BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00036243
         (1000 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_105280124.1| hypothetical protein [Escherichia coli] >gi|...   174   3e-48
gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium bar...   184   3e-48
gb|ABG22123.1| polyprotein, partial [Prunus avium]                    164   1e-46
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   166   1e-44
gb|ABG22121.1| polyprotein, partial [Solanum melongena]               164   4e-44
gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposo...   160   3e-42
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   167   3e-42
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   167   3e-42
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo...   160   2e-41
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          154   4e-41
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen...   159   5e-41
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     161   2e-40
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   161   2e-40
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   160   5e-40
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   154   7e-38
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]                        153   2e-37
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   152   2e-37
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  151   8e-37
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     150   2e-36
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo...   149   4e-36

>ref|WP_105280124.1| hypothetical protein [Escherichia coli]
 gb|PPY92730.1| hypothetical protein C5P31_25790 [Escherichia coli]
          Length = 326

 Score =  174 bits (441), Expect = 3e-48
 Identities = 126/308 (40%), Positives = 173/308 (56%), Gaps = 8/308 (2%)
 Frame = +1

Query: 16  LL*KNDMLISSRRTT-VNELKTQLSAEFKMKDLG*AQKILCGNYSRQR--KGACQLDAEN 186
           LL  +DMLI+S+ +  +++LK QL  EF+MKDLG A+KIL     R R  K  C L  + 
Sbjct: 15  LLYVDDMLIASKNSEEIDKLKIQLKKEFEMKDLGEAKKILGMEIIRDRRSKKLC-LSQKE 73

Query: 187 LLTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATA 366
            L               +S  LA +FKLS  + P    E EY +++ YA+ VGSLMYA  
Sbjct: 74  YLKRVLQRFGIDDKTKPVSTPLASHFKLSTTMSPMDEAEREYMSKVPYANVVGSLMYAMV 133

Query: 367 WTRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVD 546
            TRP+I Q + ++SRYMH+ GK+HW AVKWI+  I  TVDVGLV+E++ +       Y D
Sbjct: 134 CTRPDISQAVGVISRYMHNPGKEHWQAVKWILRYIHNTVDVGLVFEQEDNQ--SVVGYCD 191

Query: 547 SNCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTA 726
           S+   D+DK +STT YVFT ++ P++ + TLQSTVAL   +   +Y    E    A    
Sbjct: 192 SDFAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVALSTTE--AEYMAITEAVKEAIWLQ 249

Query: 727 G*FGS*SGHL*GSMRRY-----EYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEK 891
           G      G    S+  +        L  N VYHAR  KHIDV+YH +R  +    I ++K
Sbjct: 250 GLLKE-LGVEQKSITIFCDSQSAIQLAKNQVYHAR-TKHIDVRYHFVREIIEEGGITVKK 307

Query: 892 IHTKDNQV 915
           IHT +NQ+
Sbjct: 308 IHTTENQL 315


>gb|PPD98036.1| hypothetical protein GOBAR_DD04975 [Gossypium barbadense]
          Length = 1034

 Score =  184 bits (466), Expect = 3e-48
 Identities = 132/313 (42%), Positives = 177/313 (56%), Gaps = 8/313 (2%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRK-GACQLDAENL 189
            LL  +DMLI+S+ +  +  LKTQL+ EF+MKDLG A+KIL     R R  G   L  +  
Sbjct: 695  LLYVDDMLIASKSKVEIERLKTQLNLEFEMKDLGEAKKILGMEICRDRAHGRVSLSQKQY 754

Query: 190  LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
            L +        +    +S  LA +FKLS  L P T  E EY  ++ Y++AVGSLMYA   
Sbjct: 755  LKKILQKFGMNEQTKAVSTPLASHFKLSAQLSPSTNTEQEYMLQVPYSNAVGSLMYAMVC 814

Query: 370  TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDS 549
            TRP+I Q +S+VSRYMH+ GK HW AVKWI+  I  T+D+GL++++D         YVDS
Sbjct: 815  TRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYIHKTMDIGLLFKQDTTLGKCVVGYVDS 874

Query: 550  NCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMA----- 714
            +   D+DK +STT YVFTL+  PI+ + TLQSTVAL   +   +Y    E    A     
Sbjct: 875  DYAGDLDKRRSTTGYVFTLAGGPISWKSTLQSTVALSTTE--AEYMAVTEAVKEAIWLQG 932

