BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00036425
         (1490 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   104   9e-33
gb|PNX71218.1| putative retrotransposon Ty1-copia subclass prote...    84   7e-30
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo...    84   1e-29
gb|AJE29370.1| putative gag protein [Coffea canephora]                 92   2e-29
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro...    82   3e-29
gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]     89   6e-28
gb|KHN28812.1| Retrovirus-related Pol polyprotein from transposo...    85   9e-27
gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]       82   3e-26
gb|PNX74474.1| cytochrome p450 [Trifolium pratense]                    92   3e-25
gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposo...    82   6e-25
gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposo...    82   6e-25
gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposo...    79   1e-24
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...    77   1e-23
gb|KYP69992.1| Retrovirus-related Pol polyprotein from transposo...    75   2e-23
ref|XP_024038695.1| LOW QUALITY PROTEIN: DNA (cytosine-5)-methyl...    75   4e-23
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    71   9e-23
gb|KYP63309.1| Retrovirus-related Pol polyprotein from transposo...    77   6e-22
emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]    67   8e-21
gb|ABA94368.2| retrotransposon protein, putative, Ty1-copia subc...    80   1e-20
ref|XP_019106219.1| PREDICTED: uncharacterized protein LOC109135...   100   1e-20

>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  104 bits (259), Expect(2) = 9e-33
 Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
 Frame = +2

Query: 776  TVINKIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVK 955
            + + K ++EKFDGK  F +W VQ+  +L   G+ KAL+GK KK   M + +W+ +D +  
Sbjct: 2    STVTKFDIEKFDGKICFSIWKVQMKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKAL 61

Query: 956  ATIILCLSDEILYNVMNEMIDGR-WCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
            + I LCLS E+L  V NE      W KLESLYM KS +NK  +K++LY++RM E
Sbjct: 62   SAIQLCLSKEVLREVANETTAAALWLKLESLYMTKSLANKLRLKERLYTIRMVE 115



 Score = 66.6 bits (161), Expect(2) = 9e-33
 Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLL-----CYDHLMTTIMY-GKETLKL 1269
            EGTPI  HLN FN I+ DL  +E+KI++E + +LL+      Y H    ++Y   +TL  
Sbjct: 115  EGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYSNNDTLSF 174

Query: 1270 ADVR-QVLQKNELIKMADST*EALGLVVK---EHKGKLKSKRSHKES--GSSGETCFWCK 1431
             DV+  +L K +      S  +  GL V+   + KG   +K+S  +S    S +TC +CK
Sbjct: 175  EDVKSNLLSKEKFDLDIHSEDKGEGLSVRGRTQEKGSTSNKKSRSKSRGRKSNKTCRYCK 234

Query: 1432 KADHFKKNC 1458
            K  H   +C
Sbjct: 235  KFGHDISDC 243


>gb|PNX71218.1| putative retrotransposon Ty1-copia subclass protein [Trifolium
            pratense]
 gb|PNY02521.1| putative retrotransposon Ty1-copia subclass protein [Trifolium
            pratense]
          Length = 257

 Score = 83.6 bits (205), Expect(2) = 7e-30
 Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
 Frame = +2

Query: 788  KIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATII 967
            K EVE+FDG  NF LW  +V  LL  +G+ KAL  +E K   M ++ W  +  +    I 
Sbjct: 8    KFEVERFDGTGNFRLWERRVKDLLAQQGLQKAL--RETKPTDMADDDWLELQEKAAGLIR 65

Query: 968  LCLSDEILYNVMN-----EMIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
            LC+SDE++Y++++     E++D    KLES Y+ K+  N+ F K +LYSL+M+E
Sbjct: 66   LCVSDEVMYHILDLTSPKEVLD----KLESQYISKTRMNRLFTKMRLYSLKMRE 115



 Score = 77.8 bits (190), Expect(2) = 7e-30
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKLA 1272
            EG+ + QH+NTFN I+++L+ L VKI++E   ++LLC     Y HL+ T++YGK+T+ L 
Sbjct: 115  EGSDLQQHVNTFNNIITELVKLGVKIDDEDSAIMLLCSLPSSYKHLVNTLIYGKDTISLN 174

