BLASTX nr result
ID: Ophiopogon26_contig00035741
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00035741
(702 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011074352.1| polyadenylation and cleavage factor homolog ... 140 2e-34
ref|XP_011074351.1| polyadenylation and cleavage factor homolog ... 140 2e-34
ref|XP_011074350.1| polyadenylation and cleavage factor homolog ... 140 2e-34
gb|KMZ58597.1| hypothetical protein ZOSMA_75G00300 [Zostera marina] 140 3e-34
ref|XP_016683609.1| PREDICTED: polyadenylation and cleavage fact... 138 9e-34
ref|XP_016683608.1| PREDICTED: polyadenylation and cleavage fact... 138 9e-34
gb|PPD72215.1| hypothetical protein GOBAR_DD30889 [Gossypium bar... 138 9e-34
gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium r... 138 1e-33
gb|PIN12436.1| mRNA cleavage and polyadenylation factor I/II com... 138 1e-33
ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage fact... 138 1e-33
gb|PPS20316.1| hypothetical protein GOBAR_AA00250 [Gossypium bar... 138 1e-33
ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage fact... 138 1e-33
gb|KJB67158.1| hypothetical protein B456_010G178200 [Gossypium r... 138 1e-33
ref|XP_022716063.1| polyadenylation and cleavage factor homolog ... 137 2e-33
ref|XP_017645983.1| PREDICTED: polyadenylation and cleavage fact... 137 2e-33
ref|XP_022716062.1| polyadenylation and cleavage factor homolog ... 137 2e-33
ref|XP_017645981.1| PREDICTED: polyadenylation and cleavage fact... 137 2e-33
ref|XP_021766922.1| polyadenylation and cleavage factor homolog ... 137 3e-33
ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage fact... 137 3e-33
ref|XP_015938301.1| polyadenylation and cleavage factor homolog ... 126 8e-33
>ref|XP_011074352.1| polyadenylation and cleavage factor homolog 4 isoform X3 [Sesamum
indicum]
Length = 940
Score = 140 bits (353), Expect = 2e-34
Identities = 80/178 (44%), Positives = 108/178 (60%), Gaps = 8/178 (4%)
Frame = -3
Query: 520 PALRDRFDAKVEEMKQR------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 359
P++ DRF A V+E ++ GP+GT EI L+ L ELT NSKP+I +LT IA
Sbjct: 36 PSILDRFRAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQ 95
Query: 358 KEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 179
+ H +GIA+AI RI+EVP++QKLPS YLLDSI+KN+G +Y YF+ RL +F + Y ++
Sbjct: 96 RAHGEGIADAICARIIEVPIDQKLPSLYLLDSIVKNIGKEYIKYFSARLPEVFCEAYAQV 155
Query: 178 SPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQ--KNHTPASSGDVRYSGSHSPHLLRG 11
P + AM HLF TW PS+ +IE LQ + SSG + S SP G
Sbjct: 156 HPSMHQAMRHLFGTWSAVFPSSVLQNIEAQLQFSPSVNGQSSGLGASTRSESPRPTHG 213
>ref|XP_011074351.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Sesamum
indicum]
Length = 964
Score = 140 bits (353), Expect = 2e-34
Identities = 80/178 (44%), Positives = 108/178 (60%), Gaps = 8/178 (4%)
Frame = -3
Query: 520 PALRDRFDAKVEEMKQR------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 359
P++ DRF A V+E ++ GP+GT EI L+ L ELT NSKP+I +LT IA
Sbjct: 36 PSILDRFRAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQ 95
Query: 358 KEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 179
+ H +GIA+AI RI+EVP++QKLPS YLLDSI+KN+G +Y YF+ RL +F + Y ++
Sbjct: 96 RAHGEGIADAICARIIEVPIDQKLPSLYLLDSIVKNIGKEYIKYFSARLPEVFCEAYAQV 155
Query: 178 SPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQ--KNHTPASSGDVRYSGSHSPHLLRG 11
P + AM HLF TW PS+ +IE LQ + SSG + S SP G