Query: 715  -SKTAG*FGS*SGHL*GSMRRYEYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEK 891
              KT G           S  +   +L  N VYHAR  KHIDV++H +R  +    I L+K
Sbjct: 933  MVKTLGLVQEHFNVYCDS--QSAIHLAKNQVYHAR-TKHIDVRFHFVREIIDEGKIHLQK 989

Query: 892  IHTKDNQVDMRSR 930
            I T DN  DM ++
Sbjct: 990  IKTADNLADMMTK 1002


>gb|ABG22123.1| polyprotein, partial [Prunus avium]
          Length = 276

 Score =  164 bits (416), Expect(2) = 1e-46
 Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
 Frame = +1

Query: 28  NDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQR-KGACQLDAENLLTEG 201
           +DMLI  + +  +  LKTQLS EF+MKDLG A+KIL     R R KG   L  +  L + 
Sbjct: 3   DDMLIVCKSKVEIERLKTQLSNEFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKV 62

Query: 202 SS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAWTRPN 381
                  +    +S  LA +FKLS  + P T EE  Y  ++ YASAVGSLMYA   TRP+
Sbjct: 63  LQRFGMNENSKPVSTPLAPHFKLSASMSPNTDEESHYMAQIPYASAVGSLMYAMVCTRPD 122

Query: 382 IPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDSNCIV 561
           I Q +S+VSRYMH+ GK HW AVKWI+  I GTVDVGL++++D         YVDS+   
Sbjct: 123 ISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQCVVGYVDSDYAG 182

Query: 562 DMDKCQSTTCYVFTLSQVPIN*RCTLQSTVAL 657
           D+DK +STT +VFT++  P++ R  LQSTVAL
Sbjct: 183 DLDKRRSTTGFVFTIAGGPVSWRSILQSTVAL 214



 Score = 51.6 bits (122), Expect(2) = 1e-46
 Identities = 26/41 (63%), Positives = 28/41 (68%)
 Frame = +2

Query: 671 EYMTMTEAMKEAIWLQRLLDDLEADQDIYRVRCDGMSIICL 793
           EYM +TEA+KEAIWLQ LLDDL   QD   V CD  S I L
Sbjct: 220 EYMAVTEAIKEAIWLQGLLDDLGVQQDHVDVYCDSQSAIYL 260


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  166 bits (421), Expect(2) = 1e-44
 Identities = 104/216 (48%), Positives = 136/216 (62%), Gaps = 2/216 (0%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRK-GACQLDAENL 189
            LL  +DMLI+S+ +  + +LKTQL+ EF+MKDLG A+KIL    SR RK G   L  +  
Sbjct: 775  LLYVDDMLIASKNKEEIEKLKTQLNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQKEY 834

Query: 190  LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
            L               +S  LA +FKLS  L P+   E  Y +++ YASAVGSLMYA   
Sbjct: 835  LKRVLKRFGISDESKPVSTPLASHFKLSANLSPRDAAEKAYMSKVPYASAVGSLMYAMVC 894

Query: 370  TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDS 549
            TRP+I   + +VSRYMH+ GK+HW AVKWI+  I  TVDVGLV++++  G+     Y DS
Sbjct: 895  TRPDISYAVGVVSRYMHNPGKEHWQAVKWILRYILNTVDVGLVFQQEQDGQ-NVVGYCDS 953

Query: 550  NCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVAL 657
            N   D+D  +STT YVFTL++ P+  R TLQSTVAL
Sbjct: 954  NYAGDLDNRRSTTGYVFTLAKAPVCWRSTLQSTVAL 989



 Score = 43.5 bits (101), Expect(2) = 1e-44
 Identities = 21/37 (56%), Positives = 25/37 (67%)
 Frame = +2

Query: 671  EYMTMTEAMKEAIWLQRLLDDLEADQDIYRVRCDGMS 781
            EYM +TEA+KEAIWLQ LL +L   Q   +V CD  S
Sbjct: 995  EYMALTEAVKEAIWLQGLLGELGILQKHVKVHCDSQS 1031


>gb|ABG22121.1| polyprotein, partial [Solanum melongena]
          Length = 361

 Score =  164 bits (415), Expect = 4e-44
 Identities = 103/216 (47%), Positives = 138/216 (63%), Gaps = 2/216 (0%)
 Frame = +1

Query: 16  LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQR-KGACQLDAENL 189
           LL  +DMLI+++ +  ++ LK QLS EF+MKDLG A+KIL    SR R +G   L  +  
Sbjct: 84  LLYVDDMLIAAKSQFEIDRLKAQLSKEFEMKDLGEAKKILGMEISRDRQRGKLCLTQKQY 143

