BLASTX nr result

ID: Ophiopogon26_contig00036265 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00036265
         (375 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNT31173.1| hypothetical protein POPTR_006G120500v3 [Populus ...    53   3e-06
ref|XP_006381365.1| hypothetical protein POPTR_0006s12210g [Popu...    53   4e-06

>gb|PNT31173.1| hypothetical protein POPTR_006G120500v3 [Populus trichocarpa]
          Length = 141

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = +3

Query: 264 KYGMEQSYFKVLKIPKGWDRLVLSIVSVETGKTIAK 371
           K   + SYFK L++P+GWD+L +SI+SVETGKTIAK
Sbjct: 18  KIDFKFSYFKALQVPRGWDKLSVSIISVETGKTIAK 53


>ref|XP_006381365.1| hypothetical protein POPTR_0006s12210g [Populus trichocarpa]
 gb|PNT31172.1| hypothetical protein POPTR_006G120500v3 [Populus trichocarpa]
          Length = 147

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = +3

Query: 264 KYGMEQSYFKVLKIPKGWDRLVLSIVSVETGKTIAK 371
           K   + SYFK L++P+GWD+L +SI+SVETGKTIAK
Sbjct: 18  KIDFKFSYFKALQVPRGWDKLSVSIISVETGKTIAK 53


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