Sbjct: 156 HPSMHQAMRHLFGTWSAVFPSSVLQNIEAQLQFSPSVNGQSSGLGASTRSESPRPTHG 213
>ref|XP_011074350.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Sesamum
indicum]
Length = 967
Score = 140 bits (353), Expect = 2e-34
Identities = 80/178 (44%), Positives = 108/178 (60%), Gaps = 8/178 (4%)
Frame = -3
Query: 520 PALRDRFDAKVEEMKQR------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 359
P++ DRF A V+E ++ GP+GT EI L+ L ELT NSKP+I +LT IA
Sbjct: 36 PSILDRFRAMVKEREEELRAFGGGPLGTDEIVRLYEILLSELTINSKPIITDLTIIAGDQ 95
Query: 358 KEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 179
+ H +GIA+AI RI+EVP++QKLPS YLLDSI+KN+G +Y YF+ RL +F + Y ++
Sbjct: 96 RAHGEGIADAICARIIEVPIDQKLPSLYLLDSIVKNIGKEYIKYFSARLPEVFCEAYAQV 155
Query: 178 SPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQ--KNHTPASSGDVRYSGSHSPHLLRG 11
P + AM HLF TW PS+ +IE LQ + SSG + S SP G
Sbjct: 156 HPSMHQAMRHLFGTWSAVFPSSVLQNIEAQLQFSPSVNGQSSGLGASTRSESPRPTHG 213
>gb|KMZ58597.1| hypothetical protein ZOSMA_75G00300 [Zostera marina]
Length = 862
Score = 140 bits (352), Expect = 3e-34
Identities = 78/167 (46%), Positives = 105/167 (62%), Gaps = 3/167 (1%)
Frame = -3
Query: 514 LRDRFDAKVEEMKQR-GPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYKEHVDGI 338
L DRF ++E ++ G V EI +L+ DFL EL NSKP+I ELT IA + ++H GI
Sbjct: 16 LLDRFRETIKEKEEEFGVVDGDEIVALYEDFLEELILNSKPIITELTIIAGEQRQHARGI 75
Query: 337 ANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPA 158
A AI RI+EVPVE+KLPS YLLDSI+KN+G +Y FA R+ +F + Y ++P LRP+
Sbjct: 76 AEAICSRIIEVPVEKKLPSLYLLDSIVKNIGTEYVRCFAARIPEVFCEAYNHVNPNLRPS 135
Query: 157 MVHLFKTWGKSIPSAARDSIEDFLQ--KNHTPASSGDVRYSGSHSPH 23
M HLF TW + PS + IE+ LQ + + S G + S S H
Sbjct: 136 MRHLFGTWSQVFPSPVLEKIENELQFSSHGSKQSFGALSTRQSESQH 182
>ref|XP_016683609.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X2 [Gossypium hirsutum]
Length = 1004
Score = 138 bits (348), Expect = 9e-34
Identities = 82/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G V T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>ref|XP_016683608.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Gossypium hirsutum]
Length = 1024
Score = 138 bits (348), Expect = 9e-34
Identities = 82/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G V T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>gb|PPD72215.1| hypothetical protein GOBAR_DD30889 [Gossypium barbadense]
Length = 1030
Score = 138 bits (348), Expect = 9e-34
Identities = 82/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G V T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLHKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>gb|KJB67157.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
Length = 831
Score = 138 bits (347), Expect = 1e-33
Identities = 82/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G V T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>gb|PIN12436.1| mRNA cleavage and polyadenylation factor I/II complex, subunit
Pcf11 [Handroanthus impetiginosus]
Length = 940
Score = 138 bits (347), Expect = 1e-33
Identities = 84/182 (46%), Positives = 107/182 (58%), Gaps = 12/182 (6%)
Frame = -3
Query: 520 PALRDRFDAKVEEMKQ------RG---PVGTPEITSLFGDFLLELTRNSKPLIMELTAIA 368
P + DRF A V+E ++ RG P+ T EI L+ L ELT NSKP+I +LT IA
Sbjct: 36 PLILDRFRAMVKEREEELRVFGRGAVLPLNTDEIVRLYEIMLSELTINSKPIITDLTIIA 95
Query: 367 AKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTY 188
+ + H +GIA+AI RI+EVPV+QKLPS YLLDSI+KN+G Y YF+ RL +F + Y
