BLASTX nr result

ID: Ophiopogon26_contig00035839 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00035839
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020240793.1| probable E3 ubiquitin-protein ligase MARCH10...    97   7e-21
ref|XP_020240787.1| probable E3 ubiquitin-protein ligase MARCH10...    97   7e-21

>ref|XP_020240793.1| probable E3 ubiquitin-protein ligase MARCH10 isoform X2 [Asparagus
           officinalis]
 gb|ONK79633.1| uncharacterized protein A4U43_C01F8360 [Asparagus officinalis]
          Length = 476

 Score = 97.4 bits (241), Expect = 7e-21
 Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
 Frame = -3

Query: 282 MTTQ-YISHEHEANEDRRTSMPNQKDHEVTAEIVE-VSFIHHGKRPRLSVEIPSKDLGDP 109
           MT+Q YI  EHEANED   S+ NQKDHE +AEI+E VS +H+ KRPRLSVEIPSKD G P
Sbjct: 1   MTSQSYIPIEHEANEDHGISVLNQKDHEKSAEIIEEVSPVHNLKRPRLSVEIPSKDSGSP 60

Query: 108 SVRIGMPPTPSPISMKIDLCR 46
           S+ I MP TPS  S  +DLCR
Sbjct: 61  SMTINMPTTPSSDSTNVDLCR 81


>ref|XP_020240787.1| probable E3 ubiquitin-protein ligase MARCH10 isoform X1 [Asparagus
           officinalis]
          Length = 477

 Score = 97.4 bits (241), Expect = 7e-21
 Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
 Frame = -3

Query: 282 MTTQ-YISHEHEANEDRRTSMPNQKDHEVTAEIVE-VSFIHHGKRPRLSVEIPSKDLGDP 109
           MT+Q YI  EHEANED   S+ NQKDHE +AEI+E VS +H+ KRPRLSVEIPSKD G P
Sbjct: 1   MTSQSYIPIEHEANEDHGISVLNQKDHEKSAEIIEEVSPVHNLKRPRLSVEIPSKDSGSP 60

Query: 108 SVRIGMPPTPSPISMKIDLCR 46
           S+ I MP TPS  S  +DLCR
Sbjct: 61  SMTINMPTTPSSDSTNVDLCR 81


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