BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00036464
         (926 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio...   601   0.0  
gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beauc...   601   0.0  
gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophio...   600   0.0  
ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [N...   598   0.0  
ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [...   597   0.0  
ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [...   597   0.0  
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian...   594   0.0  
gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasyl...   594   0.0  
ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [...   592   0.0  
gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscu...   592   0.0  
ref|YP_009432547.1| RNA polymerase beta' subunit (chloroplast) [...   586   0.0  
gb|AEX94827.1| RNA polymerase beta' subunit (chloroplast) [Cordy...   586   0.0  
gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sanse...   584   0.0  
gb|AEX94822.1| RNA polymerase beta' subunit (chloroplast) [Phorm...   579   0.0  
gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucha...   578   0.0  
gb|AEX94813.1| RNA polymerase beta' subunit (chloroplast) [Scado...   578   0.0  
gb|AEX94818.1| RNA polymerase beta' subunit (chloroplast) [Aspho...   578   0.0  
gb|AEX94843.1| RNA polymerase beta' subunit (chloroplast) [Xanth...   575   0.0  
gb|AEX94831.1| RNA polymerase beta' subunit (chloroplast) [Erios...   576   0.0  
ref|YP_009432378.1| RNA polymerase beta' subunit (chloroplast) [...   575   0.0  

>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
          Length = 1385

 Score =  601 bits (1549), Expect = 0.0
 Identities = 293/308 (95%), Positives = 294/308 (95%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 514  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 573

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 574  RRNRFLIP 581


>gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beaucarnea hookeri]
          Length = 1385

 Score =  601 bits (1549), Expect = 0.0
 Identities = 293/308 (95%), Positives = 294/308 (95%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 514  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 573

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 574  RRNRFLIP 581


>gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophiopogon japonicus]
          Length = 1381

 Score =  600 bits (1548), Expect = 0.0
 Identities = 293/308 (95%), Positives = 294/308 (95%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 270  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 329

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 330  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 389

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 390  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 449

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSS VSFSLHKDQDQMNVHSFSVDERYS
Sbjct: 450  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSRVSFSLHKDQDQMNVHSFSVDERYS 509

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 510  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 569

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 570  RRNRFLIP 577


>ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
 gb|AEZ49490.1| RNA polymerase beta'' subunit, partial (plastid) [Nolina atopocarpa]
 gb|APO12381.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
          Length = 1385

 Score =  598 bits (1541), Expect = 0.0
 Identities = 292/308 (94%), Positives = 293/308 (95%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRA TSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRARTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 514  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 573

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 574  RRNRFLIP 581


>ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
 gb|ATB18548.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
          Length = 1381

 Score =  597 bits (1540), Expect = 0.0
 Identities = 292/308 (94%), Positives = 293/308 (95%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 270  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 329

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 330  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 389

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 390  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 449

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS
Sbjct: 450  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 509

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLDPSGTRKK REILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 510  SDLSITKDRVRHKLLDPSGTRKKYREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 569

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 570  RRNRFLIP 577


>ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
            verticillatum]
 ref|YP_009236350.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
            sibiricum]
 gb|ALM87707.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
            verticillatum]
 gb|AMF84063.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
            sibiricum]
          Length = 1382

 Score =  597 bits (1540), Expect = 0.0
 Identities = 292/308 (94%), Positives = 293/308 (95%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 270  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 329

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 330  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 389

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 390  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 449

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS
Sbjct: 450  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 509

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLDPSGTRKK REILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 510  SDLSITKDRVRHKLLDPSGTRKKYREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 569

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 570  RRNRFLIP 577


>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
          Length = 1385

 Score =  594 bits (1531), Expect = 0.0
 Identities = 290/308 (94%), Positives = 292/308 (94%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTI+
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTID 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL G PCRSSIVSFSLHKDQDQMNVHSFSVDERYS
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGCPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWN IYP ILQENSDFLAKR
Sbjct: 514  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNLIYPSILQENSDFLAKR 573

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 574  RRNRFLIP 581


>gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasylirion wheeleri]
          Length = 1385

 Score =  594 bits (1531), Expect = 0.0
 Identities = 290/308 (94%), Positives = 293/308 (95%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEH+RAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHIRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTS+LWIL GGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSNLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLD SGTRKKDREILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 514  SDLSITKDRVRHKLLDLSGTRKKDREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 573

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 574  RRNRFLIP 581


>ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
 gb|ASW26644.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
          Length = 1381

 Score =  592 bits (1526), Expect = 0.0
 Identities = 287/308 (93%), Positives = 293/308 (95%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTC+NTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 270  LANRFITFRAQPIYIRTPFTCKNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 329

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTI+
Sbjct: 330  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTID 389

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 390  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 449

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLW+L G PCRSSIVSFSLHKDQDQMNVHSFSVDERYS
Sbjct: 450  STDVYHAPEYTYSNVHLLPKTSHLWVLAGCPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 509

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRV+HKLLDPSGTRKK+REILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 510  SDLSITKDRVKHKLLDPSGTRKKEREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 569

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 570  RRNRFLIP 577


>gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscus aculeatus]
          Length = 1387

 Score =  592 bits (1526), Expect = 0.0
 Identities = 288/308 (93%), Positives = 292/308 (94%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNT WICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTFWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNE+LVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEHLVHPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMNVHSFSVD+RYS
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVDKRYS 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLDPSGTRKKDRE LDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 514  SDLSITKDRVRHKLLDPSGTRKKDRESLDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 573

Query: 901  RRNRFLIP 924
            RRNRF+IP
Sbjct: 574  RRNRFIIP 581


>ref|YP_009432547.1| RNA polymerase beta' subunit (chloroplast) [Cordyline indivisa]
 gb|ATB18829.1| RNA polymerase beta' subunit (chloroplast) [Cordyline indivisa]
          Length = 1384

 Score =  586 bits (1511), Expect = 0.0
 Identities = 286/308 (92%), Positives = 289/308 (93%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPG
Sbjct: 270  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPG 329

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLV+PTRTRHGHPAFLCSIDLYVTIE
Sbjct: 330  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVYPTRTRHGHPAFLCSIDLYVTIE 389

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 390  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 449

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMNVHSFSVDERY 
Sbjct: 450  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYI 509

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSIT DRVRHKLLDPSGT KKDREILDYSRLDRIISN HWNFIYP ILQENSDFLAK 
Sbjct: 510  SDLSITNDRVRHKLLDPSGTGKKDREILDYSRLDRIISNSHWNFIYPSILQENSDFLAKG 569

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 570  RRNRFLIP 577


>gb|AEX94827.1| RNA polymerase beta' subunit (chloroplast) [Cordyline australis]
          Length = 1388

 Score =  586 bits (1511), Expect = 0.0
 Identities = 286/308 (92%), Positives = 289/308 (93%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLV+PTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVYPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMNVHSFSVDERY 
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYI 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSIT DRVRHKLLDPSGT KKDREILDYSRLDRIISN HWNFIYP ILQENSDFLAK 
Sbjct: 514  SDLSITNDRVRHKLLDPSGTGKKDREILDYSRLDRIISNSHWNFIYPSILQENSDFLAKG 573

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 574  RRNRFLIP 581


>gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sansevieria trifasciata]
          Length = 1384

 Score =  584 bits (1506), Expect = 0.0
 Identities = 284/308 (92%), Positives = 289/308 (93%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFIT RAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 274  LANRFITLRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAP+NGKIKFNEYLVHP RTRHGHPAFLCSI+LYV IE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPANGKIKFNEYLVHPIRTRHGHPAFLCSINLYVIIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQ NVHSFSVDERYS
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQTNVHSFSVDERYS 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSITKDRVRHKLLDPSGTRKKDRE LDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 514  SDLSITKDRVRHKLLDPSGTRKKDRESLDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 573

