BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00036177
         (807 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage fact...    68   5e-09
ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage fact...    68   5e-09
ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage fact...    65   5e-08
ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    64   1e-07
ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...    61   7e-07
ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage fact...    58   7e-06
ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage fact...    58   7e-06
ref|XP_010275999.1| PREDICTED: polyadenylation and cleavage fact...    58   1e-05
ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage fact...    58   1e-05

>ref|XP_008808984.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Phoenix dactylifera]
          Length = 977

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 69/239 (28%), Positives = 94/239 (39%), Gaps = 63/239 (26%)
 Frame = +3

Query: 276 SLLSYGHKSSVRCGEYDHEDHELLPPHLGFERVGTSAIAGVNDV-------------LPL 416
           SL  YG KSS++C EY+ +  E+LP   G  R G+   A                  + +
Sbjct: 208 SLQVYGKKSSMQCSEYNIDHPEVLPARPGVARTGSPQTAATCTASMVEVEGPTRQLKIKI 267

Query: 417 PRPSSHPRTGPK------LNSFSETVADR-------PSLCGF----GSEWPSNCNIELTR 545
            RPS  P  GP+      ++ FS   + R       PS  GF    G     N  +E  R
Sbjct: 268 SRPSPPPIIGPRKSISPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTSQNGWLERRR 327

Query: 546 GWPDGEQNTETSWAYNRKNECDKLHARLLKDSYG------------------------SS 653
            + DG Q  + S A+N  N   K  +R L D+YG                        S 
Sbjct: 328 PFDDGAQQIQASMAFNLNNGYAKQRSRELIDAYGNYTGKSFSLEKLPKVPRLDVNSVASE 387

Query: 654 DMPMKESLSSEEEFVWEKMSPTFPRKEYNSTL--FGHNT-------DLPRSNAPYLGND 803
               K   S EEE+VWE MSPT   +   ++L  FG +T        L R +A  L +D
Sbjct: 388 RASRKWKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGPSTGSLSTRAGLTRPDASLLDHD 446


>ref|XP_008808980.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Phoenix dactylifera]
 ref|XP_008808981.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Phoenix dactylifera]
 ref|XP_008808982.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Phoenix dactylifera]
 ref|XP_008808983.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Phoenix dactylifera]
          Length = 1065

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 69/239 (28%), Positives = 94/239 (39%), Gaps = 63/239 (26%)
 Frame = +3

Query: 276  SLLSYGHKSSVRCGEYDHEDHELLPPHLGFERVGTSAIAGVNDV-------------LPL 416
            SL  YG KSS++C EY+ +  E+LP   G  R G+   A                  + +
Sbjct: 296  SLQVYGKKSSMQCSEYNIDHPEVLPARPGVARTGSPQTAATCTASMVEVEGPTRQLKIKI 355

Query: 417  PRPSSHPRTGPK------LNSFSETVADR-------PSLCGF----GSEWPSNCNIELTR 545
             RPS  P  GP+      ++ FS   + R       PS  GF    G     N  +E  R
Sbjct: 356  SRPSPPPIIGPRKSISPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTSQNGWLERRR 415

Query: 546  GWPDGEQNTETSWAYNRKNECDKLHARLLKDSYG------------------------SS 653
             + DG Q  + S A+N  N   K  +R L D+YG                        S 
Sbjct: 416  PFDDGAQQIQASMAFNLNNGYAKQRSRELIDAYGNYTGKSFSLEKLPKVPRLDVNSVASE 475

Query: 654  DMPMKESLSSEEEFVWEKMSPTFPRKEYNSTL--FGHNT-------DLPRSNAPYLGND 803
                K   S EEE+VWE MSPT   +   ++L  FG +T        L R +A  L +D
Sbjct: 476  RASRKWKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGPSTGSLSTRAGLTRPDASLLDHD 534


>ref|XP_010909642.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           [Elaeis guineensis]
          Length = 1053

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 63/217 (29%), Positives = 83/217 (38%), Gaps = 54/217 (24%)
 Frame = +3