Sbjct: 96 GEQRAHAEGIADAICARIIEVPVDQKLPSLYLLDSIVKNIGKDYVRYFSARLPEVFCEAY 155
Query: 187 KKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHTPA---SSGDVRYSGSHSPHLL 17
++ P + PAM HLF TW PS+ IE L K PA SSG S SP
Sbjct: 156 AQVHPNMHPAMRHLFGTWSAVFPSSVLQKIEAQL-KRSAPANGRSSGLSSSRDSESPGQT 214
Query: 16 RG 11
G
Sbjct: 215 HG 216
>ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Gossypium raimondii]
Length = 1001
Score = 138 bits (347), Expect = 1e-33
Identities = 82/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G V T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>gb|PPS20316.1| hypothetical protein GOBAR_AA00250 [Gossypium barbadense]
Length = 1004
Score = 138 bits (347), Expect = 1e-33
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G + T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLGKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Gossypium raimondii]
gb|KJB67156.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
Length = 1004
Score = 138 bits (347), Expect = 1e-33
Identities = 82/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G V T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>gb|KJB67158.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
Length = 1024
Score = 138 bits (347), Expect = 1e-33
Identities = 82/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G V T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>ref|XP_022716063.1| polyadenylation and cleavage factor homolog 4-like isoform X2
[Durio zibethinus]
Length = 1001
Score = 137 bits (346), Expect = 2e-33
Identities = 80/185 (43%), Positives = 108/185 (58%), Gaps = 15/185 (8%)
Frame = -3
Query: 520 PALRDRFDAKVEEMKQRGPVG-------------TPEITSLFGDFLLELTRNSKPLIMEL 380
P++ +RF A +E+ + V T EI L+ L ELT NSKP+I +L
Sbjct: 11 PSILERFKALLEQREDELKVSSGGGDHEVGASPSTEEIVQLYEAVLSELTFNSKPIITDL 70
Query: 379 TAIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIF 200
T IA + +EH +GIA+AI RIVEVPV+QKLPS YLLDSI+KN+ +Y YF+ RL +F
Sbjct: 71 TIIAGEQREHGEGIADAICARIVEVPVDQKLPSLYLLDSIVKNIDREYVRYFSSRLPEVF 130
Query: 199 IDTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQ--KNHTPASSGDVRYSGSHSP 26
+ Y++++P L PAM HLF TW P + IE LQ ++ P SSG + S SP
Sbjct: 131 CEAYRRVNPHLHPAMRHLFGTWSTVFPPSVLRQIEMQLQFSQSANPQSSGVTSFRSSESP 190
Query: 25 HLLRG 11
G
Sbjct: 191 RPTHG 195
>ref|XP_017645983.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Gossypium arboreum]
Length = 1001
Score = 137 bits (346), Expect = 2e-33
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G + T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>ref|XP_022716062.1| polyadenylation and cleavage factor homolog 4-like isoform X1
[Durio zibethinus]
Length = 1004
Score = 137 bits (346), Expect = 2e-33
Identities = 80/185 (43%), Positives = 108/185 (58%), Gaps = 15/185 (8%)
Frame = -3
Query: 520 PALRDRFDAKVEEMKQRGPVG-------------TPEITSLFGDFLLELTRNSKPLIMEL 380
P++ +RF A +E+ + V T EI L+ L ELT NSKP+I +L
Sbjct: 11 PSILERFKALLEQREDELKVSSGGGDHEVGASPSTEEIVQLYEAVLSELTFNSKPIITDL 70
Query: 379 TAIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIF 200
T IA + +EH +GIA+AI RIVEVPV+QKLPS YLLDSI+KN+ +Y YF+ RL +F
Sbjct: 71 TIIAGEQREHGEGIADAICARIVEVPVDQKLPSLYLLDSIVKNIDREYVRYFSSRLPEVF 130
Query: 199 IDTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQ--KNHTPASSGDVRYSGSHSP 26
+ Y++++P L PAM HLF TW P + IE LQ ++ P SSG + S SP
Sbjct: 131 CEAYRRVNPHLHPAMRHLFGTWSTVFPPSVLRQIEMQLQFSQSANPQSSGVTSFRSSESP 190
Query: 25 HLLRG 11
G
