BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00035704
         (573 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK61925.1| uncharacterized protein A4U43_C08F34980 [Asparagu...   149   7e-41
ref|XP_020102032.1| pentatricopeptide repeat-containing protein ...    84   1e-15
gb|PKU87927.1| Pentatricopeptide repeat-containing protein [Dend...    80   4e-14
ref|XP_020691344.1| pentatricopeptide repeat-containing protein ...    80   4e-14
ref|XP_020582981.1| pentatricopeptide repeat-containing protein ...    78   3e-13
ref|XP_010909359.1| PREDICTED: pentatricopeptide repeat-containi...    76   9e-13
gb|PKA65612.1| Protein Rf1, mitochondrial [Apostasia shenzhenica]      76   1e-12
ref|XP_008777992.1| PREDICTED: putative pentatricopeptide repeat...    75   3e-12
ref|XP_018684570.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
ref|XP_009409010.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
ref|XP_010255177.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
gb|ERN14364.1| hypothetical protein AMTR_s00033p00222240 [Ambore...    66   3e-09
ref|XP_006852897.2| putative pentatricopeptide repeat-containing...    66   4e-09
ref|XP_019174103.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
emb|CDY51169.1| BnaCnng20350D [Brassica napus]                         56   7e-06
ref|XP_013720094.1| pentatricopeptide repeat-containing protein ...    56   7e-06
pdb|5I9D|A Chain A, Crystal Structure Of Designed Pentatricopept...    56   7e-06

>gb|ONK61925.1| uncharacterized protein A4U43_C08F34980 [Asparagus officinalis]
          Length = 284

 Score =  149 bits (375), Expect = 7e-41
 Identities = 76/112 (67%), Positives = 87/112 (77%), Gaps = 5/112 (4%)
 Frame = +2

Query: 2   ETYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNL 181
           ETYS+MI KFLEKGEV+I +S+LDE+  K  KAGVDLY  IVRGL+KCGRV+E  KW+N 
Sbjct: 173 ETYSVMIGKFLEKGEVDIGVSLLDEMRAKNLKAGVDLYCDIVRGLYKCGRVEEGEKWMNA 232

Query: 182 MIEKGILVSYEGWESLYDSVTME-----GELWKAIEANYNEANESERRRVKR 322
           MI  GILVSYE WESLYDSV ME     GELWK IEAN  +A E E+RR+KR
Sbjct: 233 MIGNGILVSYESWESLYDSVIMEGDREIGELWKEIEANC-KAREDEKRRLKR 283


>ref|XP_020102032.1| pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Ananas comosus]
          Length = 478

 Score = 84.3 bits (207), Expect = 1e-15
 Identities = 41/79 (51%), Positives = 54/79 (68%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TY +MI   L KG+   +I++LDE+  KK +A V LYS IVR L++ G ++ES K+LN M
Sbjct: 396 TYELMIFGLLNKGDTTAAIALLDEMTKKKIRADVRLYSAIVRRLYEDGAIEESNKYLNRM 455

Query: 185 IEKGILVSYEGWESLYDSV 241
           IE GIL SY  WE L DS+
Sbjct: 456 IENGILASYSAWEGLVDSM 474


>gb|PKU87927.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 562

 Score = 80.1 bits (196), Expect = 4e-14
 Identities = 38/80 (47%), Positives = 55/80 (68%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TY++MI  FL  G +E + ++L+E+  +KF A VDLY  +VR LH CGR  E+  +LN M
Sbjct: 462 TYAIMINGFLRVGMIEKATTVLEEMRREKFAASVDLYLVLVRNLHLCGRSKEALGYLNYM 521

Query: 185 IEKGILVSYEGWESLYDSVT 244
           IE G+ VSY  WE +++S+T
Sbjct: 522 IENGVFVSYTQWEVMFESLT 541


>ref|XP_020691344.1| pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Dendrobium catenatum]
          Length = 562

 Score = 80.1 bits (196), Expect = 4e-14
 Identities = 38/80 (47%), Positives = 55/80 (68%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TY++MI  FL  G +E + ++L+E+  +KF A VDLY  +VR LH CGR  E+  +LN M
Sbjct: 462 TYAIMINGFLRVGMIEKATTVLEEMRREKFAASVDLYLVLVRNLHLCGRSKEALGYLNYM 521