Query: 1273 DV-RQVLQKNELIKMADST*EALGLVVK------EHKGKLKSKRSHKESGSSGETCFWCK 1431
             +   +L  + + +  +   +  GL VK      + KGK  S +  K        C+ CK
Sbjct: 175  VITATLLSHSRMSQNVEVGTQGKGLYVKGSQDHGQIKGKADSGKMSKSKNRKIAECYSCK 234

Query: 1432 KADHFKKNC 1458
            +  H+K++C
Sbjct: 235  QIGHWKRDC 243


>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 337

 Score = 84.3 bits (207), Expect(2) = 1e-29
 Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
 Frame = +2

Query: 788  KIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATII 967
            + +VEKF G+++F L  +++  LLV++G+  AL G  K    + + +  ++  +  +TII
Sbjct: 4    RFDVEKFTGENDFSLRRIKMQALLVHQGLDDALQGASKLPSTLSDKEKKDLLSKAHSTII 63

Query: 968  LCLSDEILYNVMNE-MIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
            L L DE+L  V  E    G W KLESLYM KS +NK ++KK+L+ L+M+E
Sbjct: 64   LSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEE 113



 Score = 76.3 bits (186), Expect(2) = 1e-29
 Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
 Frame = +1

Query: 1105 DEGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKL 1269
            +EG+ I +H++ F + V DL  ++V+I+EE + ++LLC     +++L+ T+++G++TL L
Sbjct: 112  EEGSSIKEHVSLFTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTL 171

Query: 1270 ADVRQVLQKNELIKMADST------*EALGLVVKEHKGKLKSKRSHKESGSSGETCFWCK 1431
             +V+  L   EL K            EAL    +  K   KSK   +    + + C++CK
Sbjct: 172  EEVKATLNSRELKKKITENKGEGGDPEALMARGRLEKRDSKSKNKRRSKYKNEKACYYCK 231

Query: 1432 KADHFKKNC 1458
            K  HF+K C
Sbjct: 232  KEGHFRKEC 240


>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score = 91.7 bits (226), Expect(2) = 2e-29
 Identities = 45/108 (41%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
 Frame = +2

Query: 797  VEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATIILCL 976
            ++ F+G ++F LW  +V  +LV +G+ KALNGK KK   M+++++  +D R  +TI L +
Sbjct: 10   IQPFNGTTSFTLWQRRVKDVLVQQGLAKALNGKNKKPESMNDDEFEELDARCASTIRLYV 69

Query: 977  SDEILYNVMNEMIDGR--WCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
            +D I+ NV++E       W KLE LY+ KS SNK  +K+Q Y+L+M E
Sbjct: 70   ADNIINNVIDEKDSAADLWKKLEKLYLAKSLSNKLHLKRQFYALKMVE 117



 Score = 68.2 bits (165), Expect(2) = 2e-29
 Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLL-----CYDHLMTTIMYGKETLKLA 1272
            EG  ++ H+NTFN I+  L  + V IEEE + LLLL      Y+ ++TT++YGK+TL+  
Sbjct: 117  EGGSLMDHMNTFNGILDQLQKVGVDIEEENKALLLLTPVSDSYESVVTTLLYGKDTLEFE 176

Query: 1273 DVRQVLQKNELIKMA--DST*EALGLVVKEHKGKLKSKRSHKESGS-----SGETCFWCK 1431
            +V+  L  +E  + A  D T EA  +   E+K   +     K  GS      G  CF C 
Sbjct: 177  NVQSSLLDHEKQRKANQDVTQEAALIARGENKRGKQFGGESKAGGSKAKRKGGIQCFGCH 236

Query: 1432 KADHFKKNC 1458
            +  H K+ C
Sbjct: 237  EFGHIKRYC 245


>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score = 81.6 bits (200), Expect(2) = 3e-29
 Identities = 42/110 (38%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
 Frame = +2

Query: 788  KIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATII 967
            K ++EKF G ++F LW +++  LLV+ G+  ALN  E +   +D+ K    D +  + I+
Sbjct: 5    KFDLEKFTGSNDFSLWRIKMKALLVHTGLGGALN-PEPQDDTIDKKKIVETDSKAFSAIL 63

Query: 968  LCLSDEILYNVMNEMID-GRWCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
            LCL DE+L  V  E+     W KLESLY+ +S +N+ ++KK LY++ ++E
Sbjct: 64   LCLGDEVLREVAEEVSALSLWNKLESLYLKRSLANRLYLKKSLYTIHLEE 113