Sbjct: 191 RPTHG 195
>ref|XP_017645981.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Gossypium arboreum]
gb|KHG24664.1| Pre-mRNA cleavage complex 2 Pcf11 [Gossypium arboreum]
Length = 1004
Score = 137 bits (346), Expect = 2e-33
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 14/184 (7%)
Frame = -3
Query: 520 PALRDRFDA----KVEEMKQRGPVG--------TPEITSLFGDFLLELTRNSKPLIMELT 377
P++ +RF A + +E++ G + T EI L+ L ELT NSKP+I +LT
Sbjct: 13 PSISERFKALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELTFNSKPIITDLT 72
Query: 376 AIAAKYKEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 197
IA + +EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YF+ RL +F
Sbjct: 73 IIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFC 132
Query: 196 DTYKKLSPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHT--PASSGDVRYSGSHSPH 23
+ Y++++P L PAM HLF TW P + IE LQ + T SSG S SP
Sbjct: 133 EAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSESPR 192
Query: 22 LLRG 11
G
Sbjct: 193 PTHG 196
>ref|XP_021766922.1| polyadenylation and cleavage factor homolog 4-like [Chenopodium
quinoa]
Length = 939
Score = 137 bits (344), Expect = 3e-33
Identities = 70/151 (46%), Positives = 99/151 (65%), Gaps = 4/151 (2%)
Frame = -3
Query: 466 PVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYKEHVDGIANAILDRIVEVPVEQKL 287
P EI + + D L ELT NSKP+I +LT IA + +EH +GIA+AI R++EVPV+QK+
Sbjct: 45 PPSMAEIVTFYEDVLSELTFNSKPIITDLTIIAGEQREHAEGIADAICARVLEVPVDQKM 104
Query: 286 PSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKLSPCLRPAMVHLFKTWGKSIPSAAR 107
PS YLLDSI+KN+G +Y +FA RL +F + Y+++ P L P+M HLF+TW PS+
Sbjct: 105 PSLYLLDSIVKNIGREYARHFASRLPEVFCEVYRQVPPNLYPSMRHLFRTWSTVFPSSVL 164
Query: 106 DSIEDFLQ----KNHTPASSGDVRYSGSHSP 26
+IED LQ +N ++ +R S S P
Sbjct: 165 STIEDELQFSPRENQPSSNLASMRASESPRP 195
>ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Nelumbo nucifera]
Length = 1071
Score = 137 bits (344), Expect = 3e-33
Identities = 79/160 (49%), Positives = 101/160 (63%)
Frame = -3
Query: 538 EKFEARPALRDRFDAKVEEMKQRGPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 359
EKF A R+ + +V + P T EI L+ L ELT NSKP+I ELT IA +
Sbjct: 51 EKFRALLKEREE-EMRVSDDDDVPPPSTEEIVRLYEVVLSELTFNSKPIITELTIIAGEQ 109
Query: 358 KEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 179
+EH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YFA RL +F + Y+++
Sbjct: 110 REHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYARYFASRLPEVFCEAYRQV 169
Query: 178 SPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHTPASS 59
P L PAM HLF TW P+ IE LQ +PAS+
Sbjct: 170 QPNLYPAMRHLFGTWSTVFPTKVLRKIEVELQ--FSPASN 207
>ref|XP_015938301.1| polyadenylation and cleavage factor homolog 4-like [Arachis
duranensis]
Length = 179
Score = 126 bits (317), Expect = 8e-33
Identities = 73/161 (45%), Positives = 94/161 (58%), Gaps = 8/161 (4%)
Frame = -3
Query: 514 LRDRFDAKVEEMKQR--------GPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 359
L DRF A +++ P T EI L+ L ELT N K +I +LT IA
Sbjct: 14 LVDRFKAMLKQRDDELRATAGHVSPPSTEEIVQLYEMLLSELTSNQKLIINDLTFIAVHQ 73
Query: 358 KEHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYKKL 179
EH GIA+AI RI++VP EQKLPS YLLDSI+KN G++Y YFA RL +F + Y+++
Sbjct: 74 SEHARGIADAICARILKVPAEQKLPSLYLLDSIVKNFGEEYVEYFALRLPEVFCEAYRQV 133
Query: 178 SPCLRPAMVHLFKTWGKSIPSAARDSIEDFLQKNHTPASSG 56
P L PAM HLF TW + P +A IE LQ + A+ G
Sbjct: 134 QPHLHPAMHHLFGTWSEVFPPSALRKIEAELQLSQVTAAVG 174