Query: 285 SYGHKSSVRCGEYDHEDHELLPPHLGFERVGTSAIAGVNDV-------------LPLPRP 425
           S G KSS++C EY  +  E+LPP  G  R G+   A                  + + R 
Sbjct: 273 SSGQKSSMQCNEYSIDHPEVLPPRPGAARTGSPQTAATCTTSMVEVEGPTRQLKIKISRS 332

Query: 426 SSHPRTGPK------LNSFSETVADR-------PSLCGF--GSEWPSNCNIELTRGWP-- 554
           S  P  GP+      ++ FS   + R       PS  GF  G    +N N  L R WP  
Sbjct: 333 SPPPIIGPRNSISPPIDRFSRDTSPRRMLERVSPSHSGFVYGPGRGTNQNGWLERRWPFD 392

Query: 555 DGEQNTETSWAYNRKNECDKLHARLLKDSYG------------------------SSDMP 662
           D  Q  + S A+N  N   K  +R L D+YG                        S    
Sbjct: 393 DSAQKIQASMAFNLNNGYAKQRSRELIDAYGNYTGKSASLEKLPKVQRVDVNSVASERAA 452

Query: 663 MKESLSSEEEFVWEKMSPTFPRKEYNSTLFGHNTDLP 773
            K   S EEE+VWE MSPT   +   ++L      LP
Sbjct: 453 RKWKNSEEEEYVWEDMSPTLSDRSRRNSLPPFGPSLP 489


>ref|XP_008784554.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4-like [Phoenix dactylifera]
          Length = 1063

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 67/236 (28%), Positives = 98/236 (41%), Gaps = 59/236 (25%)
 Frame = +3

Query: 276 SLLSYGHKSSVRCGEYDHEDHELLPPHLGFERVGT--SAIAGVNDVLPLPRPSSH----- 434
           SL  YG KSS++C +YD ++ E+ P   G  R G+  +A    + ++ +  P+ H     
Sbjct: 291 SLQVYGRKSSMQCNKYDIDNPEVRPSRRGILRAGSPHTAATQASSMVEVEGPTHHSKSKF 350

Query: 435 ------PRTGPK-----------LNSFSETVADRPSLCGFGSEWPSNCNIELTRGWP--D 557
                 P  GP+            N+    V +R S    G+   +N N    R WP  D
Sbjct: 351 SRFSPPPIIGPRKSILPLTDRFSRNTSPRRVLERASPSHSGAGRGTNQNSWFERIWPFDD 410

Query: 558 GEQNTETSWAYNRKNECDKLHARLLKDSYGS--------SDMPMKESL------------ 677
             Q  ++S A+N  N   + H+R L D+YG+          +P  + L            
Sbjct: 411 VTQQVKSSMAFNLNNGYAEKHSRELIDAYGNCSGTSTSLEKLPKVQRLDVNGLASEAANI 470

Query: 678 ----SSEEEFVWEKMSPTF-PRKEYNS-TLFGHNT-------DLPRSNAPYLGNDF 806
               S EEE+VWE MSPT   R   NS    G +T        L R +A  L +DF
Sbjct: 471 KWKNSEEEEYVWEDMSPTLSDRSRRNSQPPLGRSTGSLSIRGGLTRPDASLLEHDF 526


>ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
           homolog 4 [Elaeis guineensis]
          Length = 1070

 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 52/200 (26%)
 Frame = +3

Query: 276 SLLSYGHKSSVRCGEYDHEDHELLPPHLGFERVGT--SAIAGVNDVLPLPRPSSHPRT-- 443
           SL  YG KSS++C EYD +  E+LP   G  R G+  +A      ++ +  P+ H ++  
Sbjct: 291 SLQVYGQKSSLQCNEYDIDHPEVLPSRRGIVRTGSPLTAATRATSIVEVEGPTRHSKSKF 350