Query: 190 LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
           L +             +S  LA + KLS  L PKT EE EY  ++ YA+AVGSLMYA   
Sbjct: 144 LKKVLQRFGINDDSKPVSTPLAPHLKLSSQLSPKTDEEREYMAKVPYANAVGSLMYAMVC 203

Query: 370 TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDS 549
           TR +I Q +S+VSRYMHD GK HW AVKWI+  I+ TVD+GLV+E+D         Y DS
Sbjct: 204 TRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTVDIGLVFEQDKSLGSCVVGYCDS 263

Query: 550 NCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVAL 657
           +   D+DK +STT Y+FTL++ P++ + TLQ+TVAL
Sbjct: 264 DYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVAL 299


>gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 394

 Score =  160 bits (405), Expect = 3e-42
 Identities = 116/311 (37%), Positives = 172/311 (55%), Gaps = 6/311 (1%)
 Frame = +1

Query: 16  LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRKGACQLDAENLL 192
           LL  +DMLI+SR ++ +++LK QL+ EF+MK+LG A+KIL     R R+      ++   
Sbjct: 69  LLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKY 128

Query: 193 TEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAWT 372
            E             +S  LA +FKLS  L P+T EE E  + + YASAVGSLMYA   T
Sbjct: 129 IERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCT 188

Query: 373 RPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDSN 552
           RP++   +SMVSRYMH+ GKDHW AVKWI   ++GT ++GLV++R+         +VDS+
Sbjct: 189 RPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSD 248

Query: 553 CIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG* 732
              D+D+ +S + Y+FTL    I+ + +LQS  AL   +   +Y    E    A    G 
Sbjct: 249 YGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTE--AEYVSATEGVKEALWIRG- 305

Query: 733 FGS*SGHL*GSMRRY-----EYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEKIH 897
                G     +  +       +L  N  YH +  KHIDV++H IR  +   ++ L+K+H
Sbjct: 306 LVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDK-TKHIDVKHHFIRDIVTIGEVLLQKVH 364

Query: 898 TKDNQVDMRSR 930
           T +N  DM ++
Sbjct: 365 TSENPADMLTK 375


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  167 bits (422), Expect = 3e-42
 Identities = 124/319 (38%), Positives = 182/319 (57%), Gaps = 11/319 (3%)
 Frame = +1

Query: 7    HAYLL*K-NDMLISSRRTT-VNELKTQLSAEFKMKDLG*AQKILCGNYSRQRK-GACQLD 177
            H YLL   +DMLI+S+  + +N+LK+QLS EF+MKDLG A+KIL  +  R RK G  ++ 
Sbjct: 1514 HIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVS 1573

Query: 178  AENLLTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMY 357
             +N + +        K    +S  LA +FKLS  L P++ EE +  + + Y+SAVGS+MY
Sbjct: 1574 QKNYIEKVLQRFGMDKAKT-VSTPLAPHFKLSAELSPQSDEEKQQMSHIPYSSAVGSVMY 1632

Query: 358  ATAWTRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTR 537
            A   TRP+I   +S+VSRYM   GK+HW AVKWI+  ++G+ D+ LVY++      +CT 
Sbjct: 1633 AMVCTRPDISHAVSVVSRYMSCPGKEHWQAVKWILRYLRGSADLCLVYDQS-----DCTS 1687

Query: 538  ----YVDSNCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERS 705
                YVDS+   D+DK +S T YVFT S   I+ +  LQSTVAL   +   +Y    E  
Sbjct: 1688 SVTGYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTE--AEYMALAEAV 1745

Query: 706  NMASKTAG*FGS*SGHL*GSM----RRYEYYLFANWVYHARMMKHIDVQYHLIRANLGNS 873
              A    G   S       ++     +   +L  N ++H R  KHIDV+YH +R ++   
Sbjct: 1746 KEALWMKGLVSSLGLQQDFTVVFCDSQSAIHLTKNQMFHER-TKHIDVRYHFVREHVTQG 1804

Query: 874  DIDLEKIHTKDNQVDMRSR 930
            DI + K+ T+ N  DM ++
Sbjct: 1805 DIVISKVATEKNPADMLTK 1823


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  167 bits (422), Expect = 3e-42
 Identities = 124/319 (38%), Positives = 182/319 (57%), Gaps = 11/319 (3%)
 Frame = +1