 Score = 77.8 bits (190), Expect(2) = 3e-29
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
 Frame = +1

Query: 1105 DEGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKL 1269
            +EG  + +H++ FN+I+ DL  +++KI +E   +L+L      Y+H + T++YGKETL +
Sbjct: 112  EEGKDLKKHMDEFNKIILDLKNVDIKITDEDCAILMLSSLPRSYEHFVDTMLYGKETLTM 171

Query: 1270 ADVRQVLQKNELIK----MADST*EALGLVVKEHKGKLKSKRSHKESGSSGE----TCFW 1425
            A+V+  L   EL K      +ST E L +  + +K + ++++  K    S       CF 
Sbjct: 172  AEVKSALNSKELHKKNETKMESTGEGLNVRGRTYKRESRNEKGGKHRSQSRTRGKLKCFV 231

Query: 1426 CKKADHFKKNC 1458
            C K  HFKK+C
Sbjct: 232  CHKEGHFKKDC 242


>gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1308

 Score = 88.6 bits (218), Expect(2) = 6e-28
 Identities = 47/111 (42%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
 Frame = +2

Query: 779  VINKIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKA 958
            V  K E+EKFDGK++F LW V++  LLV++GI  AL G+ K    + + +  +I  +  +
Sbjct: 2    VSTKFELEKFDGKNDFGLWRVKMRALLVHQGIVDALAGEAKLPAGLTDKEKKDILEKAHS 61

Query: 959  TIILCLSDEILYNVMNE-MIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRM 1108
             IIL L D +L  V  E    G W KLESLYM KS +N+ ++KK+LY+ ++
Sbjct: 62   AIILSLGDRVLREVSKETSAAGIWAKLESLYMTKSLANRLYLKKRLYTFQL 112



 Score = 66.2 bits (160), Expect(2) = 6e-28
 Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
 Frame = +1

Query: 1111 GTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKLAD 1275
            G  +  H + FN+++ DL  ++V I++E + ++ L      ++H + T+MYG+++L + +
Sbjct: 115  GKSLEDHTDEFNKVILDLENIDVSIDDEDKAIIFLASLPQTFEHFVDTLMYGRDSLSMEE 174

Query: 1276 VRQVLQKNELIKMADST*E-ALGLVV--KEHKGKLKSKRSHKESGSSGETCFWCKKADHF 1446
            V   L   EL K +D+  E   GLVV  +  +   K K + +        C+ C    HF
Sbjct: 175  VLAALNSKELKKRSDAKEEIGEGLVVRGRPEQKSFKGKNTPRSKSKFKRKCYICNSEKHF 234

Query: 1447 KKNC 1458
            K++C
Sbjct: 235  KRDC 238


>gb|KHN28812.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 257

 Score = 84.7 bits (208), Expect(2) = 9e-27
 Identities = 40/110 (36%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
 Frame = +2

Query: 788  KIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATII 967
            K ++EKF G+++F LW +++  +L+  G  +AL G+EK S  +   + + +  + ++ II
Sbjct: 2    KYDIEKFSGENDFGLWRIKMEAILIQHGCAEALKGEEKMSESLSSKEKSEMIAKARSAII 61

Query: 968  LCLSDEILYNVMNE-MIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
            LCL D+ L  V  E  +   W KLESLYM KS +N+  +++ LY+ +M E
Sbjct: 62   LCLGDKALREVARERTVVSMWLKLESLYMTKSLANRLCLRQHLYTFKMIE 111



 Score = 66.2 bits (160), Expect(2) = 9e-27
 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLL-----CYDHLMTTIMYGK-ETLKL 1269
            E     + L  FN+I+ DL  +EVK+EEE + LLLL      ++H    I+YGK + + L
Sbjct: 111  ESRTTTEQLVDFNKIIDDLENIEVKLEEEDKALLLLNSLPKSFEHFKDAILYGKDQDITL 170

Query: 1270 ADVRQVLQKNELIKMADST*EALGLVVKEHKGKLKSKRSHKESGSSGET----------- 1416
             +V+  ++  E+ K  DS  E  G  +   +G+ + K + ++   S  T           
Sbjct: 171  EEVQTSIRTKEMQKQQDSKSEDNGESLNISRGRNEKKGTRRKKSRSRSTDSKNGQKTKFK 230

