BLASTX nr result

ID: Ophiopogon26_contig00035154 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00035154
         (616 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF25532.1| conserved hypothetical protein [Ricinus communis]...    74   7e-14
dbj|GAV61910.1| hypothetical protein CFOL_v3_05435, partial [Cep...    59   2e-08

>gb|EEF25532.1| conserved hypothetical protein [Ricinus communis]
 gb|EEF26949.1| conserved hypothetical protein [Ricinus communis]
          Length = 88

 Score = 73.9 bits (180), Expect = 7e-14
 Identities = 36/50 (72%), Positives = 43/50 (86%), Gaps = 2/50 (4%)
 Frame = -3

Query: 272 RAPALLAFFTGARQMYHSSRS*--GKESSVCFHYYGNELHMLVSNCSGIY 129
           ++ ALLAFFTGAR+MYHSSRS   GKESSVC++ YG+E HMLV NCSGI+
Sbjct: 39  KSSALLAFFTGARRMYHSSRSPRSGKESSVCYNLYGDESHMLVENCSGIH 88


>dbj|GAV61910.1| hypothetical protein CFOL_v3_05435, partial [Cephalotus
           follicularis]
          Length = 41

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = -3

Query: 272 RAPALLAFFTGARQMYHSSRS*GKESSVCFHYYGNELHMLVSNCSGIY 129
           ++ ALLAFFTGAR+MYHSSR           +YGNE HMLV NCSGI+
Sbjct: 2   KSSALLAFFTGARRMYHSSRR--------IFFYGNESHMLVENCSGIH 41


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