Query: 444 ---------------GPKLNSFSETVADR-------PSLCGFGSEWPSNCNIELTRGWP- 554
                           P  + FS   + R       PS    G    +N N    R WP 
Sbjct: 351 SRFSPPPIIGPRKSVSPPTDRFSRRTSPRRVLKRTSPSHSEAGR--GTNQNGRFERSWPC 408

Query: 555 -DGEQNTETSWAYNRKNECDKLHARLLKDSYGS--------SDMPMKESL---------- 677
            D  +  ++S A++  +   K H+R L D+YG+          +P  + L          
Sbjct: 409 DDATEQVKSSMAFSLNSGYAKQHSRDLIDAYGNCRGKSTSLEKLPKVQRLDVNGIASEAA 468

Query: 678 ------SSEEEFVWEKMSPT 719
                 S EEE+VWE MSPT
Sbjct: 469 TRKWKNSEEEEYVWEDMSPT 488


>ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 1000

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 66/239 (27%), Positives = 84/239 (35%), Gaps = 63/239 (26%)
 Frame = +3

Query: 279 LLSYGHKSSVRCGEYDHEDHELLPPHLGFERVGT--------SAIAGVNDVLP------- 413
           L +YG K S +  EYD +  ELLP  L   R G+        S++      +P       
Sbjct: 242 LQAYGQKPSAQYSEYDLDQPELLPQRLAVAREGSPQTAMLRPSSMIDARGSVPYLKNKIS 301

Query: 414 ---------LPRPSSHPRTGPKLNSFSETVADRPSLCGFGSEWP----SNCNIELTRGWP 554
                    L RP S P       +    +  R S   FGS +     S+ N  L R WP
Sbjct: 302 VPLSPRRIGLKRPVSPPIVRSHNGTSPRKIGGRASTSHFGSGFEPGRLSDPNGWLGRSWP 361

Query: 555 DGE--QNTETSWAYNRKNECDKLHARLLKDSYG------------------------SSD 656
             E  Q+ E S  Y   N   K H R L D+YG                        S  
Sbjct: 362 SNEDPQHVEASTLYKLNNGSGKQHPRDLIDAYGNPRGRVSSYEKFSKVQRLDVNGIASEA 421

Query: 657 MPMKESLSSEEEFVWEKMSPT---------FPRKEYNSTLFGHNTDLPRSNAPYLGNDF 806
              K   S EEE+ WE MSPT          PR   ++   G  T   R +   L +DF
Sbjct: 422 AARKWKNSDEEEYDWEDMSPTLSDRSRRNSLPRVGPSAGSLGIRTGFSRPDPAVLESDF 480


>ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Musa acuminata subsp. malaccensis]
 ref|XP_009399216.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 1039

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 66/239 (27%), Positives = 84/239 (35%), Gaps = 63/239 (26%)
 Frame = +3

Query: 279 LLSYGHKSSVRCGEYDHEDHELLPPHLGFERVGT--------SAIAGVNDVLP------- 413
           L +YG K S +  EYD +  ELLP  L   R G+        S++      +P       
Sbjct: 281 LQAYGQKPSAQYSEYDLDQPELLPQRLAVAREGSPQTAMLRPSSMIDARGSVPYLKNKIS 340

Query: 414 ---------LPRPSSHPRTGPKLNSFSETVADRPSLCGFGSEWP----SNCNIELTRGWP 554
                    L RP S P       +    +  R S   FGS +     S+ N  L R WP
Sbjct: 341 VPLSPRRIGLKRPVSPPIVRSHNGTSPRKIGGRASTSHFGSGFEPGRLSDPNGWLGRSWP 400

Query: 555 DGE--QNTETSWAYNRKNECDKLHARLLKDSYG------------------------SSD 656
             E  Q+ E S  Y   N   K H R L D+YG                        S  
Sbjct: 401 SNEDPQHVEASTLYKLNNGSGKQHPRDLIDAYGNPRGRVSSYEKFSKVQRLDVNGIASEA 460