Query: 7    HAYLL*K-NDMLISSRRTT-VNELKTQLSAEFKMKDLG*AQKILCGNYSRQRK-GACQLD 177
            H YLL   +DMLI+S+  + +N+LK+QLS EF+MKDLG A+KIL  +  R RK G  ++ 
Sbjct: 1493 HIYLLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVS 1552

Query: 178  AENLLTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMY 357
             +N + +        K    +S  LA +FKLS  L P++ EE +  + + Y+SAVGS+MY
Sbjct: 1553 QKNYIEKVLQRFGMDKAKT-VSTPLAPHFKLSAELSPQSDEEKQQMSHIPYSSAVGSVMY 1611

Query: 358  ATAWTRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTR 537
            A   TRP+I   +S+VSRYM   GK+HW AVKWI+  ++G+ D+ LVY++      +CT 
Sbjct: 1612 AMVCTRPDISHAVSVVSRYMSCPGKEHWQAVKWILRYLRGSADLCLVYDQS-----DCTS 1666

Query: 538  ----YVDSNCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERS 705
                YVDS+   D+DK +S T YVFT S   I+ +  LQSTVAL   +   +Y    E  
Sbjct: 1667 SVTGYVDSDYAGDLDKRRSLTGYVFTYSGGAISWKAVLQSTVALSTTE--AEYMALAEAV 1724

Query: 706  NMASKTAG*FGS*SGHL*GSM----RRYEYYLFANWVYHARMMKHIDVQYHLIRANLGNS 873
              A    G   S       ++     +   +L  N ++H R  KHIDV+YH +R ++   
Sbjct: 1725 KEALWMKGLVSSLGLQQDFTVVFCDSQSAIHLTKNQMFHER-TKHIDVRYHFVREHVTQG 1783

Query: 874  DIDLEKIHTKDNQVDMRSR 930
            DI + K+ T+ N  DM ++
Sbjct: 1784 DIVISKVATEKNPADMLTK 1802


>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 503

 Score =  160 bits (405), Expect = 2e-41
 Identities = 116/311 (37%), Positives = 172/311 (55%), Gaps = 6/311 (1%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRKGACQLDAENLL 192
            LL  +DMLI+SR ++ +++LK QL+ EF+MK+LG A+KIL     R R+      ++   
Sbjct: 178  LLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKY 237

Query: 193  TEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAWT 372
             E             +S  LA +FKLS  L P+T EE E  + + YASAVGSLMYA   T
Sbjct: 238  IERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCT 297

Query: 373  RPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDSN 552
            RP++   +SMVSRYMH+ GKDHW AVKWI   ++GT ++GLV++R+         +VDS+
Sbjct: 298  RPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSD 357

Query: 553  CIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG* 732
               D+D+ +S + Y+FTL    I+ + +LQS  AL   +   +Y    E    A    G 
Sbjct: 358  YGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTE--AEYVSATEGVKEALWIRG- 414

Query: 733  FGS*SGHL*GSMRRY-----EYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEKIH 897
                 G     +  +       +L  N  YH +  KHIDV++H IR  +   ++ L+K+H
Sbjct: 415  LVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDK-TKHIDVKHHFIRDIVTIGEVLLQKVH 473

Query: 898  TKDNQVDMRSR 930
            T +N  DM ++
Sbjct: 474  TSENPADMLTK 484


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  154 bits (390), Expect = 4e-41
 Identities = 99/232 (42%), Positives = 137/232 (59%), Gaps = 5/232 (2%)
 Frame = +1

Query: 250 LALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAWTRPNIPQVMSMVSRYMHDHG 429
           LAL+FKLS    P++ EE +Y   + YAS VGSL+YA   TRP+I Q +SMVSRYMH+ G
Sbjct: 52  LALHFKLSSSSCPRSQEERDYMACVPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPG 111

Query: 430 KDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDSNCIVDMDKCQSTTCYVFTLS 609
           K  W AVKWI+  + GTVDVGL+++++     +C  Y DS+   D+DK +ST+ YVFTL 
Sbjct: 112 KSQWLAVKWILRYLYGTVDVGLLFKKNCGQ--QCVGYCDSDFAGDLDKQRSTSGYVFTLG 169

Query: 610 QVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG*FGS*SGHL*GSM-----RR 774
              ++ R  LQST+AL   +   +Y    E    A    G  G   G +  ++      +
Sbjct: 170 GGSVSWRSILQSTIALSTTE--AEYIAATEAVKEAIWLKGLLGD-LGVIQENIAVFCDNQ 226

