BLASTX nr result

ID: Ophiopogon26_contig00036105 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00036105
         (528 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264225.1| 60S ribosomal protein L30 [Asparagus officin...    53   6e-06

>ref|XP_020264225.1| 60S ribosomal protein L30 [Asparagus officinalis]
 ref|XP_020242492.1| 60S ribosomal protein L30 [Asparagus officinalis]
 gb|ONK61672.1| uncharacterized protein A4U43_C08F32380 [Asparagus officinalis]
 gb|ONK69270.1| uncharacterized protein A4U43_C05F21100 [Asparagus officinalis]
          Length = 112

 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = +1

Query: 400 IGFVRRLLRSHCLVISVSIGKLIIIANNCPPLRKSLIEYYAML 528
           +GF + +LRS    +  S GKLIIIANNCPPLRKSLIEYYAML
Sbjct: 29  LGF-KTVLRS----LRSSKGKLIIIANNCPPLRKSLIEYYAML 66


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