BLASTX nr result

ID: Ophiopogon26_contig00036508 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00036508
         (492 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020242197.1| uncharacterized protein LOC109820461 [Aspara...    86   2e-19
gb|OAY79287.1| hypothetical protein ACMD2_00018 [Ananas comosus]       53   3e-06
ref|XP_004956763.1| uncharacterized protein LOC101758854 [Setari...    52   8e-06

>ref|XP_020242197.1| uncharacterized protein LOC109820461 [Asparagus officinalis]
          Length = 67

 Score = 86.3 bits (212), Expect = 2e-19
 Identities = 51/74 (68%), Positives = 57/74 (77%)
 Frame = -1

Query: 420 MESMESRREAPVLPIHSQVMRIKQEDEKMVEEKFKIHMFERRGWFFSDGRARLPQRSRSP 241
           ME+ME R +A + PIHSQV RIK EDEK++EEKFKIH        FSDGRARL QRSRSP
Sbjct: 1   METMEQRIKA-LNPIHSQVRRIKLEDEKIIEEKFKIHRAR-----FSDGRARL-QRSRSP 53

Query: 240 LGLAGRAISVYVGN 199
           LGL GRAIS+ VGN
Sbjct: 54  LGLGGRAISIPVGN 67


>gb|OAY79287.1| hypothetical protein ACMD2_00018 [Ananas comosus]
          Length = 76

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 32/66 (48%), Positives = 39/66 (59%)
 Frame = -1

Query: 408 ESRREAPVLPIHSQVMRIKQEDEKMVEEKFKIHMFERRGWFFSDGRARLPQRSRSPLGLA 229
           E  R+    P+HSQV +IKQEDEK+  +  +  +FE R  F    R    Q SRSPLG  
Sbjct: 13  EEVRKGGCAPVHSQVKKIKQEDEKIKSQTQQPQVFEARPVF----RELTRQLSRSPLGRV 68

Query: 228 GRAISV 211
           GRAISV
Sbjct: 69  GRAISV 74


>ref|XP_004956763.1| uncharacterized protein LOC101758854 [Setaria italica]
          Length = 103

 Score = 52.4 bits (124), Expect = 8e-06
 Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
 Frame = -1

Query: 417 ESMESRREAPVLPIHSQVMRIKQEDEKMVEEKFKIHMFERR--GWFFSDGRARLPQRSRS 244
           ++ E  +EA VL +HSQV RIK+EDE++ E   K+ + E R  G F  D  A    RS S
Sbjct: 31  QAREEEQEAAVLLVHSQVRRIKREDEEIRERLLKLRLLETRPAGGFVCDPVAWRASRSLS 90

Query: 243 PLGLAGRAISV 211
           PL  AG  I V
Sbjct: 91  PLRRAGNGIPV 101


Top