gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beauc... 316 3e-97
gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasyl... 314 2e-96
ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [... 314 2e-96
gb|AEX94813.1| RNA polymerase beta' subunit (chloroplast) [Scado... 310 4e-95
ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [... 310 5e-95
gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscu... 310 5e-95
ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [... 309 1e-94
ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [N... 309 1e-94
gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) ... 299 2e-94
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian... 308 3e-94
gb|AEX94811.1| RNA polymerase beta' subunit (chloroplast) [Crinu... 308 4e-94
gb|AEZ49468.1| RNA polymerase beta'' subunit (plastid) [Agapanth... 307 6e-94
gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucha... 306 7e-94
ref|YP_009431294.1| RNA polymerase beta' subunit (chloroplast) [... 306 9e-94
gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amary... 306 1e-93
ref|YP_009180098.1| RNA polymerase beta' subunit (chloroplast) [... 306 2e-93
ref|YP_009432631.1| RNA polymerase beta' subunit (chloroplast) [... 306 2e-93
>gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) [Beaucarnea
recurvata]
Length = 830
Score = 316 bits (810), Expect = e-100
Identities = 162/178 (91%), Positives = 162/178 (91%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 156 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 215
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 216 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTG 275
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 276 KKNSKESKTKSKNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 333
>gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophiopogon japonicus]
Length = 1381
Score = 316 bits (810), Expect = 3e-97
Identities = 162/178 (91%), Positives = 162/178 (91%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 627 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 686
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 687 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 746
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 747 KKNPKESKTKSKNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 804
>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
Length = 1385
Score = 316 bits (810), Expect = 3e-97
Identities = 162/178 (91%), Positives = 162/178 (91%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 631 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 690
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 691 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 750
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 751 KKNSKESKTKSKNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 808
>gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beaucarnea hookeri]
Length = 1385
Score = 316 bits (810), Expect = 3e-97
Identities = 162/178 (91%), Positives = 162/178 (91%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 631 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 690
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 691 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 750
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 751 KKNSKESKTKSKNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 808
>gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasylirion wheeleri]
Length = 1385
Score = 314 bits (805), Expect = 2e-96
Identities = 161/178 (90%), Positives = 162/178 (91%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKE+LIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 631 KYGTAEVDSIVKKENLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 690
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 691 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 750
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 751 KKNSKESKTKSKNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 808
>ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
gb|ATB18548.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
Length = 1381
Score = 314 bits (804), Expect = 2e-96
Identities = 161/178 (90%), Positives = 161/178 (90%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKEDLIEYRGAKE SPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 627 KYGTAEVDSIVKKEDLIEYRGAKELSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 686
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 687 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 746
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 747 KKNSKESKTKSKNWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 804
>gb|AEX94813.1| RNA polymerase beta' subunit (chloroplast) [Scadoxus cinnabarinus]
Length = 1373
Score = 310 bits (795), Expect = 4e-95
Identities = 159/178 (89%), Positives = 159/178 (89%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYG EVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 625 KYGIVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 684
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 685 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTK 744
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 745 NKNSKESTKKLKNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 802
>ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
gb|ASW26644.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
Length = 1381
Score = 310 bits (794), Expect = 5e-95
Identities = 160/178 (89%), Positives = 161/178 (90%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAE+DSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 627 KYGTAEMDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 686
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 687 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 746
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 747 KKNSKESKTKSKNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 804
>gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscus aculeatus]
Length = 1387
Score = 310 bits (794), Expect = 5e-95
Identities = 160/178 (89%), Positives = 161/178 (90%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 631 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 690
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKS+ELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 691 GVDTQLALNTNTRSRVGGLVRVERKKKSMELKIFSGDIHFPGETDKISRHSGILIPPGTE 750
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 751 KKNSKESKTKSKNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 808
>ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
ref|YP_009236350.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
gb|ALM87707.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
gb|AMF84063.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
Length = 1382
Score = 309 bits (791), Expect = 1e-94
Identities = 160/178 (89%), Positives = 160/178 (89%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKEDLIEYRGAKE SPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 628 KYGTAEVDSIVKKEDLIEYRGAKELSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 687
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 688 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 747