Query: 1417 CFWCKKADHFKKNC 1458
            CF C K  HFKK+C
Sbjct: 231  CFNCHKTGHFKKDC 244


>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
          Length = 289

 Score = 82.4 bits (202), Expect(2) = 3e-26
 Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = +2

Query: 776  TVINKIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVK 955
            T   K  +EKF+   +F LW           G+ KAL GK KK   M E  WN ++ R  
Sbjct: 3    TTTTKWNIEKFEDNISFSLW---------ESGLKKALFGKSKKPVTMTEEDWNQLEDRAL 53

Query: 956  ATIILCLSDEILYNVMNEMIDG-RWCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
             TI LCL++E++  V+ E      W KLE LY++KS +N+  +K++LY+L M E
Sbjct: 54   TTIQLCLTNEVMQEVLTEKTTADLWSKLEDLYLMKSLTNRLLLKQRLYTLWMSE 107



 Score = 66.6 bits (161), Expect(2) = 3e-26
 Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKLA 1272
            EGTPI  H+  FN +++ L  ++VKI +E + LLLLC     Y H   T++YG++++ + 
Sbjct: 107  EGTPIKSHIGEFNSVITYLSKIDVKINDEDQALLLLCSLLPSYKHFRDTMIYGRDSIGIK 166

Query: 1273 DVRQVLQKNELIK----MADST*EALGLVVKEHKGKLKSKRSHKESGSSGETCFWCKKAD 1440
            D ++ L   E I      ++S  +A GL V+    +     +  +S     TC +CKK +
Sbjct: 167  DAKENLLNTEKINKELTTSESGDKADGLFVRGRSEERDFGGNMYKSKHRNLTCRYCKKKE 226

Query: 1441 H 1443
            H
Sbjct: 227  H 227


>gb|PNX74474.1| cytochrome p450 [Trifolium pratense]
          Length = 224

 Score = 92.4 bits (228), Expect(2) = 3e-25
 Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = +2

Query: 788  KIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATII 967
            K ++EKFDG+ NF LW VQV  +L+  G++KAL G    + KM  +KW  +D R  + I 
Sbjct: 8    KFDIEKFDGRINFDLWKVQVNDVLIQSGLHKALKG---NTSKMXXDKWEELDLRAASAIR 64

Query: 968  LCLSDEILYNVMN-EMIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
            LCL+  +L NV N       W +LE LY  K  SN+  +K+Q ++LRM E
Sbjct: 65   LCLAKNVLANVYNLSSAKELWERLERLYQAKDISNRLLLKEQFHNLRMDE 114



 Score = 53.5 bits (127), Expect(2) = 3e-25
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
 Frame = +1

Query: 1105 DEGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLL-----CYDHLMTTIMYGKETLKL 1269
            DEGT I  HL+T N IVS+L  ++V+I++E ++L L+      Y HL   + YGKE L  
Sbjct: 113  DEGTKISDHLSTLNNIVSELESIKVEIDDEDKELRLIWSLPSSYVHLKPVLKYGKEKLNF 172

Query: 1270 ADV-RQVLQKNELIKMADST 1326
             +V  +++ +   +K  +ST
Sbjct: 173  KEVATKIISEERRMKSDEST 192


>gb|KYP36635.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 364

 Score = 81.6 bits (200), Expect(2) = 6e-25
 Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 11/121 (9%)
 Frame = +2

Query: 785  NKIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVK--- 955
            N I +EKF+GK++F LW +++  LL  + ++  L     K   + E K      +++   
Sbjct: 5    NTIRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELA 64

Query: 956  -------ATIILCLSDEILYNVMNE-MIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMK 1111
                   + I+L LSDE+LY V +E    G WCKLE LYM KS  NK  +K++L+ L MK
Sbjct: 65   EQEEKAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMK 124

Query: 1112 E 1114
            E
Sbjct: 125  E 125



 Score = 63.2 bits (152), Expect(2) = 6e-25
 Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKLA 1272
            EGTP+  HL+  N ++ +L  ++VKIE+E   ++LL      Y+  + ++  GKE + + 
Sbjct: 125  EGTPLKDHLDELNSVLMELRDIDVKIEDEDAAMILLASLPPSYESFVNSLSVGKECITME 184