Query: 901  RRNRFLIP 924
            RRN+F+IP
Sbjct: 574  RRNKFIIP 581


>gb|AEX94822.1| RNA polymerase beta' subunit (chloroplast) [Phormium tenax]
 gb|AEZ49491.1| RNA polymerase beta'' subunit, partial (plastid) [Phormium tenax]
          Length = 1386

 Score =  579 bits (1492), Expect = 0.0
 Identities = 284/308 (92%), Positives = 289/308 (93%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLV+PTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVYPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGP RSSIVSFSLHKDQDQMN+HSFSVDERY 
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPRRSSIVSFSLHKDQDQMNIHSFSVDERYI 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSIT DRVRHKLLDPSG  KKDRE+LDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 514  SDLSITNDRVRHKLLDPSG--KKDREMLDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 571

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 572  RRNRFLIP 579


>gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucharis x grandiflora]
          Length = 1343

 Score =  578 bits (1489), Expect = 0.0
 Identities = 285/308 (92%), Positives = 286/308 (92%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG
Sbjct: 270  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 329

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 330  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 389

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 390  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 449

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMN HSF VDERY 
Sbjct: 450  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNAHSFFVDERYI 509

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SD  IT DRVRHKLLDPSG  KKDREILDYSRLDRIISNG+WNFIYP ILQENSDFLAKR
Sbjct: 510  SDRLITNDRVRHKLLDPSG--KKDREILDYSRLDRIISNGYWNFIYPSILQENSDFLAKR 567

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 568  RRNRFLIP 575


>gb|AEX94813.1| RNA polymerase beta' subunit (chloroplast) [Scadoxus cinnabarinus]
          Length = 1373

 Score =  578 bits (1490), Expect = 0.0
 Identities = 283/308 (91%), Positives = 286/308 (92%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFI FRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPG
Sbjct: 270  LANRFIIFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPG 329

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 330  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 389

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 390  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 449

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMN HSFSVDERY 
Sbjct: 450  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNAHSFSVDERYI 509

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SD  IT DRV+HKLLDPSG  KKDREILDYSRLDR+ISNGHWNFIYP ILQENSDFLAKR
Sbjct: 510  SDRLITNDRVKHKLLDPSG--KKDREILDYSRLDRVISNGHWNFIYPSILQENSDFLAKR 567

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 568  RRNRFLIP 575


>gb|AEX94818.1| RNA polymerase beta' subunit (chloroplast) [Asphodeline damascena]
          Length = 1381

 Score =  578 bits (1489), Expect = 0.0
 Identities = 281/308 (91%), Positives = 290/308 (94%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            A+HVRAPSNG+IKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAQHVRAPSNGRIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDI+HS+NIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRDIIHSMNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL GGPCRSSIVSFSLHKDQDQMNVHSFSV+ERY+
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGGPCRSSIVSFSLHKDQDQMNVHSFSVNERYT 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSIT DRVRHKLL PSG  KKD+EILDYSRLD+IISNGHWNFIYP ILQENSDFLAKR
Sbjct: 514  SDLSITNDRVRHKLLGPSG--KKDKEILDYSRLDQIISNGHWNFIYPSILQENSDFLAKR 571

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 572  RRNRFLIP 579


>gb|AEX94843.1| RNA polymerase beta' subunit (chloroplast) [Xanthorrhoea preissii]
          Length = 1368