Query: 185 IEKGILVSYEGWESLYDSVT 244
           IE G+ VSY  WE +++S+T
Sbjct: 522 IENGVFVSYTQWEVMFESLT 541


>ref|XP_020582981.1| pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial-like [Phalaenopsis equestris]
          Length = 559

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 37/80 (46%), Positives = 54/80 (67%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TY++MI   +  G VE +  I +E+  +KF A VDLY  +VR LH CGR  E++++LN M
Sbjct: 461 TYAIMIHVLVRMGMVEKATGIFEEMRREKFAASVDLYGVLVRNLHFCGRSKEAQEYLNYM 520

Query: 185 IEKGILVSYEGWESLYDSVT 244
           IE G+ VSY  WE L++S++
Sbjct: 521 IENGVFVSYAQWEVLFESLS 540


>ref|XP_010909359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63400-like [Elaeis guineensis]
          Length = 539

 Score = 76.3 bits (186), Expect = 9e-13
 Identities = 37/84 (44%), Positives = 53/84 (63%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TYS+MI  FL+KG+   +IS+L+++  +K      L S +    H  G+ +E   +LN M
Sbjct: 449 TYSVMIHGFLKKGDGMTAISLLEDMAREKMPVNFSLCSAVALSFHAQGKFEELNSYLNKM 508

Query: 185 IEKGILVSYEGWESLYDSVTMEGE 256
           IE GILVSY  WESL++SVT+  E
Sbjct: 509 IENGILVSYAAWESLFESVTIRNE 532


>gb|PKA65612.1| Protein Rf1, mitochondrial [Apostasia shenzhenica]
          Length = 565

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 34/73 (46%), Positives = 53/73 (72%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           ++S++I + L + EVE + ++++E+V +KF+AGVDLY  +V  L  CGR +E+  +LN M
Sbjct: 480 SFSIVIHQLLSRREVEKARNVVEEMVRRKFQAGVDLYCELVNSLQSCGRFEEANYYLNSM 539

Query: 185 IEKGILVSYEGWE 223
           IE G+LVSY  WE
Sbjct: 540 IESGVLVSYSQWE 552


>ref|XP_008777992.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Phoenix dactylifera]
          Length = 541

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 35/85 (41%), Positives = 54/85 (63%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TYS+MI  FL KG++  +IS+L+++  +K      L SG+   +H  G ++    +LN M
Sbjct: 450 TYSVMIHGFLRKGDIMTAISLLEDMAREKMPVSFSLCSGVALSIHAQGELELLHDYLNKM 509

Query: 185 IEKGILVSYEGWESLYDSVTMEGEL 259
           IE GILVSY  WE L++S+T+  E+
Sbjct: 510 IENGILVSYAAWELLFESMTIRNEV 534


>ref|XP_018684570.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 536

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 30/84 (35%), Positives = 56/84 (66%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TYS+MI  +L +G+  +++S ++++  +K +  V L++ +VR L+  G+++E+  ++N M
Sbjct: 439 TYSLMIHGYLGRGDTAMAVSFVEQMEREKMQVDVGLHTSVVRSLYTTGKLEETHHYMNKM 498

Query: 185 IEKGILVSYEGWESLYDSVTMEGE 256
           IE G +VSY  WE   +S+TM  E
Sbjct: 499 IESGTIVSYAEWEEFVNSMTMRIE 522


>ref|XP_009409010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62720-like isoform X1 [Musa acuminata subsp.
           malaccensis]
 ref|XP_018684569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62720-like isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 580

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 30/84 (35%), Positives = 56/84 (66%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TYS+MI  +L +G+  +++S ++++  +K +  V L++ +VR L+  G+++E+  ++N M
Sbjct: 483 TYSLMIHGYLGRGDTAMAVSFVEQMEREKMQVDVGLHTSVVRSLYTTGKLEETHHYMNKM 542

Query: 185 IEKGILVSYEGWESLYDSVTMEGE 256
           IE G +VSY  WE   +S+TM  E
Sbjct: 543 IESGTIVSYAEWEEFVNSMTMRIE 566


>ref|XP_010255177.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Nelumbo nucifera]
          Length = 564

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/84 (40%), Positives = 51/84 (60%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TY + +    E+GE+  ++ + DE++ KK      +Y  I+RGL  CGR++E+  +LN M
Sbjct: 474 TYVVFVNGLCEQGELTNALLVFDEMLEKKIPVNGTIYEVILRGLCTCGRIEEAHMYLNKM 533

