BLASTX nr result
ID: Ophiopogon26_contig00035829
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00035829
(360 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK76589.1| uncharacterized protein A4U43_C03F29880 [Asparagu... 54 5e-14
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo... 52 1e-10
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 49 3e-10
gb|AKM12484.1| reverse transcriptase, partial [Ixora finlaysoniana] 48 3e-10
gb|AKM12482.1| reverse transcriptase, partial [Ixora coccinea] 48 3e-10
gb|AKM12481.1| reverse transcriptase, partial [Ixora coccinea] 48 3e-10
gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis] 48 6e-10
ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235... 54 6e-10
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen... 48 6e-10
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 49 7e-10
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 49 7e-10
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 50 7e-10
gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposo... 50 7e-10
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo... 50 7e-10
gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposo... 50 7e-10
gb|AAG44340.1|AF233002_1 reverse transcriptase-like protein, par... 52 8e-10
gb|ACZ81617.1| reverse transcriptase, partial [Fragaria x ananassa] 49 1e-09
gb|ADE44144.1| reverse transcriptase, partial [Corchorus olitorius] 50 1e-09
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024... 52 1e-09
gb|ABG22118.1| polyprotein, partial [Hydrangea macrophylla] 52 1e-09
>gb|ONK76589.1| uncharacterized protein A4U43_C03F29880 [Asparagus officinalis]
Length = 305
Score = 53.9 bits (128), Expect(2) = 5e-14
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFM 273
E LVCKL K LYGLKQ P+QWYK FDGFM
Sbjct: 73 EDLVCKLKKSLYGLKQSPRQWYKRFDGFM 101
Score = 51.2 bits (121), Expect(2) = 5e-14
Identities = 27/54 (50%), Positives = 34/54 (62%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIAFRTSEAMCLRRSRHWLWTSSKL 73
TR Y CVY HKL EY+ LLLYVDDMLIAFR + +R+ + L + K+
Sbjct: 107 TRSPYDQCVYMHKLHDSEYVYLLLYVDDMLIAFR--NYLAIRKLKEGLSSEFKI 158
>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Capsicum baccatum]
Length = 1526
Score = 52.0 bits (123), Expect(2) = 1e-10
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFMTVH 264
E+ VC+L K LYGLKQ P+QWYK FD FMT H
Sbjct: 611 ENHVCRLKKSLYGLKQSPRQWYKRFDSFMTGH 642
Score = 41.2 bits (95), Expect(2) = 1e-10
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIAFR 133
+R +Y CVY KL G + LLLYVDDMLIA R
Sbjct: 645 SRSSYDNCVYFQKLSDGSLVYLLLYVDDMLIAAR 678
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 48.5 bits (114), Expect(2) = 3e-10
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFM 273
E++ CKL K LYGLKQ P+QWYK FD FM
Sbjct: 719 ENMFCKLEKSLYGLKQSPRQWYKRFDKFM 747
Score = 43.9 bits (102), Expect(2) = 3e-10
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIAFRTSE 124
TR Y CVY KL G +I LLLYVDDMLIA + E
Sbjct: 753 TRSKYDHCVYLRKLHDGSFIYLLLYVDDMLIASKNKE 789
>gb|AKM12484.1| reverse transcriptase, partial [Ixora finlaysoniana]
Length = 127
Score = 47.8 bits (112), Expect(3) = 3e-10
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFMTVH 264
E VC L K LYGLKQ P+QWYK FD FM H
Sbjct: 60 EDHVCLLKKSLYGLKQSPRQWYKRFDSFMLGH 91
Score = 42.4 bits (98), Expect(3) = 3e-10
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIA 139
TR Y +CVY KL G ++ LLLYVDDMLIA
Sbjct: 94 TRSMYDSCVYFRKLNDGSFVYLLLYVDDMLIA 125
Score = 21.6 bits (44), Expect(3) = 3e-10
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 235 YTRSLYDLCL 206
YTRS+YD C+
Sbjct: 93 YTRSMYDSCV 102
>gb|AKM12482.1| reverse transcriptase, partial [Ixora coccinea]
Length = 127
Score = 47.8 bits (112), Expect(3) = 3e-10
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFMTVH 264
E VC L K LYGLKQ P+QWYK FD FM H
Sbjct: 60 EDHVCLLKKSLYGLKQSPRQWYKRFDSFMLGH 91
Score = 42.4 bits (98), Expect(3) = 3e-10