Query: 775 YEYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEKIHTKDNQVDMRSR 930
              +L  N  YHAR  KHIDV+YH +R  +   D+ L+KI TKDN  DM ++
Sbjct: 227 SAIFLAKNQTYHAR-TKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTK 277


>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 502

 Score =  159 bits (402), Expect = 5e-41
 Identities = 123/331 (37%), Positives = 180/331 (54%), Gaps = 12/331 (3%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRK-GACQLDAENL 189
            LL  +DMLI+ +  + + ELK +L AEF MKDLG AQ IL     R RK G   L  E  
Sbjct: 178  LLYVDDMLIACKDMSKIEELKKKLGAEFDMKDLGAAQNILGIEIRRDRKAGKIWLSQEKY 237

Query: 190  LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
            +             V +SI LA +++LS    P + +E +    + YASAVG LMYA   
Sbjct: 238  ILRVLERFNMDGAKV-VSIPLAAHYQLSAKQRPSSQKEIDAMKDVPYASAVGCLMYAMIC 296

Query: 370  TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTR-YVD 546
            TRP++ Q +S+VS+YM + GK HW+AVKWI+  ++GT  +G+++ER    +  C   +VD
Sbjct: 297  TRPDLAQALSVVSKYMSNPGKPHWEAVKWILRYLKGTRQLGIMFERKQ--EVACVAGFVD 354

Query: 547  SNCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTA 726
            ++   D+DK +STT YVFT    P++ + TLQ+  AL   +   +Y    E S  A    
Sbjct: 355  ADYAGDLDKRRSTTGYVFTCGGGPVSWKSTLQAVTALSTTE--AEYMALTEASKEAIWLN 412

Query: 727  G*FGS*SGHL*GSMRRYE----YYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEKI 894
            G       H  G + + +     +L  N V+HAR  KHIDV+YH IR  + + +I +EK+
Sbjct: 413  GLASEFGIHQEGVVVKCDSQSAIHLAKNQVFHAR-TKHIDVRYHRIRDWVESGNIIVEKV 471

Query: 895  HTKDNQVDMRSRKWC*ES-----SLVTTRTC 972
            HT DN  D  ++    E      +L++  TC
Sbjct: 472  HTNDNAADCLTKPVAVEKFKHCLNLLSVTTC 502


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  161 bits (408), Expect = 2e-40
 Identities = 123/325 (37%), Positives = 174/325 (53%), Gaps = 6/325 (1%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRK-GACQLDAENL 189
            LL  +DMLI+ R    + +LK +L AEF MKDLG AQKIL     R R  G   L  E  
Sbjct: 978  LLYVDDMLIACRDMLQIQKLKKKLGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEKY 1037

Query: 190  LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
            + +        +  V +SI LA +F+LS    P   +E +    + YASAVG LMYA   
Sbjct: 1038 IMKILERFNMAEAKV-VSIPLAAHFRLSAEQRPSDQKEIDMMKNVPYASAVGCLMYAMIC 1096

Query: 370  TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDS 549
            TRP++ Q MS+VS+YM + GK HW+AVKWI   ++ T  +G+++ER   G+     +VDS
Sbjct: 1097 TRPDLAQAMSVVSKYMSNPGKRHWEAVKWIFKYLKNTRQLGIMFER-RQGEACVAGFVDS 1155

Query: 550  NCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG 729
            +   D+D+ +ST  YVFT    P++ + TLQ+  AL   +   +Y    E S  A    G
Sbjct: 1156 DFAGDLDRRRSTAGYVFTCGGGPVSWKATLQAVTALSTTE--AEYMALTEASKEAIWLNG 1213

Query: 730  *FGS*SGHL*GSMRRYE----YYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEKIH 897
              G    H  G + + +     +L  N V+HAR  KHID +YH IR  +    I +EK+H
Sbjct: 1214 LAGQLGVHQEGVVVKCDSQSAIHLAKNQVFHAR-TKHIDARYHRIRDWVEAGVIIVEKVH 1272

Query: 898  TKDNQVDMRSRKWC*ESSLVTTRTC 972
            T DN  D  ++    E  L++  TC
Sbjct: 1273 TDDNAADFLTKPVSVEKYLLSITTC 1297


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  161 bits (408), Expect = 2e-40
 Identities = 118/310 (38%), Positives = 172/310 (55%), Gaps = 5/310 (1%)
 Frame = +1