Query: 657 MPMKESLSSEEEFVWEKMSPT---------FPRKEYNSTLFGHNTDLPRSNAPYLGNDF 806
              K   S EEE+ WE MSPT          PR   ++   G  T   R +   L +DF
Sbjct: 461 AARKWKNSDEEEYDWEDMSPTLSDRSRRNSLPRVGPSAGSLGIRTGFSRPDPAVLESDF 519


>ref|XP_010275999.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
           [Nelumbo nucifera]
          Length = 895

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 68/249 (27%), Positives = 94/249 (37%), Gaps = 63/249 (25%)
 Frame = +3

Query: 249 DAQQTRLPPSLLS-YGHKSSVRCGEYDHEDHELLPPHLGFE-------RVGTSAIAGVND 404
           D QQ R   S L  YG K +    E+D +  E + PH G +        +  S++     
Sbjct: 75  DIQQGRGSSSSLQIYGRKPASGYVEFDLDHDEGISPHFGVQGLDSQGAAIRASSVGAAER 134

Query: 405 VLP----LPRPSSHPRTGPK----------LNSFSETVADRPSLCGFGSEWPSNCNIELT 542
           +LP    L R SS  R G +          +N+    V +  S    GSE+      + T
Sbjct: 135 LLPTKARLARSSSPARIGARSLPPTNDGFAINNSPRRVVEGASPSHSGSEYGPG---KAT 191

Query: 543 RGWPDGE--------QNTETSWAYNRKNECDKLHARLLKDSYG----------------- 647
            G  DGE        Q  ETS  YN  N CD+   R L D+YG                 
Sbjct: 192 DG--DGEKSEWWFKCQQMETSGTYNPSNGCDQQRPRALIDAYGNYRGKNTLNGKPLKVER 249

Query: 648 -------SSDMPMKESLSSEEEFVWEKMSPTFPRKEYNSTLFGHN---------TDLPRS 779
                  S ++  +   + EEE+VWE MSPT   +   + L   N         T L R 
Sbjct: 250 LDINGINSKEVSKRWQNTEEEEYVWEDMSPTLTDRSRGNDLMPFNPPLGSLSRRTGLERP 309

Query: 780 NAPYLGNDF 806
           +   L +DF
Sbjct: 310 STAILESDF 318


>ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
           [Nelumbo nucifera]
          Length = 1071

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 68/249 (27%), Positives = 94/249 (37%), Gaps = 63/249 (25%)
 Frame = +3

Query: 249 DAQQTRLPPSLLS-YGHKSSVRCGEYDHEDHELLPPHLGFE-------RVGTSAIAGVND 404
           D QQ R   S L  YG K +    E+D +  E + PH G +        +  S++     
Sbjct: 251 DIQQGRGSSSSLQIYGRKPASGYVEFDLDHDEGISPHFGVQGLDSQGAAIRASSVGAAER 310

Query: 405 VLP----LPRPSSHPRTGPK----------LNSFSETVADRPSLCGFGSEWPSNCNIELT 542
           +LP    L R SS  R G +          +N+    V +  S    GSE+      + T
Sbjct: 311 LLPTKARLARSSSPARIGARSLPPTNDGFAINNSPRRVVEGASPSHSGSEYGPG---KAT 367

Query: 543 RGWPDGE--------QNTETSWAYNRKNECDKLHARLLKDSYG----------------- 647
            G  DGE        Q  ETS  YN  N CD+   R L D+YG                 
Sbjct: 368 DG--DGEKSEWWFKCQQMETSGTYNPSNGCDQQRPRALIDAYGNYRGKNTLNGKPLKVER 425

Query: 648 -------SSDMPMKESLSSEEEFVWEKMSPTFPRKEYNSTLFGHN---------TDLPRS 779
                  S ++  +   + EEE+VWE MSPT   +   + L   N         T L R 
Sbjct: 426 LDINGINSKEVSKRWQNTEEEEYVWEDMSPTLTDRSRGNDLMPFNPPLGSLSRRTGLERP 485

Query: 780 NAPYLGNDF 806
           +   L +DF
Sbjct: 486 STAILESDF 494