Query: 1273 DVRQVLQKNEL-IKMADST*EALG--LVVK---EHKGKLKSKRSHKESGSSGETCFWCKK 1434
            +V+  L   E  ++ + ++ E+ G  LVV    ++  K K K   K + +  + C +CK+
Sbjct: 185  EVKSSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKKDKSKRKTNVNPKDICNYCKE 244

Query: 1435 ADHFKKNC 1458
              H+KK+C
Sbjct: 245  PGHWKKDC 252


>gb|KYP37021.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 352

 Score = 81.6 bits (200), Expect(2) = 6e-25
 Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 11/121 (9%)
 Frame = +2

Query: 785  NKIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVK--- 955
            N I +EKF+GK++F LW +++  LL  + ++  L     K   + E K      +++   
Sbjct: 5    NTIRIEKFNGKNSFNLWRIKMRALLKEQRVWAPLATTSVKQEVLSEPKEKASASKIEELA 64

Query: 956  -------ATIILCLSDEILYNVMNE-MIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMK 1111
                   + I+L LSDE+LY V +E    G WCKLE LYM KS  NK  +K++L+ L MK
Sbjct: 65   EQEEKAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMK 124

Query: 1112 E 1114
            E
Sbjct: 125  E 125



 Score = 63.2 bits (152), Expect(2) = 6e-25
 Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKLA 1272
            EGTP+  HL+  N ++ +L  ++VKIE+E   ++LL      Y+  + ++  GKE + + 
Sbjct: 125  EGTPLKDHLDELNSVLMELRDIDVKIEDEDAAMILLAYLPPSYESFVNSLSVGKECITME 184

Query: 1273 DVRQVLQKNEL-IKMADST*EALG--LVVK---EHKGKLKSKRSHKESGSSGETCFWCKK 1434
            +V+  L   E  ++ + ++ E+ G  LVV    ++  K K K   K + +  + C +CK+
Sbjct: 185  EVKSSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKKDKSKRKTNVNPKDICNYCKE 244

Query: 1435 ADHFKKNC 1458
              H+KK+C
Sbjct: 245  PGHWKKDC 252


>gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 262

 Score = 78.6 bits (192), Expect(2) = 1e-24
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +2

Query: 854  LLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATIILCLSDEILYNVMNEMIDGR-WC 1030
            +L   G+ KAL+GK KK   M + +W+ +D +  + I LCLS E+L  V NE      W 
Sbjct: 4    VLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAALWL 63

Query: 1031 KLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
            KLESLYM KS +NK  +K++LY++RM E
Sbjct: 64   KLESLYMTKSLANKLRLKERLYTIRMVE 91



 Score = 65.5 bits (158), Expect(2) = 1e-24
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLL-----CYDHLMTTIMY-GKETLKL 1269
            EGTPI  HLN FN I+ DL  +E+KI++E + +LL+      Y H    ++Y   +TL  
Sbjct: 91   EGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLPSTYKHFKEIMLYSNNDTLSF 150

Query: 1270 ADVR-QVLQKNELIKMADST*EALGLVVK---EHKGKLKSKRSHKES--GSSGETCFWCK 1431
             DV+  +L K +      S  +  GL V+   + KG   +K+S  +S    + +TC +CK
Sbjct: 151  EDVKSNLLSKEKFDLDIHSEDKGEGLSVRGRTQEKGSTSNKKSRSKSRRRKTNKTCRYCK 210

Query: 1432 KADHFKKNC 1458
            K  H   +C
Sbjct: 211  KFGHDISDC 219


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 77.4 bits (189), Expect(2) = 1e-23
 Identities = 40/109 (36%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
 Frame = +2

Query: 791  IEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATIIL 970
            ++++KF G+++F LW +++  LL  +G +  L+ K+K +    E     ++ +  +TI+L
Sbjct: 6    VKIDKFTGRNSFSLWQIKMRALLKQQGFWAPLS-KDKNAVVTPEMAI--LEEKAHSTIML 62

Query: 971  CLSDEILYNVMNE-MIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
            CL+D+++  V +E    G W KLESLYM KS +NK  +K++L+ LRM E
Sbjct: 63   CLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAE 111