Query: 185 IEKGILVSYEGWESLYDSVTMEGE 256
           IE G LVSY  W+ L DSV +  E
Sbjct: 534 IENGHLVSYSRWKVLLDSVFVGNE 557


>gb|ERN14364.1| hypothetical protein AMTR_s00033p00222240 [Amborella trichopoda]
          Length = 349

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TYS+M+    E G +  ++ I  E++  K      LY  I+RGL K G   E+   LN M
Sbjct: 245 TYSIMVTGLCENGHLSKALCIFQEMINNKVPVNGSLYDIIIRGLCKIGSFQEAHMLLNEM 304

Query: 185 IEKGILVSYEGWESLYDS-VTMEGE 256
           IE G L SY GW SL DS + ++GE
Sbjct: 305 IENGYLASYLGWSSLVDSMLELDGE 329


>ref|XP_006852897.2| putative pentatricopeptide repeat-containing protein At1g12700,
           mitochondrial [Amborella trichopoda]
          Length = 514

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TYS+M+    E G +  ++ I  E++  K      LY  I+RGL K G   E+   LN M
Sbjct: 410 TYSIMVTGLCENGHLSKALCIFQEMINNKVPVNGSLYDIIIRGLCKIGSFQEAHMLLNEM 469

Query: 185 IEKGILVSYEGWESLYDS-VTMEGE 256
           IE G L SY GW SL DS + ++GE
Sbjct: 470 IENGYLASYLGWSSLVDSMLELDGE 494


>ref|XP_019174103.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Ipomoea nil]
          Length = 542

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/75 (37%), Positives = 45/75 (60%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TY  MI  +  +G V  ++ +LDE++ +K      LY+ I+ GL  CGRV+++ ++ N M
Sbjct: 454 TYGTMINGYCNEGNVSKAVRLLDEMLSRKMSVNQTLYAMIIGGLCACGRVEQALQYFNAM 513

Query: 185 IEKGILVSYEGWESL 229
           +E G  VS +  ESL
Sbjct: 514 VENGHAVSGKRCESL 528


>emb|CDY51169.1| BnaCnng20350D [Brassica napus]
          Length = 423

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 34/95 (35%), Positives = 53/95 (55%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TYS++I    + G +E ++S+ +E+  K  KA V  Y+ +V G    GR D+  + L  M
Sbjct: 53  TYSIIIDSLCKDGSLEEALSLFNEMETKGIKADVTTYNSLVGGFCNAGRQDDGAQLLRDM 112

Query: 185 IEKGILVSYEGWESLYDSVTMEGELWKAIEANYNE 289
           I +GI  +   + +L DS   EG+L +A E  YNE
Sbjct: 113 ITRGITPNVITFSALIDSFVKEGKLKEAKEL-YNE 146


>ref|XP_013720094.1| pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like, partial [Brassica napus]
          Length = 427

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 34/95 (35%), Positives = 53/95 (55%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TYS++I    + G +E ++S+ +E+  K  KA V  Y+ +V G    GR D+  + L  M
Sbjct: 57  TYSIIIDSLCKDGSLEEALSLFNEMETKGIKADVTTYNSLVGGFCNAGRQDDGAQLLRDM 116

Query: 185 IEKGILVSYEGWESLYDSVTMEGELWKAIEANYNE 289
           I +GI  +   + +L DS   EG+L +A E  YNE
Sbjct: 117 ITRGITPNVITFSALIDSFVKEGKLKEAKEL-YNE 150


>pdb|5I9D|A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
          Length = 460

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 29/90 (32%), Positives = 53/90 (58%)
 Frame = +2

Query: 5   TYSMMIAKFLEKGEVEISISILDELVGKKFKAGVDLYSGIVRGLHKCGRVDESRKWLNLM 184
           TYS +I    + G+++ ++ + +E+V K  K  V  YS ++ GL K G++DE+ K    M
Sbjct: 193 TYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEM 252

Query: 185 IEKGILVSYEGWESLYDSVTMEGELWKAIE 274
           +EKGI  +   + +L D +   G+L +A++
Sbjct: 253 VEKGIKPNVVTYNTLIDGLCKAGKLDEALK 282