BLASTX nr result

ID: Ophiopogon26_contig00035569 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00035569
         (557 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008793618.1| PREDICTED: F-box/FBD/LRR-repeat protein At3g...    70   1e-10
ref|XP_020251999.1| F-box/LRR-repeat protein At4g14103-like [Asp...    61   1e-07
gb|EAY75600.1| hypothetical protein OsI_03505 [Oryza sativa Indi...    55   4e-06

>ref|XP_008793618.1| PREDICTED: F-box/FBD/LRR-repeat protein At3g26920-like [Phoenix
           dactylifera]
          Length = 455

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
 Frame = -2

Query: 544 ISLLLEMAPNITDLDLSLRCLM--------GPDGCD-----------------LFKLLMN 440
           ++++LE AP +  + ++   L           DGC                  L + LM 
Sbjct: 225 LNIVLENAPRLASVTVNFAYLFYDGSWRNNDEDGCSHDRWYPNDEDEESEVSRLIRFLMQ 284

Query: 439 IPRIELLNLVYHHCEDLPPLVKEKIQLPQCLPTGHLLRNLRALFLSFCLADADLFPILSC 260
           +  IE L L +    ++  L +E + LP+ LP+GH L NL+ L LS    D     IL+C
Sbjct: 285 LSHIESLTLKFPLPYNMR-LDRENVSLPKSLPSGHFLMNLKKLDLSMHFDDKYFLLILTC 343

Query: 259 LFNSCPNLYKLLIVHD-CNGVMSGIDGAYWEKHQVADCMKHHLSFVDL 119
           L NS PNL +L++  D  NG     +  YW+K    +C+++ LS   L
Sbjct: 344 LLNSSPNLRELIVRQDKPNGCAKLAEADYWDKQIPPECVRNQLSTATL 391


>ref|XP_020251999.1| F-box/LRR-repeat protein At4g14103-like [Asparagus officinalis]
 gb|ONK81616.1| uncharacterized protein A4U43_C01F31140 [Asparagus officinalis]
          Length = 443

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
 Frame = -2

Query: 424 LLNLVYHHCEDLPPLVK-EKIQLPQCLPTGHLLRNLRALFLSFCLADADLFPILSCLFNS 248
           L  L  H C D    ++ ++ + P  LP  + L++++ L +   L++  L  +LSCL NS
Sbjct: 281 LERLSLHFCTDFAECLQWQRAEFPLSLPPQYHLKSVKKLDMEISLSNHQLATVLSCLLNS 340

Query: 247 CPNLYKLLIVHDCNGVMSGIDGAYWEKHQVADCMKHHLSFVDLQSVDLNVQ--------- 95
           CPNL +L I  D   + +   G+YWE    + C+ ++L  + +  V+L            
Sbjct: 341 CPNLRELRI-KDKEHLHT--IGSYWEGQNPSWCLINNLRTIQICKVNLRQSYWMGFIKFL 397

Query: 94  -----------------PSLVELVENELRHLQWASSHAVLKFEP 14
                            P   +LVE +L+ +QW S  A+L+ +P
Sbjct: 398 LMNACVCERITIQYYGDPCSKKLVEQKLKMIQWGSPQAILELKP 441


>gb|EAY75600.1| hypothetical protein OsI_03505 [Oryza sativa Indica Group]
          Length = 185

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = -2

Query: 382 LVKEKIQLPQCLPTGHLLRNLRALFLSFCLADADLFPILSCLFNSCPNLYKLLIVHDCNG 203
           L K KI +P+ LP    L  L+ L L+       L  ++SCL NS PNL  L I+   + 
Sbjct: 20  LSKTKIAVPRMLPKKCCLLGLQKLTLALDHNHEALARLVSCLLNSSPNLKDLEIMDPFDI 79

Query: 202 VMSG-IDGAYWEKHQVADCMKHHLSFV 125
             SG +   +WEKH  ADC+++HLS V
Sbjct: 80  RYSGHLAAEFWEKHITADCIQNHLSVV 106


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