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIA 139
TR Y +CVY KL G ++ LLLYVDDMLIA
Sbjct: 94 TRSMYDSCVYFRKLNDGSFVYLLLYVDDMLIA 125
Score = 21.6 bits (44), Expect(3) = 3e-10
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 235 YTRSLYDLCL 206
YTRS+YD C+
Sbjct: 93 YTRSMYDSCV 102
>gb|AKM12481.1| reverse transcriptase, partial [Ixora coccinea]
Length = 127
Score = 47.8 bits (112), Expect(3) = 3e-10
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFMTVH 264
E VC L K LYGLKQ P+QWYK FD FM H
Sbjct: 60 EDHVCLLKKSLYGLKQSPRQWYKRFDSFMLGH 91
Score = 42.4 bits (98), Expect(3) = 3e-10
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIA 139
TR Y +CVY KL G ++ LLLYVDDMLIA
Sbjct: 94 TRSMYDSCVYFRKLNDGSFVYLLLYVDDMLIA 125
Score = 21.6 bits (44), Expect(3) = 3e-10
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -3
Query: 235 YTRSLYDLCL 206
YTRS+YD C+
Sbjct: 93 YTRSMYDSCV 102
>gb|OMO73383.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1212
Score = 48.1 bits (113), Expect(2) = 6e-10
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFMTVHE 261
E VC L K LYGLKQ P+QWYK FD FM H+
Sbjct: 833 EDHVCLLQKFLYGLKQSPRQWYKRFDSFMVSHD 865
Score = 43.1 bits (100), Expect(2) = 6e-10
Identities = 21/31 (67%), Positives = 21/31 (67%)
Frame = -1
Query: 231 RGAYTTCVYPHKLPCGEYINLLLYVDDMLIA 139
R Y CVY KL G YI LLLYVDDMLIA
Sbjct: 868 RNQYDNCVYSKKLSDGSYIYLLLYVDDMLIA 898
>ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235647 [Nicotiana
sylvestris]
Length = 985
Score = 53.5 bits (127), Expect(2) = 6e-10
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -2
Query: 350 VCKLVKPLYGLKQLPKQWYKHFDGFMTVHE 261
VC+L K LYGLKQ P+QWYK FD FMT HE
Sbjct: 295 VCQLKKSLYGLKQSPRQWYKRFDAFMTTHE 324
Score = 37.7 bits (86), Expect(2) = 6e-10
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIA 139
+R A+ +CVY K+ I LLLYVDDMLIA
Sbjct: 326 SRSAFDSCVYHKKMSGNSMIYLLLYVDDMLIA 357
>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 502
Score = 48.1 bits (113), Expect(3) = 6e-10
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFM 273
E LVC+L K LYGLKQ P+QWYK FD +M
Sbjct: 122 EDLVCRLRKSLYGLKQSPRQWYKRFDTYM 150
Score = 40.4 bits (93), Expect(3) = 6e-10
Identities = 21/32 (65%), Positives = 21/32 (65%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIA 139
TR Y CVY H GE I LLLYVDDMLIA
Sbjct: 156 TRCLYDCCVYYHVFEDGEIILLLLYVDDMLIA 187
Score = 21.9 bits (45), Expect(3) = 6e-10
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 253 YDLCLLYTRSLYDLCL 206
Y L + YTR LYD C+
Sbjct: 149 YMLKIGYTRCLYDCCV 164
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 49.3 bits (116), Expect(2) = 7e-10
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = -2
Query: 350 VCKLVKPLYGLKQLPKQWYKHFDGFMTVHE 261
VC L K LYGLKQ P+QWYK FD FM HE
Sbjct: 1258 VCFLKKSLYGLKQSPRQWYKRFDAFMVSHE 1287
Score = 41.6 bits (96), Expect(2) = 7e-10
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -1
Query: 231 RGAYTTCVYPHKLPCGEYINLLLYVDDMLIA 139
R Y +CVY LP G +I LLLYVDDMLIA
Sbjct: 1290 RNQYDSCVYFKTLPDGSFIYLLLYVDDMLIA 1320
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 49.3 bits (116), Expect(2) = 7e-10
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = -2
Query: 350 VCKLVKPLYGLKQLPKQWYKHFDGFMTVHE 261
VC L K LYGLKQ P+QWYK FD FM HE
Sbjct: 1057 VCFLKKSLYGLKQSPRQWYKRFDAFMVSHE 1086
Score = 41.6 bits (96), Expect(2) = 7e-10
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -1
Query: 231 RGAYTTCVYPHKLPCGEYINLLLYVDDMLIA 139
R Y +CVY LP G +I LLLYVDDMLIA
Sbjct: 1089 RNQYDSCVYFKTLPDGSFIYLLLYVDDMLIA 1119
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 49.7 bits (117), Expect(2) = 7e-10
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFM 273
E LVC+L K LYGLKQ P+QWYK FD FM
Sbjct: 651 EHLVCQLKKSLYGLKQAPRQWYKKFDSFM 679
Score = 41.2 bits (95), Expect(2) = 7e-10
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIAFR 133
+R Y C+Y + P G +I LLLYVDDMLIA R