 Score = 63.2 bits (152), Expect(2) = 1e-23
 Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLL-----CYDHLMTTIMYGKETLKLA 1272
            EGT + +HL   N ++ +L  ++VKIE+E   L+LL      +++ + + + GK+T+ L 
Sbjct: 111  EGTQLREHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLE 170

Query: 1273 DVRQVLQKNELIKMADST---*EALGLVVKEHKGKLKSKRSHK---ESGSSGETCFWCKK 1434
            +VR  L   EL   A+ T    +  GL     KG+    + +K   +     + C +CK+
Sbjct: 171  EVRSALHSRELRHKANGTSTDIQPSGLFTSSRKGRKNGGKKNKPMSKGAKPDDVCNYCKE 230

Query: 1435 ADHFKKNC 1458
              H+K +C
Sbjct: 231  KGHWKFDC 238


>gb|KYP69992.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 307

 Score = 75.5 bits (184), Expect(2) = 2e-23
 Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 11/121 (9%)
 Frame = +2

Query: 785  NKIEVEKFDGKSNFLLWMVQVATLLVNEGIYKAL--NGKEKKSPKMDENKWNNI------ 940
            N I++EKF+GK++F LW +++  LL  + ++  L     +K+S     NK  +I      
Sbjct: 3    NTIKIEKFNGKNSFNLWRIKMHALLKEQRVWGPLATTSVKKESKTELSNKSTSIKKEDLA 62

Query: 941  --DFRVKATIILCLSDEILYNVMN-EMIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMK 1111
              + +  + I+L LS+E+LY V + E   G W KLE LYM KS  NK  +K++L+ L MK
Sbjct: 63   EQEEKAHSLILLSLSNEVLYEVADQETACGLWLKLEKLYMTKSICNKLLLKRRLFGLHMK 122

Query: 1112 E 1114
            E
Sbjct: 123  E 123



 Score = 63.9 bits (154), Expect(2) = 2e-23
 Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
 Frame = +1

Query: 1108 EGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKLA 1272
            E TP+ +HL+ FN I+ +L  ++VKIE+E   ++LL      Y+  + ++  GK+ + L 
Sbjct: 123  ESTPLKEHLDEFNSILMELRDIDVKIEDEDSAMILLASLPPSYESFVNSLSVGKDFITLE 182

Query: 1273 DVRQVLQKNELIKMADST*E---ALGLVV---------KEHKGKLKSKRSHKESGSSGET 1416
            +V+  L   +L   A ++ E    +GLVV         K+ KGK KSK +H    +  + 
Sbjct: 183  EVKSSLHLRDLRHKASASIEEPNGIGLVVTNLSKNSKKKKDKGKKKSKGNHI---NPKDI 239

Query: 1417 CFWCKKADHFKKN 1455
            C +CK+  H+K +
Sbjct: 240  CNYCKEPGHWKND 252


>ref|XP_024038695.1| LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1-like
            [Citrus clementina]
          Length = 2164

 Score = 75.1 bits (183), Expect(2) = 4e-23
 Identities = 38/118 (32%), Positives = 73/118 (61%), Gaps = 9/118 (7%)
 Frame = +2

Query: 788  KIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNN--------ID 943
            ++++EKF+G ++F LW +++  +L+ +G+  AL+ +E    K ++ + ++        I+
Sbjct: 5    RVDLEKFNGDNDFYLWSLKMRAILIQQGLDSALDDEEDLMAKKEKVEGSSSFGADQRIIN 64

Query: 944  FRVKATIILCLSDEILYNVMNE-MIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMKE 1114
             +  +TIIL LSDE+L  V  E    G W KLE +++ KS + + +MK++LY+  MK+
Sbjct: 65   NKAHSTIILHLSDEVLREVSKERTATGLWAKLEEMFLKKSLAKRLYMKRRLYTFSMKD 122



 Score = 63.5 bits (153), Expect(2) = 4e-23
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
 Frame = +1

Query: 1099 SSDEGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETL 1263
            S  +G  +  H++ FN+++ DL  + + +E+E   L+LL      Y+H + T++YG++ L
Sbjct: 119  SMKDGVAMKDHVDEFNKLILDLENVNIILEDEDRALILLSSLPESYEHFIDTLLYGRQIL 178