Query: 16   LL*KNDMLISSRRTT-VNELKTQLSAEFKMKDLG*AQKILCGNYSRQRKGACQLDAENLL 192
            LL  +DMLI++   T +N LK  LS EF MKDLG A+KIL    SR+  G   L  +  +
Sbjct: 1574 LLYVDDMLIAANNITEINILKKLLSKEFDMKDLGVAKKILGMEISREN-GVVHLSQKRYI 1632

Query: 193  TEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAWT 372
             +             +S  LA +FKLSE+  P++++E E+ +++ YASAVGS+MYA   T
Sbjct: 1633 RKVLERFNMDM-SKPVSTPLASHFKLSELQMPQSMDEVEHMSKVPYASAVGSIMYAMVCT 1691

Query: 373  RPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDSN 552
            RP+I Q +S+VS+YM + GK HW+AVKWI+  ++G  DVGL + +          YVDS+
Sbjct: 1692 RPDIAQSVSVVSKYMANPGKRHWEAVKWILRYLKGAPDVGLTFRKS--EGISILGYVDSD 1749

Query: 553  CIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG* 732
               D+D+ +STT Y+FTL    ++ + TLQS VAL   +   +Y    E    A    G 
Sbjct: 1750 YAGDLDRRRSTTGYIFTLVGSAVSWKSTLQSIVALSTTE--AEYMAATEAVKEAIWLKGL 1807

Query: 733  FGS*SGHL*GSMRRYE----YYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEKIHT 900
                S     S+ + +     +L  N  +H R  KHIDV++H IR  +    I +EK+ T
Sbjct: 1808 VAELSSAQLKSILKCDSQSAIHLIKNQRFHER-TKHIDVRFHFIRDVVEKGAIKVEKVIT 1866

Query: 901  KDNQVDMRSR 930
             DN  DM ++
Sbjct: 1867 DDNAADMLTK 1876


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  160 bits (405), Expect = 5e-40
 Identities = 116/311 (37%), Positives = 172/311 (55%), Gaps = 6/311 (1%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRKGACQLDAENLL 192
            LL  +DMLI+SR ++ +++LK QL+ EF+MK+LG A+KIL     R R+      ++   
Sbjct: 707  LLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKY 766

Query: 193  TEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAWT 372
             E             +S  LA +FKLS  L P+T EE E  + + YASAVGSLMYA   T
Sbjct: 767  IERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCT 826

Query: 373  RPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDSN 552
            RP++   +SMVSRYMH+ GKDHW AVKWI   ++GT ++GLV++R+         +VDS+
Sbjct: 827  RPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGFVDSD 886

Query: 553  CIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG* 732
               D+D+ +S + Y+FTL    I+ + +LQS  AL   +   +Y    E    A    G 
Sbjct: 887  YGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTE--AEYVSATEGVKEALWIRG- 943

Query: 733  FGS*SGHL*GSMRRY-----EYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEKIH 897
                 G     +  +       +L  N  YH +  KHIDV++H IR  +   ++ L+K+H
Sbjct: 944  LVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDK-TKHIDVKHHFIRDIVTIGEVLLQKVH 1002

Query: 898  TKDNQVDMRSR 930
            T +N  DM ++
Sbjct: 1003 TSENPADMLTK 1013


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  154 bits (389), Expect = 7e-38
 Identities = 116/314 (36%), Positives = 165/314 (52%), Gaps = 9/314 (2%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRK-GACQLDAENL 189
            LL  +DMLI+++ +  + +LK  LS+EF MKDLG A+KIL    SR RK G   L   N 
Sbjct: 1012 LLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNY 1071

Query: 190  LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
            + +       Q     +S  +A +FKLS    P T  E EY +R+ Y+SAVGSLMYA   
Sbjct: 1072 IKKVLQRFNMQN-AKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVC 1130

Query: 370  TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDS 549
            +RP++   MS+VSRYM + GK+HW  V+WI   ++GT    L + R   G      YVDS
Sbjct: 1131 SRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLRGTTYSCLKFGRTDKG---LIGYVDS 1187

Query: 550  NCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG 729
            +   D+D+ +S T YVFT+    ++ R TLQS VAL   +   +Y    E         G
Sbjct: 1188 DYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTE--AEYMAICEACKELIWLKG 1245

Query: 730  *FGS*SG-------HL*GSMRRYEYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLE 888
             +   SG       H      +   YL  + ++H R  KHID++YH +R  +    + + 
Sbjct: 1246 LYAELSGVESCISLH---CDSQSAIYLTKDQMFHER-TKHIDIKYHFVRDVIEEGKLKVC 1301