Sbjct: 685 SRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASR 718
>gb|KYP72919.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 865
Score = 49.7 bits (117), Expect(2) = 7e-10
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFM 273
E LVC+L K LYGLKQ P+QWYK FD FM
Sbjct: 524 EHLVCQLKKSLYGLKQAPRQWYKKFDSFM 552
Score = 41.2 bits (95), Expect(2) = 7e-10
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIAFR 133
+R Y C+Y + P G +I LLLYVDDMLIA R
Sbjct: 558 SRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASR 591
>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 49.7 bits (117), Expect(2) = 7e-10
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFM 273
E LVC+L K LYGLKQ P+QWYK FD FM
Sbjct: 122 EHLVCQLKKSLYGLKQAPRQWYKKFDSFM 150
Score = 41.2 bits (95), Expect(2) = 7e-10
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIAFR 133
+R Y C+Y + P G +I LLLYVDDMLIA R
Sbjct: 156 SRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASR 189
>gb|KYP42039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 394
Score = 49.7 bits (117), Expect(2) = 7e-10
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFM 273
E LVC+L K LYGLKQ P+QWYK FD FM
Sbjct: 13 EHLVCQLKKSLYGLKQAPRQWYKKFDSFM 41
Score = 41.2 bits (95), Expect(2) = 7e-10
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIAFR 133
+R Y C+Y + P G +I LLLYVDDMLIA R
Sbjct: 47 SRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASR 80
>gb|AAG44340.1|AF233002_1 reverse transcriptase-like protein, partial [Amaranthus quitensis]
Length = 95
Score = 51.6 bits (122), Expect(2) = 8e-10
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFM 273
ESLVC+L K LYGLKQ P+QWYK FD FM
Sbjct: 31 ESLVCRLRKSLYGLKQSPRQWYKRFDSFM 59
Score = 39.3 bits (90), Expect(2) = 8e-10
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDM 148
+R +Y CVY KL G+YI LLLYVDDM
Sbjct: 65 SRSSYDCCVYIRKLRGGDYIYLLLYVDDM 93
>gb|ACZ81617.1| reverse transcriptase, partial [Fragaria x ananassa]
Length = 89
Score = 49.3 bits (116), Expect(3) = 1e-09
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFM 273
E+LVC+L K LYGLKQ PKQWYK FD +M
Sbjct: 26 ENLVCRLRKSLYGLKQSPKQWYKSFDTYM 54
Score = 38.9 bits (89), Expect(3) = 1e-09
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDML 145
TR Y CVY H GE+I LLLYVDDML
Sbjct: 60 TRCLYDCCVYYHVFEDGEFILLLLYVDDML 89
Score = 21.9 bits (45), Expect(3) = 1e-09
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 253 YDLCLLYTRSLYDLCL 206
Y L + YTR LYD C+
Sbjct: 53 YMLKIGYTRCLYDCCV 68
>gb|ADE44144.1| reverse transcriptase, partial [Corchorus olitorius]
Length = 89
Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFMTVHE 261
E VC L K LYGLKQ PKQWYK FD FM H+
Sbjct: 26 EDHVCLLQKSLYGLKQSPKQWYKRFDSFMVSHD 58
Score = 40.0 bits (92), Expect(2) = 1e-09
Identities = 19/29 (65%), Positives = 19/29 (65%)
Frame = -1
Query: 231 RGAYTTCVYPHKLPCGEYINLLLYVDDML 145
R Y CVY KL G YI LLLYVDDML
Sbjct: 61 RNQYDNCVYSKKLSDGSYIYLLLYVDDML 89
>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
Length = 1892
Score = 52.4 bits (124), Expect(2) = 1e-09
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFMTVH 264
E VC+L K LYGLKQ P+QWYK FD FMT H
Sbjct: 1518 EDHVCQLKKSLYGLKQSPRQWYKRFDAFMTTH 1549
Score = 37.7 bits (86), Expect(2) = 1e-09
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -1
Query: 234 TRGAYTTCVYPHKLPCGEYINLLLYVDDMLIA 139
+R A+ +CVY K+ I LLLYVDDMLIA
Sbjct: 1552 SRSAFDSCVYHKKMSGNSMIYLLLYVDDMLIA 1583
>gb|ABG22118.1| polyprotein, partial [Hydrangea macrophylla]
Length = 351
Score = 52.0 bits (123), Expect(2) = 1e-09
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = -2
Query: 359 ESLVCKLVKPLYGLKQLPKQWYKHFDGFMTVH 264
E LVCKL K LYGLKQ P+QWY+ FD FM H
Sbjct: 29 EHLVCKLKKSLYGLKQAPRQWYRKFDSFMVGH 60
Score = 38.1 bits (87), Expect(2) = 1e-09
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -1
Query: 231 RGAYTTCVYPHKLPCGEYINLLLYVDDMLI 142
R A CVY K P G ++ LLLYVDDMLI
Sbjct: 64 RTAAYQCVYVQKFPDGNFVMLLLYVDDMLI 93