BLASTX nr result

ID: Ophiopogon26_contig00035494 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00035494
         (559 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020274811.1| heterogeneous nuclear ribonucleoprotein 1-li...    63   2e-08
ref|XP_020274344.1| RNA-binding protein Musashi homolog 2-like [...    58   1e-06

>ref|XP_020274811.1| heterogeneous nuclear ribonucleoprotein 1-like [Asparagus
           officinalis]
 gb|ONK64845.1| uncharacterized protein A4U43_C07F30580 [Asparagus officinalis]
          Length = 380

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 39/64 (60%)
 Frame = +1

Query: 7   FNVGFGGYAGMTAAGFRGYAWSXXXXXXXXXXXXXXTDNSVRITDDSTGIDDVGNEKLDD 186
           FNVGFGGY+GM + G+ GY WS              TDN VRIT+ S G +DVG+EKL+ 
Sbjct: 324 FNVGFGGYSGMPSVGYHGYVWS-------GDDKSNPTDNDVRITNHSNGTEDVGSEKLES 376

Query: 187 *QTA 198
            Q +
Sbjct: 377 PQVS 380


>ref|XP_020274344.1| RNA-binding protein Musashi homolog 2-like [Asparagus officinalis]
 ref|XP_020274345.1| RNA-binding protein Musashi homolog 2-like [Asparagus officinalis]
 gb|ONK64843.1| uncharacterized protein A4U43_C07F30560 [Asparagus officinalis]
          Length = 372

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/66 (45%), Positives = 39/66 (59%)
 Frame = +1

Query: 1   GYFNVGFGGYAGMTAAGFRGYAWSXXXXXXXXXXXXXXTDNSVRITDDSTGIDDVGNEKL 180
           GY NVGFGGY GM   G+ GY  S              TD+ VRITD S+G ++VG+EKL
Sbjct: 314 GYANVGFGGYTGMANVGYNGYTLS-------SNDKSNLTDDDVRITDHSSGTEEVGSEKL 366

Query: 181 DD*QTA 198
           ++ Q +
Sbjct: 367 ENQQVS 372


Top