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 748 KKNSKESKTKSKNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 805
>ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
gb|AEZ49490.1| RNA polymerase beta'' subunit, partial (plastid) [Nolina atopocarpa]
gb|APO12381.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
Length = 1385
Score = 309 bits (791), Expect = 1e-94
Identities = 160/178 (89%), Positives = 160/178 (89%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKEDLIEYRGAKE SPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 631 KYGTAEVDSIVKKEDLIEYRGAKELSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 690
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 691 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 750
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 751 KKNSKESKTKSKNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 808
>gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) [Agave attenuata]
Length = 761
Score = 299 bits (766), Expect = 2e-94
Identities = 156/178 (87%), Positives = 157/178 (88%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGT E DSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 90 KYGTVEADSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 149
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 150 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 209
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
IYVQRITP KKKYFVLVRPVVTYEIADGINL KLFPQDLLQEK+
Sbjct: 210 KTNSKESKKLKNG-IYVQRITPTKKKYFVLVRPVVTYEIADGINLEKLFPQDLLQEKD 266
>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
Length = 1385
Score = 308 bits (789), Expect = 3e-94
Identities = 160/178 (89%), Positives = 160/178 (89%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 631 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 690
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 691 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 750
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLF QDLLQEKE
Sbjct: 751 KKNSKESKKKSKNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFSQDLLQEKE 808
>gb|AEX94811.1| RNA polymerase beta' subunit (chloroplast) [Crinum asiaticum]
Length = 1387
Score = 308 bits (788), Expect = 4e-94
Identities = 157/178 (88%), Positives = 158/178 (88%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYG E DSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 629 KYGIVEADSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 688
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 689 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 748
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+
Sbjct: 749 KKNSKESKKKWKNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKD 806
>gb|AEZ49468.1| RNA polymerase beta'' subunit (plastid) [Agapanthus praecox]
Length = 1370
Score = 307 bits (786), Expect = 6e-94
Identities = 158/178 (88%), Positives = 160/178 (89%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGT EVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 629 KYGTVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 688
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
G+DTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 689 GIDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG-A 747
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+
Sbjct: 748 EKKNYKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKD 805
>gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucharis x grandiflora]
Length = 1343
Score = 306 bits (785), Expect = 7e-94
Identities = 156/178 (87%), Positives = 158/178 (88%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYG EVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFF PEEVHILPGSSSIMVRNNSII
Sbjct: 625 KYGIVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFFPEEVHILPGSSSIMVRNNSII 684
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKIS+HSGILIPPG
Sbjct: 685 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISKHSGILIPPGTE 744
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+
Sbjct: 745 KKNSKESKKKLKNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKD 802
>ref|YP_009431294.1| RNA polymerase beta' subunit (chloroplast) [Agapanthus coddii]
gb|ASW26730.1| RNA polymerase beta' subunit (chloroplast) [Agapanthus coddii]
Length = 1366
Score = 306 bits (785), Expect = 9e-94
Identities = 158/178 (88%), Positives = 160/178 (89%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGT EVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 625 KYGTIEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 684
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
G+DTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 685 GIDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG-A 743
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+
Sbjct: 744 EKKNYKESKKLKNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKD 801
>gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amaryllis belladonna]
Length = 1387
Score = 306 bits (784), Expect = 1e-93
Identities = 156/178 (87%), Positives = 158/178 (88%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYG EVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSS IMVRNNSII
Sbjct: 629 KYGIVEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSPIMVRNNSII 688
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKIS+HSGILIPPG
Sbjct: 689 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISKHSGILIPPGTE 748
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+
Sbjct: 749 KKNSKESKKKLKNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKD 806
>ref|YP_009180098.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum cyrtonema]
gb|ALL96465.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum cyrtonema]
Length = 1359
Score = 306 bits (783), Expect = 2e-93
Identities = 159/178 (89%), Positives = 159/178 (89%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KY TAEVDSIVKKEDLIEYRGAKE SPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 625 KYWTAEVDSIVKKEDLIEYRGAKELSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 684
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 685 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGTE 744
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
IYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE
Sbjct: 745 KKNSKESKTKSKNGIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 802
>ref|YP_009432631.1| RNA polymerase beta' subunit (chloroplast) [Hosta minor]
gb|ATB18912.1| RNA polymerase beta' subunit (chloroplast) [Hosta minor]
Length = 1380
Score = 306 bits (783), Expect = 2e-93
Identities = 158/178 (88%), Positives = 159/178 (89%)
Frame = +1
Query: 1 KYGTAEVDSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 180
KYGT E DSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII
Sbjct: 625 KYGTVEADSIVKKEDLIEYRGAKEFSPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSII 684
Query: 181 GVDTQPALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPGXX 360
GVDTQ ALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG
Sbjct: 685 GVDTQLALNTNTRSRVGGLVRVERKKKSIELKIFSGDIHFPGETDKISRHSGILIPPG-T 743
Query: 361 XXXXXXXXXXXXXWIYVQRITPIKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKE 534
WIYVQRITP KKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEK+
Sbjct: 744 KKKNSKESKKWKNWIYVQRITPTKKKYFVLVRPVVTYEIADGINLAKLFPQDLLQEKD 801