BLASTX nr result

ID: Ophiopogon26_contig00035790 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00035790
         (713 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG27377.1| putative photosystem I PsaA/PsaB [Helianthus annuus]    43   4e-08
gb|OTG21157.1| putative photosystem I PsaA/PsaB [Helianthus annuus]    43   4e-08
gb|PHU25161.1| Photosystem I chlorophyll a apoprotein A1 [Capsic...    43   1e-06
gb|PHU30037.1| Photosystem I chlorophyll a apoprotein A1 [Capsic...    41   1e-06
gb|OTF84557.1| putative photosystem I PsaA/PsaB [Helianthus annuus]    43   2e-06
gb|OTG34908.1| putative photosystem I PsaA/PsaB [Helianthus annuus]    43   2e-06

>gb|OTG27377.1| putative photosystem I PsaA/PsaB [Helianthus annuus]
          Length = 1386

 Score = 43.1 bits (100), Expect(2) = 4e-08
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = -2

Query: 625 CSMDTKHPCFSTWHNSSWHNKKY 557
           CSMDTKHP FSTW N SW N K+
Sbjct: 419 CSMDTKHPRFSTWCNGSWCNSKH 441



 Score = 42.7 bits (99), Expect(2) = 4e-08
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -3

Query: 543 GGDELVAVGGKVVLLSIPLGTADF 472
           GG +LVAVGGKV LL IPLGTADF
Sbjct: 446 GGGDLVAVGGKVALLPIPLGTADF 469


>gb|OTG21157.1| putative photosystem I PsaA/PsaB [Helianthus annuus]
          Length = 1378

 Score = 43.1 bits (100), Expect(2) = 4e-08
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = -2

Query: 625 CSMDTKHPCFSTWHNSSWHNKKY 557
           CSMDTKHP FSTW N SW N K+
Sbjct: 411 CSMDTKHPRFSTWCNGSWCNSKH 433



 Score = 42.7 bits (99), Expect(2) = 4e-08
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -3

Query: 543 GGDELVAVGGKVVLLSIPLGTADF 472
           GG +LVAVGGKV LL IPLGTADF
Sbjct: 438 GGGDLVAVGGKVALLPIPLGTADF 461


>gb|PHU25161.1| Photosystem I chlorophyll a apoprotein A1 [Capsicum chinense]
          Length = 635

 Score = 42.7 bits (99), Expect(2) = 1e-06
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 616 DTKHPCFSTWHNSSWHNKKY 557
           DTKHPCFSTW N SW+N K+
Sbjct: 294 DTKHPCFSTWCNGSWYNNKH 313



 Score = 38.5 bits (88), Expect(2) = 1e-06
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = -3

Query: 534 ELVAVGGKVVLLSIPLGTADF 472
           +LVAVGGKV LL IPLGTADF
Sbjct: 342 DLVAVGGKVALLPIPLGTADF 362


>gb|PHU30037.1| Photosystem I chlorophyll a apoprotein A1 [Capsicum chinense]
          Length = 547

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = -2

Query: 622 SMDTKHPCFSTWHNSSWHNKKY 557
           + DTKHPCFSTW N SW N K+
Sbjct: 347 NFDTKHPCFSTWCNGSWCNSKH 368



 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 19/24 (79%), Positives = 19/24 (79%)
 Frame = -3

Query: 543 GGDELVAVGGKVVLLSIPLGTADF 472
           G  EL AVGGKV LL IPLGTADF
Sbjct: 373 GDGELAAVGGKVALLPIPLGTADF 396


>gb|OTF84557.1| putative photosystem I PsaA/PsaB [Helianthus annuus]
          Length = 109

 Score = 42.7 bits (99), Expect(2) = 2e-06
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -3

Query: 543 GGDELVAVGGKVVLLSIPLGTADF 472
           GG +LVAVGGKV LL IPLGTADF
Sbjct: 26  GGGDLVAVGGKVALLPIPLGTADF 49



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = -2

Query: 619 MDTKHPCFSTWHNSSWHNKKY 557
           MDTKHP FSTW N SW N K+
Sbjct: 1   MDTKHPRFSTWCNGSWCNSKH 21


>gb|OTG34908.1| putative photosystem I PsaA/PsaB [Helianthus annuus]
          Length = 207

 Score = 42.7 bits (99), Expect(2) = 2e-06
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -3

Query: 543 GGDELVAVGGKVVLLSIPLGTADF 472
           GG +LVAVGGKV LL IPLGTADF
Sbjct: 85  GGGDLVAVGGKVALLPIPLGTADF 108



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = -2

Query: 625 CSMDTKHPCFSTWHNSSWHNKKY 557
           C MDTKH  FSTW N SW N K+
Sbjct: 57  CLMDTKHSRFSTWCNGSWCNSKH 79


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