BLASTX nr result

ID: Ophiopogon26_contig00036648 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00036648
         (375 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK70662.1| uncharacterized protein A4U43_C04F210 [Asparagus ...    66   6e-10
ref|XP_020259633.1| zinc finger CCCH domain-containing protein 2...    66   6e-10

>gb|ONK70662.1| uncharacterized protein A4U43_C04F210 [Asparagus officinalis]
          Length = 787

 Score = 65.9 bits (159), Expect = 6e-10
 Identities = 35/66 (53%), Positives = 42/66 (63%)
 Frame = -2

Query: 374 ESLPGNRDHNEKNDAADNGASVTQGLMPKTRSARDAITPLVQMPCSPTLTNWST*KIH*I 195
           + LP N  H+E NDAADN  SVT+GL+PKTRSARD +TPL  MP    L +     +   
Sbjct: 112 QGLPVNEGHDEDNDAADNDTSVTEGLVPKTRSARDVVTPLAHMPYPDQLEHKKNSLLQ-T 170

Query: 194 LKRLVR 177
           LKRL R
Sbjct: 171 LKRLTR 176


>ref|XP_020259633.1| zinc finger CCCH domain-containing protein 24 [Asparagus
           officinalis]
          Length = 891

 Score = 65.9 bits (159), Expect = 6e-10
 Identities = 35/66 (53%), Positives = 42/66 (63%)
 Frame = -2

Query: 374 ESLPGNRDHNEKNDAADNGASVTQGLMPKTRSARDAITPLVQMPCSPTLTNWST*KIH*I 195
           + LP N  H+E NDAADN  SVT+GL+PKTRSARD +TPL  MP    L +     +   
Sbjct: 216 QGLPVNEGHDEDNDAADNDTSVTEGLVPKTRSARDVVTPLAHMPYPDQLEHKKNSLLQ-T 274

Query: 194 LKRLVR 177
           LKRL R
Sbjct: 275 LKRLTR 280


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