Query: 889  KIHTKDNQVDMRSR 930
            KI T DN  DM ++
Sbjct: 1302 KISTHDNPADMMTK 1315


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
          Length = 1335

 Score =  153 bits (386), Expect = 2e-37
 Identities = 116/314 (36%), Positives = 166/314 (52%), Gaps = 9/314 (2%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRK-GACQLDAENL 189
            LL  +DMLI+++ +  + +LK  LS+EF MKDLG A+KIL    SR RK G   L   N 
Sbjct: 1014 LLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNY 1073

Query: 190  LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
            + +       Q     +S  +A +FKLS    P T  E EY +R+ Y+SAVGSLMYA   
Sbjct: 1074 IKKVLQRFNMQN-AKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVC 1132

Query: 370  TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDS 549
            +RP++   MS+VSRYM + GK+HW A++WI   ++GT    L + R   G      YVDS
Sbjct: 1133 SRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKFGRTDKG---LIGYVDS 1189

Query: 550  NCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG 729
            +   D+D+ +S T YVFT+    ++ R TLQS VAL   +   +Y    E         G
Sbjct: 1190 DYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTE--AEYMAICEACKELIWLKG 1247

Query: 730  *FGS*SG-------HL*GSMRRYEYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLE 888
             +   SG       H      +   YL  + ++H R  KHID++YH +R  +    + + 
Sbjct: 1248 LYAELSGVESCISLH---CDSQSAIYLTKDQMFHER-TKHIDIKYHFVRDVIEEGKLKVC 1303

Query: 889  KIHTKDNQVDMRSR 930
            KI T DN  DM ++
Sbjct: 1304 KICTHDNPADMMTK 1317


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  152 bits (385), Expect = 2e-37
 Identities = 116/314 (36%), Positives = 165/314 (52%), Gaps = 9/314 (2%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRK-GACQLDAENL 189
            LL  +DMLI+++ +  + +LK  LS+EF MKDLG A+KIL    SR RK G   L   N 
Sbjct: 1012 LLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNY 1071

Query: 190  LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
            + +       Q     +S  +A +FKLS    P    E EY +R+ Y+SAVGSLMYA   
Sbjct: 1072 IKKVLQRFNMQN-AKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVC 1130

Query: 370  TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDS 549
            +RP++   MS+VSRYM + GK+HW AV+WI   ++GT    L + R   G      YVDS
Sbjct: 1131 SRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGRTDKG---LIGYVDS 1187

Query: 550  NCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG 729
            +   D+D+ +S T YVFT+    ++ R TLQS VAL   +   +Y    E         G
Sbjct: 1188 DYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTE--AEYMAICEACKELIWLKG 1245

Query: 730  *FGS*SG-------HL*GSMRRYEYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLE 888
             +   SG       H      +   YL  + ++H R  KHID++YH +R  +    + + 
Sbjct: 1246 LYAELSGVESCISLH---CDSQSAIYLTKDQMFHER-TKHIDIKYHFVRDVIEEGKLKVC 1301

Query: 889  KIHTKDNQVDMRSR 930
            KI T DN  DM ++
Sbjct: 1302 KISTHDNPADMMTK 1315


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  151 bits (381), Expect = 8e-37
 Identities = 122/324 (37%), Positives = 167/324 (51%), Gaps = 16/324 (4%)
 Frame = +1

Query: 16   LL*KNDMLI-SSRRTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRKGA-CQLDAENL 189
            LL  +DML+    +  V ELK QL+ EF MKDLG A KIL     R RK     L  +N 
Sbjct: 983  LLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNY 1042

Query: 190  LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
            L +       Q  Y  +S  L +N+KLS  + P +  E    +R+ YASAVGSLMYA   
Sbjct: 1043 LQKVLRRFNMQD-YNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMIC 1101

Query: 370  TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECT--RYV 543
            TRP+I Q +  VSR+M D GK+HW+AVK I+  I+GT    L +     G  E T   YV
Sbjct: 1102 TRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCF-----GGSEFTIRGYV 1156

Query: 544  DSNCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKT 723
            DS+   D+DK +STT YVFTL+   ++    LQ+ VAL   +   +Y    +    A  T
Sbjct: 1157 DSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTE--AEYMAATQACKEAIWT 1214