 Score =  575 bits (1483), Expect = 0.0
 Identities = 283/308 (91%), Positives = 287/308 (93%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SR+ILHSVNIPPKSLILVQNDQYVESEQVIAEIRA TSTFHFKERVRKHIYSESEGEMHW
Sbjct: 394  SRNILHSVNIPPKSLILVQNDQYVESEQVIAEIRARTSTFHFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSN+HLLPKTSHLWIL GGPC+SSIVSFSLHKDQDQMNV SFSV ERY 
Sbjct: 454  STDVYHAPEYTYSNIHLLPKTSHLWILAGGPCKSSIVSFSLHKDQDQMNVRSFSVAERYI 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSIT DRVRHKLLDPSG  KKDREILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 514  SDLSITNDRVRHKLLDPSG--KKDREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 571

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 572  RRNRFLIP 579


>gb|AEX94831.1| RNA polymerase beta' subunit (chloroplast) [Eriospermum cervicorne]
          Length = 1385

 Score =  576 bits (1484), Expect = 0.0
 Identities = 282/308 (91%), Positives = 285/308 (92%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPG
Sbjct: 274  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPG 333

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 334  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 393

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTS F+FKERVRKHIYSESEGEMHW
Sbjct: 394  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSAFYFKERVRKHIYSESEGEMHW 453

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSNVHLLPKTSHLWIL G  CRSSIVSFSLHKDQDQMNVHSFSVDERY 
Sbjct: 454  STDVYHAPEYTYSNVHLLPKTSHLWILAGSSCRSSIVSFSLHKDQDQMNVHSFSVDERYI 513

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            S LSI  DRVRHKLLD SGT KKDREILDYSRLDRIISNGHWNF+YP ILQENSDFLAKR
Sbjct: 514  SALSIANDRVRHKLLDSSGTGKKDREILDYSRLDRIISNGHWNFLYPSILQENSDFLAKR 573

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 574  RRNRFLIP 581


>ref|YP_009432378.1| RNA polymerase beta' subunit (chloroplast) [Xanthorrhoea preissii]
 gb|ATB18633.1| RNA polymerase beta' subunit (chloroplast) [Xanthorrhoea preissii]
          Length = 1378

 Score =  575 bits (1483), Expect = 0.0
 Identities = 283/308 (91%), Positives = 287/308 (93%)
 Frame = +1

Query: 1    LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAIGIIAGQSIGEPG 180
            LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEA+GIIAGQSIGEPG
Sbjct: 270  LANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDLVELGEAVGIIAGQSIGEPG 329

Query: 181  TQLTLRXXXXXXXXXXXXAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 360
            TQLTLR            AEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE
Sbjct: 330  TQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCSIDLYVTIE 389

Query: 361  SRDILHSVNIPPKSLILVQNDQYVESEQVIAEIRAGTSTFHFKERVRKHIYSESEGEMHW 540
            SR+ILHSVNIPPKSLILVQNDQYVESEQVIAEIRA TSTFHFKERVRKHIYSESEGEMHW
Sbjct: 390  SRNILHSVNIPPKSLILVQNDQYVESEQVIAEIRARTSTFHFKERVRKHIYSESEGEMHW 449

Query: 541  STDVYHAPEYTYSNVHLLPKTSHLWILGGGPCRSSIVSFSLHKDQDQMNVHSFSVDERYS 720
            STDVYHAPEYTYSN+HLLPKTSHLWIL GGPC+SSIVSFSLHKDQDQMNV SFSV ERY 
Sbjct: 450  STDVYHAPEYTYSNIHLLPKTSHLWILAGGPCKSSIVSFSLHKDQDQMNVRSFSVAERYI 509

Query: 721  SDLSITKDRVRHKLLDPSGTRKKDREILDYSRLDRIISNGHWNFIYPLILQENSDFLAKR 900
            SDLSIT DRVRHKLLDPSG  KKDREILDYSRLDRIISNGHWNFIYP ILQENSDFLAKR
Sbjct: 510  SDLSITNDRVRHKLLDPSG--KKDREILDYSRLDRIISNGHWNFIYPSILQENSDFLAKR 567

Query: 901  RRNRFLIP 924
            RRNRFLIP
Sbjct: 568  RRNRFLIP 575