Query: 1264 KLADVRQVLQKNELIKMADST*EALGLVVKEHKGKLKSKRSHKESGSSGETCFWCKKADH 1443
             L DV+  L+  +L K ++          K+   K K KR           C++C+K  H
Sbjct: 179  SLKDVKDALESKDLKKRSE----------KDKAEKKKKKRK----------CYFCQKEGH 218

Query: 1444 FKKNC 1458
            + K+C
Sbjct: 219  YIKDC 223


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 70.9 bits (172), Expect(2) = 9e-23
 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 10/126 (7%)
 Frame = +1

Query: 1111 GTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKLAD 1275
            G  I  HL+ FN+I+ DL  +++ I +E + +LLL      Y ++   IMYG+++L   +
Sbjct: 115  GMSIEXHLDHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDE 174

Query: 1276 VRQVLQKNELIKMADST*EA-LGLVVKEHKGKLKSKRSHKESGSSGET----CFWCKKAD 1440
            V+ +L   EL K  +S  E+  GL ++    K + K  + +S S  +T    CF C K  
Sbjct: 175  VQSILHARELQKQEESKEESGEGLNIRGRSEKREKKGKNSKSRSKSKTKKFKCFICHKEG 234

Query: 1441 HFKKNC 1458
            HFKK+C
Sbjct: 235  HFKKDC 240



 Score = 66.6 bits (161), Expect(2) = 9e-23
 Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
 Frame = +2

Query: 788  KIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATII 967
            K +VEKF GK++F L  +++  LLV +G+  AL G++     M E +   +  +  + II
Sbjct: 5    KFDVEKFTGKNDFGLXRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAHSAII 64

Query: 968  LCLSDEILYNVMNEMIDGR-WCKLESLYMIKSFSNKFFMKKQLYSLRM 1108
            L L D +L            W KLESLYM KS +N+   K +LY+ +M
Sbjct: 65   LSLGDTVLREXAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKM 112


>gb|KYP63309.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 240

 Score = 76.6 bits (187), Expect(2) = 6e-22
 Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
 Frame = +1

Query: 1105 DEGTPILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKL 1269
            +E   + +H++ FN+I+ DL  ++VKI++E + ++LL      ++H + T++YGK +L +
Sbjct: 88   EEEKSLKKHVDDFNKIILDLKSIDVKIDDEDQAIILLSSLPKRFEHFVDTMLYGKASLIM 147

Query: 1270 ADVRQVLQKNELIKMADST*E--ALGLVVK---EHKGKLKSKRSHKESGSSGETCFWCKK 1434
            A+V+  L   E+ +  DS  E  A GL  +   E K   + K S  +S    + CF C K
Sbjct: 148  AEVKATLNSKEIQRNGDSKGEQVAEGLFTRGRQEKKDFKQKKSSRSKSKGKNKRCFICDK 207

Query: 1435 ADHFKKNC 1458
              HFKK+C
Sbjct: 208  EGHFKKDC 215



 Score = 58.2 bits (139), Expect(2) = 6e-22
 Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = +2

Query: 854  LLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATIILCLSDEILYNVMNEMIDGR-WC 1030
            LLV++G+  AL+  ++   K++E K   +  +  + I+L L DE+L  V  E      W 
Sbjct: 4    LLVHQGLDAALS--DEAIMKVEERKRTKVLKKAYSAILLSLGDEVLREVAEEKTAMEIWK 61

Query: 1031 KLESLYMIKSFSNKFFMKKQLYSLRMKEHQ 1120
            KLESLY+ +S +N+ ++KK+LY+L+M+E +
Sbjct: 62   KLESLYLKRSLANRLYLKKRLYTLQMEEEK 91


>emb|CAN84102.1| hypothetical protein VITISV_041248 [Vitis vinifera]
          Length = 894

 Score = 67.0 bits (162), Expect(2) = 8e-21
 Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 11/124 (8%)
 Frame = +1

Query: 1120 ILQHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKLADVRQ 1284
            I +HL+ FN+I+ DL  +++ +  E + +LLL      Y ++   IMYG++ L   +V+ 
Sbjct: 118  IEEHLDHFNKIILDLKNIDIAVSNEDKAILLLTSLDASYTNMKEAIMYGRDILTFDEVQS 177