Query: 724  AG*FGS*SGHL*GSMRRY-----EYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLE 888
                    GH    +  Y       ++  N  +H+R  KHI VQYH +R  +    ++++
Sbjct: 1215 QRLLEE-LGHKQQKITVYCDSPSALHIARNPAFHSR-TKHIGVQYHFVREVVEEGSVNMQ 1272

Query: 889  KIHTKDNQVDMRSRK-------WC 939
            KIHTKDN  D+ ++        WC
Sbjct: 1273 KIHTKDNLADVMTKPINSDKFIWC 1296


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  150 bits (378), Expect = 2e-36
 Identities = 109/311 (35%), Positives = 170/311 (54%), Gaps = 6/311 (1%)
 Frame = +1

Query: 16   LL*KNDMLISSR-RTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRKGACQLDAENLL 192
            LL  +DMLI+++ ++ + +LK QLS+EF+MKDLG A+KIL    +R+R       ++   
Sbjct: 920  LLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCY 979

Query: 193  TEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAWT 372
             E             +S LLA +F+LS  L P++  + EY +R+ Y+SAV SLMYA   +
Sbjct: 980  IEKVLHRFNMHDAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCS 1039

Query: 373  RPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTRYVDSN 552
            RP++   +S+VSRYM + GK+HW AV+WI   ++GT    L + R   G      YVDS+
Sbjct: 1040 RPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSDG---LVGYVDSD 1096

Query: 553  CIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTAG* 732
               D+D+ +S T YVFT+    ++ + +LQ+TVAL   +   +Y    E         G 
Sbjct: 1097 FAGDLDRRRSLTGYVFTVGGCAVSWKASLQATVALSTTE--AEYMAISEACKEVIWLRGL 1154

Query: 733  FGS*SGHL*GSMRRY-----EYYLFANWVYHARMMKHIDVQYHLIRANLGNSDIDLEKIH 897
            +    G +   +  +        L  + ++H R  KHID++YH IR  +   D+ + KI 
Sbjct: 1155 YTELCG-VTSCINIFCDSQSAICLTKDQMFHER-TKHIDLRYHFIRGVIAEGDVKVCKIS 1212

Query: 898  TKDNQVDMRSR 930
            T DN VDM ++
Sbjct: 1213 THDNPVDMMTK 1223


>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  149 bits (376), Expect = 4e-36
 Identities = 120/326 (36%), Positives = 163/326 (50%), Gaps = 18/326 (5%)
 Frame = +1

Query: 16   LL*KNDMLI-SSRRTTVNELKTQLSAEFKMKDLG*AQKILCGNYSRQRKGA-CQLDAENL 189
            LL  +DML+    +  + ELK QL+ EF MKDLG A KIL     R RK     L  +N 
Sbjct: 983  LLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNY 1042

Query: 190  LTEGSS*I*YQK*YVGLSILLALNFKLSEILYPKTIEECEYTTRMSYASAVGSLMYATAW 369
            L +       Q     +S  L +N+KLS  + P    E    +R+ YASAVGSLMYA   
Sbjct: 1043 LLKVLRRFNMQD-CKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMIC 1101

Query: 370  TRPNIPQVMSMVSRYMHDHGKDHWDAVKWIM*CIQGTVDVGLVYERDYHGK*ECTR-YVD 546
            TRP+I Q +  VSR+M D G++HW  VK I+  I+GT DV L +E    G     R YVD
Sbjct: 1102 TRPDIAQAVGAVSRFMADPGREHWSIVKRILRYIKGTSDVALCFE----GSEFVVRGYVD 1157

Query: 547  SNCIVDMDKCQSTTCYVFTLSQVPIN*RCTLQSTVALPAID*VHDYD*GHERSNMASKTA 726
            S+   D+DK +STT YVFTL+   ++    LQ+ VAL         +  +  +  A K A
Sbjct: 1158 SDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTT------EAEYMAATQACKEA 1211

Query: 727  G*FGS*SGHL*GSMRRYEYY--------LFANWVYHARMMKHIDVQYHLIRANLGNSDID 882
                     L     +   Y        +  N  +H+R  KHI VQYH +R  +    +D
Sbjct: 1212 IWIQRLLEELGHKQEKITVYCDSQSALHIARNPAFHSR-TKHIGVQYHFVREVVEEGKVD 1270

Query: 883  LEKIHTKDNQVDMRSR-------KWC 939
            ++KIHTKDN  D+ ++        WC
Sbjct: 1271 MQKIHTKDNIADVMTKPVNTDKFTWC 1296