Query: 1285 VLQKNELIKMADST*E-ALGLVVK-EHKGKLKSKRSHKESGSSGET----CFWCKKADHF 1446
            +L   EL K  +S  E   GL ++ + K + K K ++ +S S  +T    CF C K  HF
Sbjct: 178  ILHARELHKQEESKEELGEGLNIRGKSKKREKKKGNNSKSRSKSKTKKFKCFICHKEGHF 237

Query: 1447 KKNC 1458
            KK+C
Sbjct: 238  KKDC 241



 Score = 63.9 bits (154), Expect(2) = 8e-21
 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
 Frame = +2

Query: 788  KIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKATII 967
            K +VEKF GK++F LW +++  LLV +G+  AL G++     M E     +  +    II
Sbjct: 5    KFDVEKFTGKNDFGLWRLKMRALLVQQGLQDALLGEKNLPXTMQEKHKIELLEKAHGAII 64

Query: 968  LCLSDEILYNVMNEMIDGR-WCKLESLYMIKSFSNKFFMKKQLYSLRM 1108
            L L D  L  V       +   KLESLYM KS +N+     +LY+ +M
Sbjct: 65   LSLGDTXLREVAKAKSAAKLLLKLESLYMTKSLANRLHKXIKLYTFKM 112


>gb|ABA94368.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 375

 Score = 80.1 bits (196), Expect(2) = 1e-20
 Identities = 46/107 (42%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
 Frame = +2

Query: 776  TVINKIEVEKFDGKSNFLLWMVQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVK 955
            TV++K EV KFDG  NF+L  +++  LL  +GI KAL  +E    KMD++KW+ +  +  
Sbjct: 4    TVVSKFEVVKFDGTRNFVLSQMRLKDLLAQQGISKAL--EETMPEKMDDDKWDEMKAQAA 61

Query: 956  ATIILCLSDEILYNVMNEMIDGR-WCKLESLYMIKSFSNKFFMKKQL 1093
            ATI L LSD ++Y VM+E      W KL SLYM KS + +  ++K +
Sbjct: 62   ATIRLRLSDFVMYQVMDEKSPKEIWDKLASLYMSKSLTKESNLRKHV 108



 Score = 50.1 bits (118), Expect(2) = 1e-20
 Identities = 33/106 (31%), Positives = 62/106 (58%), Gaps = 13/106 (12%)
 Frame = +1

Query: 1126 QHLNTFNRIVSDLLMLEVKIEEEGEDLLLLC-----YDHLMTTIMYGKETLKLADVRQVL 1290
            +H++ FN+ V DL  L+VK++++ + ++LLC     Y+H++TT+ +GK T+K  ++   L
Sbjct: 106  KHVDVFNQWVVDLSKLDVKLDDKDKAIILLCSLPPSYEHVVTTLTHGKGTVKTEEIISSL 165

Query: 1291 QKNELIKM----ADST*EALGLVVK---EHKGKL-KSKRSHKESGS 1404
               +L +     A    +A  L+VK   +H+ ++ KSK    +S S
Sbjct: 166  LARDLRRSKKNEATEASQAESLLVKAKHDHETRVPKSKEKGHDSNS 211


>ref|XP_019106219.1| PREDICTED: uncharacterized protein LOC109135550 [Beta vulgaris subsp.
            vulgaris]
          Length = 229

 Score =  100 bits (250), Expect = 1e-20
 Identities = 49/115 (42%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
 Frame = +2

Query: 782  INKIEVEKFDGKSNFLLWM-VQVATLLVNEGIYKALNGKEKKSPKMDENKWNNIDFRVKA 958
            + K ++EKFDGK +F +W  +Q+  +L   G+ KAL GK KK   M + +W ++D +  +
Sbjct: 4    VTKFDIEKFDGKISFSIWRTIQMKVVLTQNGLKKALEGKSKKPATMPDEQWEDMDEKAMS 63

Query: 959  TIILCLSDEILYNVMN-EMIDGRWCKLESLYMIKSFSNKFFMKKQLYSLRMKEHQ 1120
             + LCL+ E+L  V++ E   G W KLESLYM KS +NK  +K++LY++RM E Q
Sbjct: 64   AMQLCLAKEVLREVIHEETTTGLWSKLESLYMTKSLANKLRLKERLYTIRMAEAQ 118